Strain Fitness in Escherichia coli ECRC102 around NIAGMN_07990

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdnaE and rnhB are separated by 36 nucleotidesrnhB and lpxB overlap by 4 nucleotides NIAGMN_07985: dnaE - DNA polymerase III subunit alpha, at 1,530,093 to 1,533,575 dnaE NIAGMN_07990: rnhB - ribonuclease HII, at 1,533,612 to 1,534,208 rnhB NIAGMN_07995: lpxB - lipid-A-disaccharide synthase, at 1,534,205 to 1,535,353 lpxB Position (kb) 1533 1534 1535Strain fitness (log2 ratio) -1 0 1 2at 1533.899 kb on - strand, within rnhBat 1533.912 kb on - strand, within rnhBat 1533.958 kb on - strand, within rnhB

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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1,533,899 - rnhB NIAGMN_07990 0.48 -0.3
1,533,912 - rnhB NIAGMN_07990 0.50 +2.7
1,533,958 - rnhB NIAGMN_07990 0.58 -1.1

Or see this region's nucleotide sequence