Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt aes and hemH overlap by 4 nucleotides hemH and adk are separated by 131 nucleotides adk and htpG are separated by 120 nucleotides
MCAODC_27360: aes - acetyl esterase, at 2,214,718 to 2,215,677
aes
MCAODC_27365: hemH - ferrochelatase, at 2,215,674 to 2,216,636
hemH
MCAODC_27370: adk - adenylate kinase, at 2,216,768 to 2,217,472
adk
MCAODC_27375: htpG - molecular chaperone HtpG, at 2,217,593 to 2,219,467
htpG
Position (kb)
2215
2216
2217 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2214.687 kb on + strand at 2214.688 kb on - strand at 2214.718 kb on - strand at 2214.753 kb on + strand at 2214.753 kb on + strand at 2214.783 kb on + strand at 2214.844 kb on + strand, within aes at 2214.844 kb on + strand, within aes at 2214.844 kb on + strand, within aes at 2214.845 kb on - strand, within aes at 2214.845 kb on - strand, within aes at 2214.847 kb on + strand, within aes at 2214.848 kb on - strand, within aes at 2214.904 kb on + strand, within aes at 2214.905 kb on - strand, within aes at 2214.905 kb on - strand, within aes at 2214.905 kb on - strand, within aes at 2214.922 kb on + strand, within aes at 2214.977 kb on + strand, within aes at 2214.977 kb on + strand, within aes at 2214.978 kb on - strand, within aes at 2215.002 kb on + strand, within aes at 2215.003 kb on - strand, within aes at 2215.003 kb on - strand, within aes at 2215.054 kb on + strand, within aes at 2215.055 kb on - strand, within aes at 2215.065 kb on + strand, within aes at 2215.065 kb on + strand, within aes at 2215.077 kb on + strand, within aes at 2215.077 kb on + strand, within aes at 2215.084 kb on + strand, within aes at 2215.085 kb on - strand, within aes at 2215.085 kb on - strand, within aes at 2215.147 kb on + strand, within aes at 2215.147 kb on + strand, within aes at 2215.148 kb on - strand, within aes at 2215.172 kb on - strand, within aes at 2215.182 kb on + strand, within aes at 2215.182 kb on + strand, within aes at 2215.182 kb on + strand, within aes at 2215.387 kb on + strand, within aes at 2215.388 kb on - strand, within aes at 2215.399 kb on + strand, within aes at 2215.399 kb on + strand, within aes at 2215.435 kb on + strand, within aes at 2215.435 kb on + strand, within aes at 2215.436 kb on - strand, within aes at 2215.449 kb on + strand, within aes at 2215.449 kb on + strand, within aes at 2215.482 kb on + strand, within aes at 2215.576 kb on + strand, within aes at 2215.576 kb on + strand, within aes at 2215.577 kb on - strand, within aes at 2215.606 kb on + strand at 2215.606 kb on + strand at 2215.662 kb on + strand at 2216.667 kb on - strand at 2216.672 kb on + strand at 2216.697 kb on + strand at 2216.713 kb on + strand at 2216.713 kb on + strand at 2217.526 kb on - strand at 2217.545 kb on + strand at 2217.545 kb on + strand at 2217.545 kb on + strand at 2217.589 kb on + strand at 2217.589 kb on + strand at 2217.589 kb on + strand at 2217.589 kb on + strand at 2217.589 kb on + strand at 2217.590 kb on - strand at 2217.590 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,214,687 + +0.1 2,214,688 - +1.4 2,214,718 - +0.4 2,214,753 + -0.0 2,214,753 + -1.1 2,214,783 + +0.5 2,214,844 + aes MCAODC_27360 0.13 -0.4 2,214,844 + aes MCAODC_27360 0.13 -0.4 2,214,844 + aes MCAODC_27360 0.13 +0.6 2,214,845 - aes MCAODC_27360 0.13 +0.1 2,214,845 - aes MCAODC_27360 0.13 -1.4 2,214,847 + aes MCAODC_27360 0.13 +2.1 2,214,848 - aes MCAODC_27360 0.14 +1.2 2,214,904 + aes MCAODC_27360 0.19 -0.4 2,214,905 - aes MCAODC_27360 0.19 -0.5 2,214,905 - aes MCAODC_27360 0.19 +0.3 2,214,905 - aes MCAODC_27360 0.19 +2.4 2,214,922 + aes MCAODC_27360 0.21 +1.1 2,214,977 + aes MCAODC_27360 0.27 +0.3 2,214,977 + aes MCAODC_27360 0.27 -2.3 2,214,978 - aes MCAODC_27360 0.27 -0.6 2,215,002 + aes MCAODC_27360 0.30 -0.7 2,215,003 - aes MCAODC_27360 0.30 +0.7 2,215,003 - aes MCAODC_27360 0.30 -0.1 2,215,054 + aes MCAODC_27360 0.35 +1.5 2,215,055 - aes MCAODC_27360 0.35 -0.3 2,215,065 + aes MCAODC_27360 0.36 +0.8 2,215,065 + aes MCAODC_27360 0.36 -0.4 2,215,077 + aes MCAODC_27360 0.37 +0.5 2,215,077 + aes MCAODC_27360 0.37 -1.8 2,215,084 + aes MCAODC_27360 0.38 +0.3 2,215,085 - aes MCAODC_27360 0.38 -0.1 2,215,085 - aes MCAODC_27360 0.38 +0.2 2,215,147 + aes MCAODC_27360 0.45 +0.5 2,215,147 + aes MCAODC_27360 0.45 -0.1 2,215,148 - aes MCAODC_27360 0.45 +0.3 2,215,172 - aes MCAODC_27360 0.47 -0.0 2,215,182 + aes MCAODC_27360 0.48 -0.2 2,215,182 + aes MCAODC_27360 0.48 -0.5 2,215,182 + aes MCAODC_27360 0.48 +1.9 2,215,387 + aes MCAODC_27360 0.70 +1.3 2,215,388 - aes MCAODC_27360 0.70 -1.7 2,215,399 + aes MCAODC_27360 0.71 +0.9 2,215,399 + aes MCAODC_27360 0.71 +0.8 2,215,435 + aes MCAODC_27360 0.75 -0.7 2,215,435 + aes MCAODC_27360 0.75 +1.3 2,215,436 - aes MCAODC_27360 0.75 -1.4 2,215,449 + aes MCAODC_27360 0.76 +1.5 2,215,449 + aes MCAODC_27360 0.76 -3.3 2,215,482 + aes MCAODC_27360 0.80 -1.4 2,215,576 + aes MCAODC_27360 0.89 +0.2 2,215,576 + aes MCAODC_27360 0.89 -0.5 2,215,577 - aes MCAODC_27360 0.89 -0.4 2,215,606 + +0.3 2,215,606 + +1.9 2,215,662 + -1.5 2,216,667 - -1.6 2,216,672 + +1.4 2,216,697 + -1.4 2,216,713 + +0.6 2,216,713 + -0.7 2,217,526 - -0.2 2,217,545 + +0.8 2,217,545 + -2.4 2,217,545 + +1.8 2,217,589 + +1.1 2,217,589 + -1.3 2,217,589 + -0.2 2,217,589 + +0.6 2,217,589 + +0.4 2,217,590 - -1.3 2,217,590 - +0.7
Or see this region's nucleotide sequence