Strain Fitness in Escherichia coli ECRC102 around NIAGMN_11270

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt23S_rrna and Glu_trna are separated by 193 nucleotidesGlu_trna and 16S_rrna are separated by 85 nucleotides16S_rrna and murI are separated by 376 nucleotides NIAGMN_11255: 23S_rrna - 23S ribosomal RNA, at 2,220,997 to 2,223,901 _rrna NIAGMN_11265: Glu_trna - tRNA-Glu(ttc), at 2,224,095 to 2,224,170 _trna NIAGMN_11270: 16S_rrna - 16S ribosomal RNA, at 2,224,256 to 2,225,797 _rrna NIAGMN_11275: murI - glutamate racemase, at 2,226,174 to 2,227,031 murI Position (kb) 2224 2225 2226Strain fitness (log2 ratio) -1 0 1at 2226.181 kb on - strandat 2226.181 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,226,181 - +1.2
2,226,181 - +0.1

Or see this region's nucleotide sequence