Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_12730 and NIAGMN_12735 overlap by 50 nucleotides NIAGMN_12735 and NIAGMN_12740 are separated by 149 nucleotides NIAGMN_12740 and yidC are separated by 105 nucleotides
NIAGMN_12730: NIAGMN_12730 - toxin, at 2,524,988 to 2,526,976
_12730
NIAGMN_12735: NIAGMN_12735 - hypothetical protein, at 2,526,927 to 2,527,157
_12735
NIAGMN_12740: NIAGMN_12740 - tRNA modification GTPase MnmE, at 2,527,307 to 2,528,671
_12740
NIAGMN_12745: yidC - membrane protein insertase YidC, at 2,528,777 to 2,530,423
yidC
Position (kb)
2527
2528
2529 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2526.460 kb on + strand, within NIAGMN_12730 at 2526.618 kb on + strand, within NIAGMN_12730 at 2526.619 kb on - strand, within NIAGMN_12730 at 2526.643 kb on + strand, within NIAGMN_12730 at 2526.745 kb on + strand, within NIAGMN_12730 at 2526.765 kb on - strand, within NIAGMN_12730 at 2526.807 kb on + strand at 2526.808 kb on - strand at 2526.931 kb on + strand at 2526.931 kb on + strand at 2526.932 kb on - strand at 2526.932 kb on - strand at 2526.932 kb on - strand at 2526.933 kb on + strand at 2526.934 kb on - strand at 2527.043 kb on - strand, within NIAGMN_12735 at 2527.045 kb on + strand, within NIAGMN_12735 at 2527.155 kb on + strand at 2527.199 kb on + strand at 2527.199 kb on + strand at 2527.200 kb on - strand at 2527.228 kb on - strand at 2527.255 kb on + strand at 2527.259 kb on + strand at 2527.260 kb on - strand at 2527.289 kb on + strand at 2527.289 kb on + strand at 2527.290 kb on - strand at 2527.290 kb on - strand at 2527.290 kb on - strand at 2527.290 kb on - strand at 2527.300 kb on - strand at 2527.308 kb on + strand at 2527.308 kb on + strand at 2527.308 kb on + strand at 2527.309 kb on - strand at 2527.309 kb on - strand at 2527.309 kb on - strand at 2527.309 kb on - strand at 2527.309 kb on - strand at 2527.309 kb on - strand at 2527.313 kb on - strand at 2528.653 kb on + strand at 2528.755 kb on - strand at 2528.856 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,526,460 + NIAGMN_12730 0.74 -0.6 2,526,618 + NIAGMN_12730 0.82 -0.2 2,526,619 - NIAGMN_12730 0.82 +0.9 2,526,643 + NIAGMN_12730 0.83 +0.5 2,526,745 + NIAGMN_12730 0.88 +0.1 2,526,765 - NIAGMN_12730 0.89 +1.4 2,526,807 + +0.1 2,526,808 - +1.7 2,526,931 + -0.9 2,526,931 + +0.1 2,526,932 - -3.3 2,526,932 - +0.7 2,526,932 - +0.4 2,526,933 + +0.4 2,526,934 - -0.1 2,527,043 - NIAGMN_12735 0.50 +0.5 2,527,045 + NIAGMN_12735 0.51 +0.8 2,527,155 + +0.5 2,527,199 + +0.1 2,527,199 + -0.8 2,527,200 - -0.3 2,527,228 - +0.1 2,527,255 + -0.0 2,527,259 + +1.4 2,527,260 - -0.2 2,527,289 + -1.7 2,527,289 + +0.6 2,527,290 - +0.9 2,527,290 - +0.2 2,527,290 - -1.3 2,527,290 - +2.3 2,527,300 - +0.4 2,527,308 + -0.1 2,527,308 + -1.0 2,527,308 + +1.1 2,527,309 - +0.7 2,527,309 - -3.4 2,527,309 - +0.3 2,527,309 - +0.2 2,527,309 - +0.1 2,527,309 - +0.6 2,527,313 - -0.4 2,528,653 + +0.1 2,528,755 - -1.0 2,528,856 - +0.8
Or see this region's nucleotide sequence