Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fklB and ytfB are separated by 217 nucleotides ytfB and insQ are separated by 134 nucleotides insQ and tnpA are separated by 67 nucleotides
NIAGMN_09925: fklB - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,955,455 to 1,956,075
fklB
NIAGMN_09930: ytfB - cell division protein YtfB, at 1,956,293 to 1,956,931
ytfB
NIAGMN_09935: insQ - Putative RNA-guided DNA endonuclease InsQ, at 1,957,066 to 1,958,214
insQ
NIAGMN_09940: tnpA - IS200/IS605-like element IS609 family transposase, at 1,958,282 to 1,958,713
tnpA
Position (kb)
1957
1958
1959 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1956.078 kb on + strand at 1956.078 kb on + strand at 1956.078 kb on + strand at 1956.078 kb on + strand at 1956.079 kb on - strand at 1956.090 kb on + strand at 1956.095 kb on + strand at 1956.096 kb on - strand at 1956.097 kb on + strand at 1956.098 kb on - strand at 1956.098 kb on - strand at 1956.098 kb on - strand at 1956.098 kb on - strand at 1956.102 kb on + strand at 1956.114 kb on + strand at 1956.115 kb on - strand at 1956.115 kb on - strand at 1956.136 kb on - strand at 1956.184 kb on + strand at 1956.185 kb on - strand at 1956.185 kb on - strand at 1956.198 kb on - strand at 1956.203 kb on + strand at 1956.203 kb on + strand at 1956.203 kb on + strand at 1956.204 kb on - strand at 1956.206 kb on - strand at 1956.206 kb on - strand at 1956.208 kb on + strand at 1956.208 kb on + strand at 1956.208 kb on + strand at 1956.208 kb on + strand at 1956.209 kb on - strand at 1956.220 kb on + strand at 1956.234 kb on + strand at 1956.235 kb on - strand at 1956.240 kb on + strand at 1956.245 kb on + strand at 1956.246 kb on - strand at 1956.251 kb on + strand at 1956.251 kb on + strand at 1956.251 kb on + strand at 1956.257 kb on - strand at 1956.400 kb on + strand, within ytfB at 1956.400 kb on + strand, within ytfB at 1956.414 kb on + strand, within ytfB at 1956.415 kb on - strand, within ytfB at 1956.415 kb on - strand, within ytfB at 1956.449 kb on - strand, within ytfB at 1956.487 kb on - strand, within ytfB at 1956.490 kb on + strand, within ytfB at 1956.491 kb on - strand, within ytfB at 1956.491 kb on - strand, within ytfB at 1956.540 kb on + strand, within ytfB at 1956.540 kb on + strand, within ytfB at 1956.540 kb on + strand, within ytfB at 1956.540 kb on + strand, within ytfB at 1956.541 kb on - strand, within ytfB at 1956.541 kb on - strand, within ytfB at 1956.541 kb on - strand, within ytfB at 1956.592 kb on + strand, within ytfB at 1956.592 kb on + strand, within ytfB at 1956.592 kb on + strand, within ytfB at 1956.592 kb on + strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.593 kb on - strand, within ytfB at 1956.656 kb on - strand, within ytfB at 1956.683 kb on + strand, within ytfB at 1956.683 kb on + strand, within ytfB at 1956.684 kb on - strand, within ytfB at 1956.752 kb on + strand, within ytfB at 1956.752 kb on + strand, within ytfB at 1956.753 kb on - strand, within ytfB at 1956.753 kb on - strand, within ytfB at 1956.753 kb on - strand, within ytfB at 1956.768 kb on + strand, within ytfB at 1956.769 kb on - strand, within ytfB at 1956.793 kb on + strand, within ytfB at 1956.794 kb on - strand, within ytfB at 1956.916 kb on + strand at 1956.916 kb on + strand at 1956.980 kb on + strand at 1956.980 kb on + strand at 1956.980 kb on + strand at 1956.980 kb on + strand at 1956.980 kb on + strand at 1956.980 kb on + strand at 1956.981 kb on - strand at 1956.981 kb on - strand at 1956.981 kb on - strand at 1956.981 kb on - strand at 1956.981 kb on - strand at 1957.013 kb on + strand at 1957.013 kb on + strand at 1957.014 kb on - strand at 1957.014 kb on - strand at 1957.062 kb on - strand at 1957.170 kb on + strand at 1957.200 kb on + strand, within insQ at 1957.200 kb on + strand, within insQ at 1957.200 kb on + strand, within insQ at 1957.200 kb on + strand, within insQ at 1957.200 kb on + strand, within insQ at 1957.201 kb on - strand, within insQ at 1957.201 kb on - strand, within insQ at 1957.203 kb on - strand, within insQ at 1957.228 kb on - strand, within insQ at 1957.258 kb on - strand, within insQ at 1957.258 kb on - strand, within insQ at 1957.529 kb on + strand, within insQ at 1957.529 kb on + strand, within insQ at 1957.529 kb on + strand, within insQ at 1957.542 kb on + strand, within insQ at 1957.621 kb on + strand, within insQ at 1957.622 kb on - strand, within insQ at 1957.789 kb on - strand, within insQ at 1957.796 kb on + strand, within insQ at 1957.796 kb on + strand, within insQ at 1957.796 kb on + strand, within insQ at 1957.796 kb on + strand, within insQ at 1957.797 kb on - strand, within insQ at 1957.797 kb on - strand, within insQ at 1957.797 kb on - strand, within insQ at 1958.286 kb on + strand at 1958.423 kb on + strand, within tnpA at 1958.711 kb on + strand at 1958.969 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,956,078 + -0.6 1,956,078 + -0.0 1,956,078 + +1.9 1,956,078 + -0.1 1,956,079 - -0.6 1,956,090 + -0.5 1,956,095 + -0.5 1,956,096 - -1.0 1,956,097 + -0.2 1,956,098 - -0.1 1,956,098 - -1.8 1,956,098 - -0.2 1,956,098 - +0.4 1,956,102 + -0.2 1,956,114 + +1.9 1,956,115 - +0.5 1,956,115 - +0.5 1,956,136 - +0.0 1,956,184 + +0.4 1,956,185 - -0.8 1,956,185 - +0.2 1,956,198 - -1.0 1,956,203 + +0.6 1,956,203 + +0.7 1,956,203 + -0.1 1,956,204 - +0.3 1,956,206 - -0.5 1,956,206 - -0.2 1,956,208 + -0.1 1,956,208 + -0.2 1,956,208 + +1.0 1,956,208 + -1.7 1,956,209 - -0.3 1,956,220 + -0.2 1,956,234 + -0.7 1,956,235 - +1.2 1,956,240 + +0.5 1,956,245 + +1.4 1,956,246 - -0.5 1,956,251 + -0.1 1,956,251 + -0.6 1,956,251 + +0.1 1,956,257 - -1.9 1,956,400 + ytfB NIAGMN_09930 0.17 -0.2 1,956,400 + ytfB NIAGMN_09930 0.17 +0.8 1,956,414 + ytfB NIAGMN_09930 0.19 +1.3 1,956,415 - ytfB NIAGMN_09930 0.19 -1.7 1,956,415 - ytfB NIAGMN_09930 0.19 +0.6 1,956,449 - ytfB NIAGMN_09930 0.24 -0.9 1,956,487 - ytfB NIAGMN_09930 0.30 +1.2 1,956,490 + ytfB NIAGMN_09930 0.31 -0.1 1,956,491 - ytfB NIAGMN_09930 0.31 -1.2 1,956,491 - ytfB NIAGMN_09930 0.31 -0.6 1,956,540 + ytfB NIAGMN_09930 0.39 +0.3 1,956,540 + ytfB NIAGMN_09930 0.39 -1.3 1,956,540 + ytfB NIAGMN_09930 0.39 +1.3 1,956,540 + ytfB NIAGMN_09930 0.39 +0.4 1,956,541 - ytfB NIAGMN_09930 0.39 -0.7 1,956,541 - ytfB NIAGMN_09930 0.39 -0.9 1,956,541 - ytfB NIAGMN_09930 0.39 -0.2 1,956,592 + ytfB NIAGMN_09930 0.47 -1.6 1,956,592 + ytfB NIAGMN_09930 0.47 -1.0 1,956,592 + ytfB NIAGMN_09930 0.47 -1.6 1,956,592 + ytfB NIAGMN_09930 0.47 +0.3 1,956,593 - ytfB NIAGMN_09930 0.47 +0.1 1,956,593 - ytfB NIAGMN_09930 0.47 +0.4 1,956,593 - ytfB NIAGMN_09930 0.47 +0.5 1,956,593 - ytfB NIAGMN_09930 0.47 +2.2 1,956,593 - ytfB NIAGMN_09930 0.47 +0.1 1,956,593 - ytfB NIAGMN_09930 0.47 +0.1 1,956,593 - ytfB NIAGMN_09930 0.47 +0.7 1,956,593 - ytfB NIAGMN_09930 0.47 +0.3 1,956,593 - ytfB NIAGMN_09930 0.47 -1.5 1,956,656 - ytfB NIAGMN_09930 0.57 -2.0 1,956,683 + ytfB NIAGMN_09930 0.61 +0.1 1,956,683 + ytfB NIAGMN_09930 0.61 -1.0 1,956,684 - ytfB NIAGMN_09930 0.61 +1.4 1,956,752 + ytfB NIAGMN_09930 0.72 +0.4 1,956,752 + ytfB NIAGMN_09930 0.72 +0.0 1,956,753 - ytfB NIAGMN_09930 0.72 -0.1 1,956,753 - ytfB NIAGMN_09930 0.72 -0.6 1,956,753 - ytfB NIAGMN_09930 0.72 +0.2 1,956,768 + ytfB NIAGMN_09930 0.74 +0.1 1,956,769 - ytfB NIAGMN_09930 0.74 -0.5 1,956,793 + ytfB NIAGMN_09930 0.78 +0.5 1,956,794 - ytfB NIAGMN_09930 0.78 +1.0 1,956,916 + -0.2 1,956,916 + -0.5 1,956,980 + +0.2 1,956,980 + -0.4 1,956,980 + +1.3 1,956,980 + -0.1 1,956,980 + +0.3 1,956,980 + +0.2 1,956,981 - +0.3 1,956,981 - +0.1 1,956,981 - -0.8 1,956,981 - +0.3 1,956,981 - -0.3 1,957,013 + -0.4 1,957,013 + +0.2 1,957,014 - +0.5 1,957,014 - -0.4 1,957,062 - -0.2 1,957,170 + +0.4 1,957,200 + insQ NIAGMN_09935 0.12 +0.9 1,957,200 + insQ NIAGMN_09935 0.12 -0.4 1,957,200 + insQ NIAGMN_09935 0.12 -0.3 1,957,200 + insQ NIAGMN_09935 0.12 -0.9 1,957,200 + insQ NIAGMN_09935 0.12 +0.0 1,957,201 - insQ NIAGMN_09935 0.12 +0.2 1,957,201 - insQ NIAGMN_09935 0.12 +0.3 1,957,203 - insQ NIAGMN_09935 0.12 -0.8 1,957,228 - insQ NIAGMN_09935 0.14 +0.6 1,957,258 - insQ NIAGMN_09935 0.17 +0.7 1,957,258 - insQ NIAGMN_09935 0.17 +0.3 1,957,529 + insQ NIAGMN_09935 0.40 -0.9 1,957,529 + insQ NIAGMN_09935 0.40 +0.9 1,957,529 + insQ NIAGMN_09935 0.40 -0.4 1,957,542 + insQ NIAGMN_09935 0.41 +1.8 1,957,621 + insQ NIAGMN_09935 0.48 +1.3 1,957,622 - insQ NIAGMN_09935 0.48 -0.8 1,957,789 - insQ NIAGMN_09935 0.63 -0.4 1,957,796 + insQ NIAGMN_09935 0.64 +0.7 1,957,796 + insQ NIAGMN_09935 0.64 +0.7 1,957,796 + insQ NIAGMN_09935 0.64 -1.3 1,957,796 + insQ NIAGMN_09935 0.64 +1.0 1,957,797 - insQ NIAGMN_09935 0.64 +2.3 1,957,797 - insQ NIAGMN_09935 0.64 +0.4 1,957,797 - insQ NIAGMN_09935 0.64 +0.1 1,958,286 + +0.8 1,958,423 + tnpA NIAGMN_09940 0.33 -0.1 1,958,711 + +0.1 1,958,969 - -0.9
Or see this region's nucleotide sequence