Strain Fitness in Escherichia coli ECRC101 around MCAODC_27455

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,234,809	+	maa	MCAODC_27445	0.56	-0.2
2,234,820	-	maa	MCAODC_27445	0.58	-2.7
2,234,823	+	maa	MCAODC_27445	0.59	-3.4
2,234,823	+	maa	MCAODC_27445	0.59	+0.3
2,234,824	-	maa	MCAODC_27445	0.59	+1.0
2,234,852	-	maa	MCAODC_27445	0.64	+2.2
2,234,859	-	maa	MCAODC_27445	0.65	+0.7
2,234,859	-	maa	MCAODC_27445	0.65	-0.1
2,234,897	+	maa	MCAODC_27445	0.72	+0.2
2,234,898	-	maa	MCAODC_27445	0.72	-2.6
2,234,954	+	maa	MCAODC_27445	0.82	+1.3
2,234,955	-	maa	MCAODC_27445	0.83	-0.6
2,235,069	+				-0.8
2,235,107	+				-1.0
2,235,108	-				+0.5
2,235,118	+				+0.4
2,235,176	+				-0.4
2,235,176	+				-1.3
2,235,246	+	ylaC	MCAODC_27450	0.17	-1.2
2,235,246	+	ylaC	MCAODC_27450	0.17	+0.8
2,235,288	+	ylaC	MCAODC_27450	0.26	-1.0
2,235,292	+	ylaC	MCAODC_27450	0.27	-0.5
2,235,292	+	ylaC	MCAODC_27450	0.27	-0.1
2,235,292	+	ylaC	MCAODC_27450	0.27	-0.4
2,235,292	+	ylaC	MCAODC_27450	0.27	+0.0
2,235,292	+	ylaC	MCAODC_27450	0.27	-0.2
2,235,293	-	ylaC	MCAODC_27450	0.27	-0.0
2,235,293	-	ylaC	MCAODC_27450	0.27	+0.8
2,235,293	-	ylaC	MCAODC_27450	0.27	-1.5
2,235,293	-	ylaC	MCAODC_27450	0.27	-2.1
2,235,293	-	ylaC	MCAODC_27450	0.27	+0.7
2,235,293	-	ylaC	MCAODC_27450	0.27	+0.2
2,235,293	-	ylaC	MCAODC_27450	0.27	-0.3
2,235,368	+	ylaC	MCAODC_27450	0.43	+0.8
2,235,371	+	ylaC	MCAODC_27450	0.44	-2.5
2,235,372	-	ylaC	MCAODC_27450	0.44	+0.6
2,235,375	+	ylaC	MCAODC_27450	0.44	-1.4
2,235,376	-	ylaC	MCAODC_27450	0.45	+0.4
2,235,425	-	ylaC	MCAODC_27450	0.55	+0.9
2,235,461	-	ylaC	MCAODC_27450	0.63	-0.1
2,235,461	-	ylaC	MCAODC_27450	0.63	-1.8
2,235,461	-	ylaC	MCAODC_27450	0.63	+0.6
2,235,476	-	ylaC	MCAODC_27450	0.66	-0.2
2,235,576	+	ylaC	MCAODC_27450	0.87	-0.2
2,235,635	-				+0.6
2,235,635	-				+0.1
2,235,635	-				-0.4
2,235,635	-				-2.3
2,235,645	+				+0.3
2,235,646	-				-0.2
2,235,646	-				+1.0
2,235,650	-				-1.3
2,235,650	-				-1.8
2,235,650	-				+1.8
2,235,650	-				+0.3
2,235,650	-				-2.8
2,235,724	+				+1.4
2,235,732	+				+0.2
2,235,764	-				-1.2
2,235,764	-				-0.7
2,235,765	+				-0.0
2,235,765	+				+0.3
2,235,765	+				+0.1
2,235,765	+				-2.9
2,235,766	-				+1.4
2,235,766	-				+0.1
2,235,784	+				+0.3
2,235,784	+				+1.1
2,235,785	-				+0.5
2,235,827	-				+0.7
2,235,838	-				+0.9
2,235,853	-				+0.7
2,235,871	-				-0.1
2,235,871	-				+1.6
2,235,897	+				+0.1
2,235,925	+				-0.6
2,235,929	+				-0.6
2,235,930	-				+0.8
2,235,958	+	pdeB	MCAODC_27455	0.10	-1.6
2,235,959	-	pdeB	MCAODC_27455	0.10	-0.4
2,235,959	-	pdeB	MCAODC_27455	0.10	-0.7
2,236,021	+	pdeB	MCAODC_27455	0.14	-2.9
2,236,021	+	pdeB	MCAODC_27455	0.14	-0.2
2,236,021	+	pdeB	MCAODC_27455	0.14	-1.0
2,236,022	-	pdeB	MCAODC_27455	0.14	+1.2
2,236,058	+	pdeB	MCAODC_27455	0.17	+0.6
2,236,059	-	pdeB	MCAODC_27455	0.17	+0.2
2,236,059	-	pdeB	MCAODC_27455	0.17	-0.4
2,236,064	+	pdeB	MCAODC_27455	0.17	+0.5
2,236,070	+	pdeB	MCAODC_27455	0.17	+1.1
2,236,070	+	pdeB	MCAODC_27455	0.17	-0.8
2,236,071	-	pdeB	MCAODC_27455	0.17	-0.0
2,236,073	-	pdeB	MCAODC_27455	0.18	+0.9
2,236,089	-	pdeB	MCAODC_27455	0.19	+0.3
2,236,212	+	pdeB	MCAODC_27455	0.27	+0.7
