Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_09570 and NIAGMN_09575 are separated by 151 nucleotides NIAGMN_09575 and spoIVCA are separated by 198 nucleotides spoIVCA and NIAGMN_09585 are separated by 192 nucleotides
NIAGMN_09570: NIAGMN_09570 - hypothetical protein, at 1,884,273 to 1,885,046
_09570
NIAGMN_09575: NIAGMN_09575 - hypothetical protein, at 1,885,198 to 1,886,514
_09575
NIAGMN_09580: spoIVCA - resolvase, at 1,886,713 to 1,887,282
spoIVCA
NIAGMN_09585: NIAGMN_09585 - DUF1643 domain-containing protein, at 1,887,475 to 1,887,942
_09585
Position (kb)
1885
1886
1887 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1884.224 kb on + strand at 1884.224 kb on + strand at 1884.224 kb on + strand at 1884.224 kb on + strand at 1884.225 kb on - strand at 1884.225 kb on - strand at 1884.225 kb on - strand at 1884.225 kb on - strand at 1884.234 kb on + strand at 1884.267 kb on - strand at 1884.290 kb on + strand at 1884.290 kb on + strand at 1884.290 kb on + strand at 1884.291 kb on - strand at 1884.291 kb on - strand at 1884.329 kb on + strand at 1884.329 kb on + strand at 1884.330 kb on - strand at 1884.330 kb on - strand at 1884.330 kb on - strand at 1884.330 kb on - strand at 1884.334 kb on + strand at 1884.335 kb on - strand at 1884.357 kb on + strand, within NIAGMN_09570 at 1884.357 kb on + strand, within NIAGMN_09570 at 1884.358 kb on - strand, within NIAGMN_09570 at 1884.358 kb on - strand, within NIAGMN_09570 at 1884.358 kb on - strand, within NIAGMN_09570 at 1884.358 kb on - strand, within NIAGMN_09570 at 1884.470 kb on + strand, within NIAGMN_09570 at 1884.471 kb on - strand, within NIAGMN_09570 at 1884.494 kb on - strand, within NIAGMN_09570 at 1884.503 kb on + strand, within NIAGMN_09570 at 1884.504 kb on - strand, within NIAGMN_09570 at 1884.504 kb on - strand, within NIAGMN_09570 at 1884.510 kb on + strand, within NIAGMN_09570 at 1884.510 kb on + strand, within NIAGMN_09570 at 1884.510 kb on + strand, within NIAGMN_09570 at 1884.511 kb on - strand, within NIAGMN_09570 at 1884.511 kb on - strand, within NIAGMN_09570 at 1884.525 kb on + strand, within NIAGMN_09570 at 1884.526 kb on - strand, within NIAGMN_09570 at 1884.558 kb on - strand, within NIAGMN_09570 at 1884.561 kb on - strand, within NIAGMN_09570 at 1884.561 kb on - strand, within NIAGMN_09570 at 1884.561 kb on - strand, within NIAGMN_09570 at 1884.599 kb on + strand, within NIAGMN_09570 at 1884.599 kb on + strand, within NIAGMN_09570 at 1884.599 kb on + strand, within NIAGMN_09570 at 1884.600 kb on - strand, within NIAGMN_09570 at 1884.602 kb on - strand, within NIAGMN_09570 at 1884.602 kb on - strand, within NIAGMN_09570 at 1884.607 kb on + strand, within NIAGMN_09570 at 1884.607 kb on + strand, within NIAGMN_09570 at 1884.608 kb on - strand, within NIAGMN_09570 at 1884.640 kb on - strand, within NIAGMN_09570 at 1884.640 kb on - strand, within NIAGMN_09570 at 1884.667 kb on - strand, within NIAGMN_09570 at 1884.779 kb on + strand, within NIAGMN_09570 at 1884.779 kb on + strand, within NIAGMN_09570 at 1884.780 kb on - strand, within NIAGMN_09570 at 1884.951 kb on + strand, within NIAGMN_09570 at 1884.952 kb on - strand, within NIAGMN_09570 at 1884.954 kb on - strand, within NIAGMN_09570 at 1884.969 kb on + strand at 1884.970 kb on - strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.973 kb on + strand at 1884.974 kb on - strand at 1884.974 kb on - strand at 1884.974 kb on - strand at 1884.974 kb on - strand at 1884.974 kb on - strand at 1884.974 kb on - strand at 1884.974 kb on - strand at 1885.014 kb on + strand at 1885.014 kb on + strand at 1885.015 kb on - strand at 1885.016 kb on + strand at 1885.016 kb on + strand at 1885.017 kb on - strand at 1885.020 kb on + strand at 1885.021 kb on - strand at 1885.021 kb on - strand at 1885.022 kb on + strand at 1885.025 kb on + strand at 1885.025 kb on + strand at 1885.025 kb on + strand at 1885.025 kb on + strand at 1885.025 kb on + strand at 1885.026 kb on - strand at 1885.026 kb on - strand at 1885.031 kb on + strand at 1885.032 kb on - strand at 1885.052 kb on + strand at 1885.053 kb on - strand at 1885.069 kb on + strand at 1885.070 kb on - strand at 1885.070 kb on - strand at 1885.070 kb on - strand at 1885.088 kb on + strand at 1885.108 kb on + strand at 1885.108 kb on + strand at 1885.116 kb on + strand at 1885.116 kb on + strand at 1885.117 kb on - strand at 1885.117 kb on - strand at 1885.117 kb on - strand at 1885.117 kb on - strand at 1885.117 kb on - strand at 1885.119 kb on - strand at 1885.119 kb on - strand at 1885.141 kb on - strand at 1885.144 kb on + strand at 1885.144 kb on + strand at 1885.144 kb on + strand at 1885.145 kb on - strand at 1885.145 kb on - strand at 1885.145 kb on - strand at 1885.147 kb on - strand at 1885.165 kb on + strand at 1885.166 kb on - strand at 1885.186 kb on + strand at 1885.186 kb on + strand at 1885.186 kb on + strand at 1885.186 kb on + strand at 1885.187 kb on - strand at 1885.212 kb on + strand at 1885.212 kb on + strand at 1885.213 kb on - strand at 1885.218 kb on - strand at 1885.312 kb on + strand at 1885.320 kb on + strand at 1885.320 kb on + strand at 1885.320 kb on + strand at 1885.321 kb on - strand at 1885.394 kb on - strand, within NIAGMN_09575 at 1885.425 kb on + strand, within NIAGMN_09575 at 1885.426 kb on - strand, within NIAGMN_09575 at 1885.435 kb on + strand, within NIAGMN_09575 at 1885.460 kb on + strand, within NIAGMN_09575 at 1885.460 kb on + strand, within NIAGMN_09575 at 1885.512 kb on + strand, within NIAGMN_09575 at 1885.578 kb