Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_03385 and cah are separated by 110 nucleotides cah and yeeP are separated by 371 nucleotides
NIAGMN_03385: NIAGMN_03385 - dGTPase, at 605,042 to 607,426
_03385
NIAGMN_03390: cah - calcium-binding autotransporter Cah, at 607,537 to 610,386
cah
NIAGMN_03395: yeeP - 50S ribosome-binding GTPase, at 610,758 to 611,630
yeeP
Position (kb) 607
608
609
610
611 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 606.581 kb on - strand, within NIAGMN_03385 at 606.628 kb on - strand, within NIAGMN_03385 at 606.870 kb on - strand, within NIAGMN_03385 at 606.943 kb on + strand, within NIAGMN_03385 at 606.950 kb on + strand, within NIAGMN_03385 at 607.038 kb on - strand, within NIAGMN_03385 at 607.532 kb on + strand at 607.569 kb on + strand at 607.571 kb on + strand at 607.632 kb on + strand at 607.710 kb on + strand at 607.870 kb on - strand, within cah at 607.938 kb on - strand, within cah at 608.268 kb on - strand, within cah at 608.268 kb on - strand, within cah at 608.268 kb on - strand, within cah at 608.517 kb on + strand, within cah at 608.517 kb on + strand, within cah at 608.518 kb on - strand, within cah at 608.518 kb on - strand, within cah at 608.519 kb on + strand, within cah at 608.520 kb on - strand, within cah at 608.594 kb on + strand, within cah at 608.595 kb on - strand, within cah at 608.770 kb on - strand, within cah at 608.817 kb on + strand, within cah at 608.998 kb on - strand, within cah at 609.307 kb on - strand, within cah at 609.307 kb on - strand, within cah at 609.332 kb on - strand, within cah at 609.332 kb on - strand, within cah at 609.494 kb on - strand, within cah at 609.494 kb on - strand, within cah at 609.494 kb on - strand, within cah at 609.494 kb on - strand, within cah at 609.518 kb on - strand, within cah at 609.518 kb on - strand, within cah at 609.574 kb on - strand, within cah at 609.578 kb on - strand, within cah at 609.612 kb on - strand, within cah at 609.715 kb on - strand, within cah at 609.780 kb on - strand, within cah at 609.931 kb on - strand, within cah at 610.128 kb on + strand at 610.216 kb on + strand at 610.339 kb on - strand at 610.362 kb on - strand at 610.478 kb on - strand at 610.478 kb on - strand at 610.478 kb on - strand at 610.523 kb on - strand at 610.651 kb on + strand at 611.055 kb on + strand, within yeeP at 611.130 kb on - strand, within yeeP at 611.214 kb on + strand, within yeeP at 611.215 kb on - strand, within yeeP at 611.264 kb on + strand, within yeeP at 611.265 kb on - strand, within yeeP at 611.321 kb on - strand, within yeeP
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 606,581 - NIAGMN_03385 0.65 +0.8 606,628 - NIAGMN_03385 0.66 +0.9 606,870 - NIAGMN_03385 0.77 +0.1 606,943 + NIAGMN_03385 0.80 -1.0 606,950 + NIAGMN_03385 0.80 +0.2 607,038 - NIAGMN_03385 0.84 -0.4 607,532 + +1.3 607,569 + +0.2 607,571 + -2.6 607,632 + +1.0 607,710 + -1.9 607,870 - cah NIAGMN_03390 0.12 -1.1 607,938 - cah NIAGMN_03390 0.14 +0.5 608,268 - cah NIAGMN_03390 0.26 +0.0 608,268 - cah NIAGMN_03390 0.26 +0.0 608,268 - cah NIAGMN_03390 0.26 +0.0 608,517 + cah NIAGMN_03390 0.34 +0.6 608,517 + cah NIAGMN_03390 0.34 -0.2 608,518 - cah NIAGMN_03390 0.34 -1.3 608,518 - cah NIAGMN_03390 0.34 +0.2 608,519 + cah NIAGMN_03390 0.34 +0.4 608,520 - cah NIAGMN_03390 0.34 -0.9 608,594 + cah NIAGMN_03390 0.37 -0.1 608,595 - cah NIAGMN_03390 0.37 +0.2 608,770 - cah NIAGMN_03390 0.43 +1.2 608,817 + cah NIAGMN_03390 0.45 -0.8 608,998 - cah NIAGMN_03390 0.51 -0.5 609,307 - cah NIAGMN_03390 0.62 +0.3 609,307 - cah NIAGMN_03390 0.62 +1.3 609,332 - cah NIAGMN_03390 0.63 +1.5 609,332 - cah NIAGMN_03390 0.63 -0.2 609,494 - cah NIAGMN_03390 0.69 -2.2 609,494 - cah NIAGMN_03390 0.69 -0.1 609,494 - cah NIAGMN_03390 0.69 -0.2 609,494 - cah NIAGMN_03390 0.69 -0.4 609,518 - cah NIAGMN_03390 0.70 +0.0 609,518 - cah NIAGMN_03390 0.70 -3.3 609,574 - cah NIAGMN_03390 0.71 +0.8 609,578 - cah NIAGMN_03390 0.72 +0.3 609,612 - cah NIAGMN_03390 0.73 -1.2 609,715 - cah NIAGMN_03390 0.76 -0.1 609,780 - cah NIAGMN_03390 0.79 -1.3 609,931 - cah NIAGMN_03390 0.84 +0.6 610,128 + -0.8 610,216 + +0.8 610,339 - -1.7 610,362 - +0.7 610,478 - -1.1 610,478 - +0.1 610,478 - -3.1 610,523 - +1.4 610,651 + -1.0 611,055 + yeeP NIAGMN_03395 0.34 +1.4 611,130 - yeeP NIAGMN_03395 0.43 -0.6 611,214 + yeeP NIAGMN_03395 0.52 -2.3 611,215 - yeeP NIAGMN_03395 0.52 +0.1 611,264 + yeeP NIAGMN_03395 0.58 +0.7 611,265 - yeeP NIAGMN_03395 0.58 -0.3 611,321 - yeeP NIAGMN_03395 0.64 -1.2
Or see this region's nucleotide sequence