2,236,226	+	pdeB	MCAODC_27455	0.27	-0.5
2,236,253	+	pdeB	MCAODC_27455	0.29	-0.5
2,236,253	+	pdeB	MCAODC_27455	0.29	-2.8
2,236,253	+	pdeB	MCAODC_27455	0.29	+0.8
2,236,253	+	pdeB	MCAODC_27455	0.29	+0.2
2,236,253	+	pdeB	MCAODC_27455	0.29	-1.3
2,236,253	+	pdeB	MCAODC_27455	0.29	-0.3
2,236,253	+	pdeB	MCAODC_27455	0.29	-1.3
2,236,253	+	pdeB	MCAODC_27455	0.29	-1.3
2,236,254	-	pdeB	MCAODC_27455	0.29	-1.9
2,236,254	-	pdeB	MCAODC_27455	0.29	-2.8
2,236,254	-	pdeB	MCAODC_27455	0.29	+0.7
2,236,283	-	pdeB	MCAODC_27455	0.31	-2.5
2,236,283	-	pdeB	MCAODC_27455	0.31	-1.7
2,236,298	+	pdeB	MCAODC_27455	0.32	-0.1
2,236,301	-	pdeB	MCAODC_27455	0.32	+0.3
2,236,328	-	pdeB	MCAODC_27455	0.34	+0.6
2,236,384	+	pdeB	MCAODC_27455	0.38	-2.0
2,236,384	+	pdeB	MCAODC_27455	0.38	+0.8
2,236,385	-	pdeB	MCAODC_27455	0.38	-0.3
2,236,439	+	pdeB	MCAODC_27455	0.41	-1.9
2,236,440	-	pdeB	MCAODC_27455	0.41	-0.5
2,236,477	+	pdeB	MCAODC_27455	0.44	-1.1
2,236,477	+	pdeB	MCAODC_27455	0.44	+0.8
2,236,478	-	pdeB	MCAODC_27455	0.44	-0.8
2,236,478	-	pdeB	MCAODC_27455	0.44	+0.6
2,236,532	-	pdeB	MCAODC_27455	0.47	+1.2
2,236,532	-	pdeB	MCAODC_27455	0.47	+1.8
2,236,649	-	pdeB	MCAODC_27455	0.55	+0.8
2,236,662	-	pdeB	MCAODC_27455	0.56	+1.6
2,236,738	+	pdeB	MCAODC_27455	0.60	+1.4
2,236,738	+	pdeB	MCAODC_27455	0.60	-0.4
2,236,738	+	pdeB	MCAODC_27455	0.60	+1.6
2,236,756	+	pdeB	MCAODC_27455	0.62	-2.3
2,236,763	-	pdeB	MCAODC_27455	0.62	+0.8
2,236,814	-	pdeB	MCAODC_27455	0.65	+1.3
2,236,814	-	pdeB	MCAODC_27455	0.65	+1.0
2,236,815	+	pdeB	MCAODC_27455	0.65	+1.0
2,236,816	-	pdeB	MCAODC_27455	0.66	+1.2
2,236,816	-	pdeB	MCAODC_27455	0.66	+0.1
2,236,870	+	pdeB	MCAODC_27455	0.69	-1.4
2,236,870	+	pdeB	MCAODC_27455	0.69	-0.1
2,236,954	+	pdeB	MCAODC_27455	0.74	-0.6
2,237,092	-	pdeB	MCAODC_27455	0.83	-0.1
2,237,096	+	pdeB	MCAODC_27455	0.84	+1.1
2,237,100	+	pdeB	MCAODC_27455	0.84	+0.1
2,237,100	+	pdeB	MCAODC_27455	0.84	+0.1
2,237,161	+	pdeB	MCAODC_27455	0.88	+1.5
2,237,161	+	pdeB	MCAODC_27455	0.88	+0.3
2,237,162	-	pdeB	MCAODC_27455	0.88	-0.4
2,237,394	-				-1.6
2,237,499	+	ybaA	MCAODC_27460	0.30	+0.3
2,237,499	+	ybaA	MCAODC_27460	0.30	-2.7
2,237,499	+	ybaA	MCAODC_27460	0.30	-1.8
2,237,500	-	ybaA	MCAODC_27460	0.31	+0.3
2,237,635	-	ybaA	MCAODC_27460	0.69	+0.7
2,237,635	-	ybaA	MCAODC_27460	0.69	+0.4
2,237,656	-	ybaA	MCAODC_27460	0.75	+0.8
2,237,738	+				+2.0
2,237,738	+				-2.3
2,237,738	+				+0.4
2,237,738	+				-1.1
2,237,738	+				+0.1
2,237,739	-				-1.5
2,237,739	-				+0.1
2,237,739	-				+0.4
2,237,739	-				-0.2
2,237,739	-				+0.2
2,237,753	-				+1.5
2,237,753	-				+0.8
2,237,753	-				+1.2
2,238,094	+				+0.4
2,238,094	+				-0.5
2,238,095	-				-0.1
2,238,187	+	atl	MCAODC_27470	0.20	-0.4
2,238,187	+	atl	MCAODC_27470	0.20	-0.3
2,238,187	+	atl	MCAODC_27470	0.20	+0.9
2,238,187	+	atl	MCAODC_27470	0.20	-0.1
2,238,187	+	atl	MCAODC_27470	0.20	+0.1
2,238,187	+	atl	MCAODC_27470	0.20	-3.5
2,238,188	-	atl	MCAODC_27470	0.21	+0.9
2,238,199	+	atl	MCAODC_27470	0.24	+0.9
2,238,200	-	atl	MCAODC_27470	0.24	-3.2
2,238,200	-	atl	MCAODC_27470	0.24	-0.4
2,238,260	+	atl	MCAODC_27470	0.44	-0.4
2,238,345	-	atl	MCAODC_27470	0.71	-0.3