Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hemB and tauD are separated by 106 nucleotides tauD and tauC overlap by 4 nucleotides tauC and tauB overlap by 4 nucleotides
MCAODC_27910: hemB - porphobilinogen synthase, at 2,329,740 to 2,330,714
hemB
MCAODC_27915: tauD - taurine dioxygenase, at 2,330,821 to 2,331,672
tauD
MCAODC_27920: tauC - taurine ABC transporter permease TauC, at 2,331,669 to 2,332,496
tauC
MCAODC_27925: tauB - taurine ABC transporter ATP-binding subunit, at 2,332,493 to 2,333,260
tauB
Position (kb)
2330
2331
2332 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2330.742 kb on + strand at 2330.742 kb on + strand at 2330.743 kb on - strand at 2330.743 kb on - strand at 2330.820 kb on - strand at 2330.822 kb on + strand at 2330.872 kb on - strand at 2330.872 kb on - strand at 2330.906 kb on + strand at 2330.983 kb on - strand, within tauD at 2331.054 kb on + strand, within tauD at 2331.054 kb on + strand, within tauD at 2331.118 kb on + strand, within tauD at 2331.119 kb on - strand, within tauD at 2331.119 kb on - strand, within tauD at 2331.119 kb on - strand, within tauD at 2331.119 kb on - strand, within tauD at 2331.119 kb on - strand, within tauD at 2331.189 kb on - strand, within tauD at 2331.269 kb on + strand, within tauD at 2331.269 kb on + strand, within tauD at 2331.270 kb on - strand, within tauD at 2331.270 kb on - strand, within tauD at 2331.361 kb on - strand, within tauD at 2331.375 kb on + strand, within tauD at 2331.402 kb on + strand, within tauD at 2331.567 kb on - strand, within tauD at 2331.635 kb on + strand at 2331.675 kb on + strand at 2331.676 kb on - strand at 2331.729 kb on + strand at 2331.730 kb on - strand at 2331.812 kb on + strand, within tauC at 2331.812 kb on + strand, within tauC at 2331.813 kb on - strand, within tauC at 2331.813 kb on - strand, within tauC at 2331.884 kb on + strand, within tauC at 2331.884 kb on + strand, within tauC at 2331.884 kb on + strand, within tauC at 2331.884 kb on + strand, within tauC at 2331.885 kb on - strand, within tauC at 2331.889 kb on - strand, within tauC at 2332.048 kb on + strand, within tauC at 2332.048 kb on + strand, within tauC at 2332.049 kb on - strand, within tauC at 2332.049 kb on - strand, within tauC at 2332.057 kb on - strand, within tauC at 2332.079 kb on + strand, within tauC at 2332.080 kb on - strand, within tauC at 2332.225 kb on - strand, within tauC at 2332.323 kb on + strand, within tauC at 2332.324 kb on - strand, within tauC at 2332.355 kb on + strand, within tauC at 2332.386 kb on + strand, within tauC at 2332.387 kb on - strand, within tauC at 2332.387 kb on - strand, within tauC at 2332.387 kb on - strand, within tauC at 2332.395 kb on + strand, within tauC at 2332.396 kb on - strand, within tauC at 2332.396 kb on - strand, within tauC at 2332.419 kb on + strand at 2332.420 kb on - strand at 2332.520 kb on + strand at 2332.529 kb on + strand at 2332.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,330,742 + +0.5 2,330,742 + +0.8 2,330,743 - +3.1 2,330,743 - +0.4 2,330,820 - -0.6 2,330,822 + +0.7 2,330,872 - +1.2 2,330,872 - +0.2 2,330,906 + +3.2 2,330,983 - tauD MCAODC_27915 0.19 +0.6 2,331,054 + tauD MCAODC_27915 0.27 -0.4 2,331,054 + tauD MCAODC_27915 0.27 -0.5 2,331,118 + tauD MCAODC_27915 0.35 +0.0 2,331,119 - tauD MCAODC_27915 0.35 +0.2 2,331,119 - tauD MCAODC_27915 0.35 +0.7 2,331,119 - tauD MCAODC_27915 0.35 -0.8 2,331,119 - tauD MCAODC_27915 0.35 +0.3 2,331,119 - tauD MCAODC_27915 0.35 +0.0 2,331,189 - tauD MCAODC_27915 0.43 -0.8 2,331,269 + tauD MCAODC_27915 0.53 +0.5 2,331,269 + tauD MCAODC_27915 0.53 -2.8 2,331,270 - tauD MCAODC_27915 0.53 +0.1 2,331,270 - tauD MCAODC_27915 0.53 -2.1 2,331,361 - tauD MCAODC_27915 0.63 +1.8 2,331,375 + tauD MCAODC_27915 0.65 -2.1 2,331,402 + tauD MCAODC_27915 0.68 -0.7 2,331,567 - tauD MCAODC_27915 0.88 -0.3 2,331,635 + -0.2 2,331,675 + -0.3 2,331,676 - -0.2 2,331,729 + -2.2 2,331,730 - +0.1 2,331,812 + tauC MCAODC_27920 0.17 -1.2 2,331,812 + tauC MCAODC_27920 0.17 -2.5 2,331,813 - tauC MCAODC_27920 0.17 +1.1 2,331,813 - tauC MCAODC_27920 0.17 +0.3 2,331,884 + tauC MCAODC_27920 0.26 +0.3 2,331,884 + tauC MCAODC_27920 0.26 -0.1 2,331,884 + tauC MCAODC_27920 0.26 +0.2 2,331,884 + tauC MCAODC_27920 0.26 -3.3 2,331,885 - tauC MCAODC_27920 0.26 -0.1 2,331,889 - tauC MCAODC_27920 0.27 +0.0 2,332,048 + tauC MCAODC_27920 0.46 +1.5 2,332,048 + tauC MCAODC_27920 0.46 +0.1 2,332,049 - tauC MCAODC_27920 0.46 -0.4 2,332,049 - tauC MCAODC_27920 0.46 -0.8 2,332,057 - tauC MCAODC_27920 0.47 -0.3 2,332,079 + tauC MCAODC_27920 0.50 -0.7 2,332,080 - tauC MCAODC_27920 0.50 +0.8 2,332,225 - tauC MCAODC_27920 0.67 -0.2 2,332,323 + tauC MCAODC_27920 0.79 +0.2 2,332,324 - tauC MCAODC_27920 0.79 +0.3 2,332,355 + tauC MCAODC_27920 0.83 -0.2 2,332,386 + tauC MCAODC_27920 0.87 -3.2 2,332,387 - tauC MCAODC_27920 0.87 +0.1 2,332,387 - tauC MCAODC_27920 0.87 +1.2 2,332,387 - tauC MCAODC_27920 0.87 -0.8 2,332,395 + tauC MCAODC_27920 0.88 -0.2 2,332,396 - tauC MCAODC_27920 0.88 -0.4 2,332,396 - tauC MCAODC_27920 0.88 +2.0 2,332,419 + -0.0 2,332,420 - +0.6 2,332,520 + +1.0 2,332,529 + +0.6 2,332,530 - +0.3
Or see this region's nucleotide sequence