on - strand, within NIAGMN_09575 at 1885.580 kb on + strand, within NIAGMN_09575 at 1885.604 kb on - strand, within NIAGMN_09575 at 1885.735 kb on + strand, within NIAGMN_09575 at 1885.755 kb on - strand, within NIAGMN_09575 at 1885.766 kb on + strand, within NIAGMN_09575 at 1885.766 kb on + strand, within NIAGMN_09575 at 1885.767 kb on - strand, within NIAGMN_09575 at 1885.831 kb on + strand, within NIAGMN_09575 at 1885.831 kb on + strand, within NIAGMN_09575 at 1885.835 kb on + strand, within NIAGMN_09575 at 1885.953 kb on - strand, within NIAGMN_09575 at 1885.995 kb on - strand, within NIAGMN_09575 at 1885.995 kb on - strand, within NIAGMN_09575 at 1886.004 kb on + strand, within NIAGMN_09575 at 1886.051 kb on - strand, within NIAGMN_09575 at 1886.064 kb on + strand, within NIAGMN_09575 at 1886.139 kb on + strand, within NIAGMN_09575 at 1886.177 kb on + strand, within NIAGMN_09575 at 1886.178 kb on - strand, within NIAGMN_09575 at 1886.198 kb on + strand, within NIAGMN_09575 at 1886.198 kb on + strand, within NIAGMN_09575 at 1886.202 kb on + strand, within NIAGMN_09575 at 1886.226 kb on - strand, within NIAGMN_09575 at 1886.238 kb on + strand, within NIAGMN_09575 at 1886.238 kb on + strand, within NIAGMN_09575 at 1886.238 kb on + strand, within NIAGMN_09575 at 1886.238 kb on + strand, within NIAGMN_09575 at 1886.239 kb on - strand, within NIAGMN_09575 at 1886.239 kb on - strand, within NIAGMN_09575 at 1886.240 kb on + strand, within NIAGMN_09575 at 1886.240 kb on + strand, within NIAGMN_09575 at 1886.240 kb on + strand, within NIAGMN_09575 at 1886.252 kb on + strand, within NIAGMN_09575 at 1886.252 kb on + strand, within NIAGMN_09575 at 1886.252 kb on + strand, within NIAGMN_09575 at 1886.333 kb on + strand, within NIAGMN_09575 at 1886.333 kb on + strand, within NIAGMN_09575 at 1886.353 kb on + strand, within NIAGMN_09575 at 1886.353 kb on + strand, within NIAGMN_09575 at 1886.369 kb on + strand, within NIAGMN_09575 at 1886.369 kb on + strand, within NIAGMN_09575 at 1886.369 kb on + strand, within NIAGMN_09575 at 1886.369 kb on + strand, within NIAGMN_09575 at 1886.393 kb on + strand at 1886.393 kb on + strand at 1886.393 kb on + strand at 1886.394 kb on - strand at 1886.394 kb on - strand at 1886.394 kb on - strand at 1886.437 kb on + strand at 1886.437 kb on + strand at 1886.437 kb on + strand at 1886.437 kb on + strand at 1886.438 kb on - strand at 1886.438 kb on - strand at 1886.455 kb on - strand at 1886.459 kb on + strand at 1886.477 kb on + strand at 1886.590 kb on + strand at 1886.611 kb on + strand at 1886.611 kb on + strand at 1886.611 kb on + strand at 1886.612 kb on - strand at 1886.670 kb on + strand at 1886.670 kb on + strand at 1886.671 kb on - strand at 1886.671 kb on - strand at 1886.679 kb on + strand at 1886.694 kb on - strand at 1886.705 kb on + strand at 1886.705 kb on + strand at 1886.706 kb on - strand at 1886.709 kb on + strand at 1886.710 kb on - strand at 1886.711 kb on + strand at 1886.712 kb on - strand at 1886.787 kb on + strand, within spoIVCA at 1886.787 kb on + strand, within spoIVCA at 1886.882 kb on - strand, within spoIVCA at 1886.895 kb on + strand, within spoIVCA at 1886.896 kb on - strand, within spoIVCA at 1886.896 kb on - strand, within spoIVCA at 1886.941 kb on + strand, within spoIVCA at 1886.941 kb on + strand, within spoIVCA at 1887.006 kb on + strand, within spoIVCA at 1887.006 kb on + strand, within spoIVCA at 1887.091 kb on + strand, within spoIVCA at 1887.091 kb on + strand, within spoIVCA at 1887.091 kb on + strand, within spoIVCA at 1887.092 kb on - strand, within spoIVCA at 1887.092 kb on - strand, within spoIVCA at 1887.092 kb on - strand, within spoIVCA at 1887.092 kb on - strand, within spoIVCA at 1887.172 kb on + strand, within spoIVCA at 1887.173 kb on - strand, within spoIVCA at 1887.282 kb on + strand at 1887.282 kb on + strand at 1887.283 kb on - strand at 1887.283 kb on - strand at 1887.355 kb on + strand at 1887.420 kb on + strand at 1887.420 kb on + strand at 1887.421 kb on - strand at 1887.440 kb on + strand at 1887.440 kb on + strand at 1887.440 kb on + strand at 1887.461 kb on + strand at 1887.462 kb on - strand at 1887.462 kb on - strand at 1887.462 kb on - strand at 1887.480 kb on + strand at 1887.511 kb on + strand at 1887.512 kb on - strand at 1887.512 kb on - strand at 1887.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,884,224 + -0.0 1,884,224 + +0.9 1,884,224 + -1.2 1,884,224 + -0.7 1,884,225 - +1.1 1,884,225 - +0.8 1,884,225 - -0.3 1,884,225 - -0.7 1,884,234 + +0.8 1,884,267 - -0.7 1,884,290 + +0.4 1,884,290 + -0.9 1,884,290 + -2.2 1,884,291 - +0.1 1,884,291 - -2.0 1,884,329 + -0.9 1,884,329 + -0.5 1,884,330 - -0.1 1,884,330 - -0.0 1,884,330 - +0.3 1,884,330 - -0.4 1,884,334 + +0.3 1,884,335 - +0.2 1,884,357 + NIAGMN_09570 0.11 +0.0 1,884,357 + NIAGMN_09570 0.11 +0.2 1,884,358 - NIAGMN_09570 0.11 +0.8 1,884,358 - NIAGMN_09570 0.11 -0.2 1,884,358 - NIAGMN_09570 0.11 -0.2 1,884,358 - NIAGMN_09570 0.11 -1.2 1,884,470 + NIAGMN_09570 0.25 -0.7 1,884,471 - NIAGMN_09570 0.26 +0.2 1,884,494 - NIAGMN_09570 0.29 +0.9 1,884,503 + NIAGMN_09570 0.30 -0.2 1,884,504 - NIAGMN_09570 0.30 +0.1 1,884,504 - NIAGMN_09570 0.30 -1.4 1,884,510 + NIAGMN_09570 0.31 -0.1 1,884,510 + NIAGMN_09570 0.31 +0.2 1,884,510 + NIAGMN_09570 0.31 -0.7 1,884,511 - NIAGMN_09570 0.31 +0.4 1,884,511 - NIAGMN_09570 0.31 +0.4 1,884,525 + NIAGMN_09570 0.33 +0.5 1,884,526 - NIAGMN_09570 0.33 +0.2 1,884,558 - NIAGMN_09570 0.37 -0.5 1,884,561 - NIAGMN_09570 0.37 -0.5 1,884,561 - NIAGMN_09570 0.37 +0.7 1,884,561 - NIAGMN_09570 0.37 +0.2 1,884,599 + NIAGMN_09570 0.42 -1.0 1,884,599 + NIAGMN_09570 0.42 +0.1 1,884,599 + NIAGMN_09570 0.42 +0.1 1,884,600 - NIAGMN_09570 0.42 -0.4 1,884,602 - NIAGMN_09570 0.43 -0.3 1,884,602 - NIAGMN_09570 0.43 +2.6 1,884,607 + NIAGMN_09570 0.43 +0.9 1,884,607 + NIAGMN_09570 0.43 +0.3 1,884,608 - NIAGMN_09570 0.43 +0.0 1,884,640 - NIAGMN_09570 0.47 +0.2 1,884,640 - NIAGMN_09570 0.47 +0.5 1,884,667 - NIAGMN_09570 0.51 -1.3 1,884,779 + NIAGMN_09570 0.65 -0.1 1,884,779 + NIAGMN_09570 0.65 -0.4 1,884,780 - NIAGMN_09570 0.66 -0.5 1,884,951 + NIAGMN_09570 0.88 +0.2 1,884,952 - NIAGMN_09570 0.88 -1.9 1,884,954 - NIAGMN_09570 0.88 -0.5 1,884,969 + +0.2 1,884,970 - +0.5 1,884,973 + -0.4 1,884,973 + -0.6 1,884,973 + +0.5 1,884,973 + -0.9 1,884,973 + +0.8 1,884,973 + -0.3 1,884,973 + +0.0 1,884,973 + +0.3 1,884,974 - -1.7 1,884,974 - +0.3 1,884,974 - +1.1 1,884,974 - -0.2 1,884,974 - +0.9 1,884,974 - +0.7 1,884,974 - -1.8 1,885,014 + +0.6 1,885,014 + -0.4 1,885,015 - +1.2 1,885,016 + -1.4 1,885,016 + +0.0 1,885,017 - -2.0 1,885,020 + +0.2 1,885,021 - +0.3 1,885,021 - -0.0 1,885,022 + -0.3 1,885,025 + -0.3 1,885,025 + -0.5 1,885,025 + +0.2 1,885,025 + +0.4 1,885,025 + +1.6 1,885,026 - -0.5 1,885,026 - -0.3 1,885,031 + -2.5 1,885,032 - +0.5 1,885,052 + -0.2 1,885,053 - -0.7 1,885,069 + +0.5 1,885,070 - -0.5 1,885,070 - +0.3 1,885,070 - +0.9 1,885,088 + -2.6 1,885,108 + -0.7 1,885,108 + -3.4 1,885,116 + +0.1 1,885,116 + -0.1 1,885,117 - -1.5 1,885,117 - +0.3 1,885,117 - -0.1 1,885,117 - +0.1 1,885,117 - +1.2 1,885,119 - +1.0 1,885,119 - +1.6 1,885,141 - +1.1 1,885,144 + +0.6 1,885,144 + -2.2 1,885,144 + +0.5 1,885,145 - -0.8 1,885,145 - +0.6 1,885,145 - +1.2 1,885,147 - -0.8 1,885,165 + -0.5 1,885,166 - +0.0 1,885,186 + -0.5 1,885,186 + +0.7 1,885,186 + +0.0 1,885,186 + -1.1 1,885,187 - +0.3 1,885,212 + -0.6 1,885,212 + -2.2 1,885,213 - +0.9 1,885,218 - +0.8 1,885,312 + -0.2 1,885,320 + +0.4 1,885,320 + +0.7 1,885,320 + +0.3 1,885,321 - -0.1 1,885,394 - NIAGMN_09575 0.15 +1.5 1,885,425 + NIAGMN_09575 0.17 +2.0 1,885,426 - NIAGMN_09575 0.17 -0.8 1,885,435 + NIAGMN_09575 0.18 +0.4 1,885,460 + NIAGMN_09575 0.20 -1.2 1,885,460 + NIAGMN_09575 0.20 -0.5 1,885,512 + NIAGMN_09575 0.24 +0.1 1,885,578 - NIAGMN_09575 0.29 +1.1 1,885,580 + NIAGMN_09575 0.29 -0.0 1,885,604 - NIAGMN_09575 0.31 +0.0 1,885,735 + NIAGMN_09575 0.41 -0.4 1,885,755 - NIAGMN_09575 0.42 +0.3 1,885,766 + NIAGMN_09575 0.43 -2.8 1,885,766 + NIAGMN_09575 0.43 +1.3 1,885,767 - NIAGMN_09575 0.43 +0.6 1,885,831 + NIAGMN_09575 0.48 +1.3 1,885,831 + NIAGMN_09575 0.48 +1.2 1,885,835 + NIAGMN_09575 0.48 -0.8 1,885,953 - NIAGMN_09575 0.57 +0.3 1,885,995 - NIAGMN_09575 0.61 +1.7 1,885,995 - NIAGMN_09575 0.61 +0.0 1,886,004 + NIAGMN_09575 0.61 -0.2 1,886,051 - NIAGMN_09575 0.65 -0.8 1,886,064 + NIAGMN_09575 0.66 +0.5 1,886,139 + NIAGMN_09575 0.71 +0.6 1,886,177 + NIAGMN_09575 0.74 -0.6 1,886,178 - NIAGMN_09575 0.74 -2.0 1,886,198 + NIAGMN_09575 0.76 +1.1 1,886,198 + NIAGMN_09575 0.76 -0.4 1,886,202 + NIAGMN_09575 0.76 -0.4 1,886,226 - NIAGMN_09575 0.78 -1.1 1,886,238 + NIAGMN_09575 0.79 -0.9 1,886,238 + NIAGMN_09575 0.79 -2.7 1,886,238 + NIAGMN_09575 0.79 -1.2 1,886,238 + NIAGMN_09575 0.79 -1.9 1,886,239 - NIAGMN_09575 0.79 -1.4 1,886,239 - NIAGMN_09575 0.79 +0.2 1,886,240 + NIAGMN_09575 0.79 -0.2 1,886,240 + NIAGMN_09575 0.79 -1.4 1,886,240 + NIAGMN_09575 0.79 +1.2 1,886,252 + NIAGMN_09575 0.80 +1.2 1,886,252 + NIAGMN_09575 0.80 +0.6 1,886,252 + NIAGMN_09575 0.80 -1.2 1,886,333 + NIAGMN_09575 0.86 -0.2 1,886,333 + NIAGMN_09575 0.86 +0.5 1,886,353 + NIAGMN_09575 0.88 +0.6 1,886,353 + NIAGMN_09575 0.88 +0.4 1,886,369 + NIAGMN_09575 0.89 -2.2 1,886,369 + NIAGMN_09575 0.89 -0.6 1,886,369 + NIAGMN_09575 0.89 -1.9 1,886,369 + NIAGMN_09575 0.89 +0.3 1,886,393 + -0.3 1,886,393 + -0.6 1,886,393 + +0.3 1,886,394 - -0.5 1,886,394 - -0.3 1,886,394 - -0.1 1,886,437 + -0.1 1,886,437 + +0.1 1,886,437 + +0.1 1,886,437 + -0.6 1,886,438 - +0.9 1,886,438 - -0.9 1,886,455 - +0.9 1,886,459 + +0.3 1,886,477 + +0.3 1,886,590 + -0.4 1,886,611 + -2.1 1,886,611 + -1.4 1,886,611 + -0.0 1,886,612 - +1.2 1,886,670 + -0.0 1,886,670 + +0.3 1,886,671 - +0.9 1,886,671 - -2.6 1,886,679 + +0.1 1,886,694 - +0.2 1,886,705 + +0.5 1,886,705 + +0.2 1,886,706 - -0.8 1,886,709 + +0.7 1,886,710 - +0.3 1,886,711 + -0.7 1,886,712 - +0.4 1,886,787 + spoIVCA NIAGMN_09580 0.13 -1.8 1,886,787 + spoIVCA NIAGMN_09580 0.13 +1.1 1,886,882 - spoIVCA NIAGMN_09580 0.30 +1.0 1,886,895 + spoIVCA NIAGMN_09580 0.32 -0.5 1,886,896 - spoIVCA NIAGMN_09580 0.32 -0.4 1,886,896 - spoIVCA NIAGMN_09580 0.32 -0.7 1,886,941 + spoIVCA NIAGMN_09580 0.40 -0.8 1,886,941 + spoIVCA NIAGMN_09580 0.40 +1.2 1,887,006 + spoIVCA NIAGMN_09580 0.51 -2.8 1,887,006 + spoIVCA NIAGMN_09580 0.51 +0.4 1,887,091 + spoIVCA NIAGMN_09580 0.66 +0.9 1,887,091 + spoIVCA NIAGMN_09580 0.66 +0.1 1,887,091 + spoIVCA NIAGMN_09580 0.66 -0.1 1,887,092 - spoIVCA NIAGMN_09580 0.66 +1.8 1,887,092 - spoIVCA NIAGMN_09580 0.66 -0.6 1,887,092 - spoIVCA NIAGMN_09580 0.66 +0.8 1,887,092 - spoIVCA NIAGMN_09580 0.66 +0.6 1,887,172 + spoIVCA NIAGMN_09580 0.81 +0.1 1,887,173 - spoIVCA NIAGMN_09580 0.81 -0.2 1,887,282 + -2.5 1,887,282 + -2.2 1,887,283 - +0.2 1,887,283 - +0.7 1,887,355 + -0.1 1,887,420 + +0.5 1,887,420 + +0.6 1,887,421 - -2.2 1,887,440 + +1.0 1,887,440 + +0.7 1,887,440 + +0.3 1,887,461 + -0.4 1,887,462 - -0.5 1,887,462 - +0.2 1,887,462 - -1.9 1,887,480 + +0.4 1,887,511 + +1.4 1,887,512 - -0.6 1,887,512 - -0.5 1,887,512 - -2.1
Or see this region's nucleotide sequence