Strain Fitness in Escherichia coli ECRC101 around MCAODC_27365

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntaes and hemH overlap by 4 nucleotideshemH and adk are separated by 131 nucleotidesadk and htpG are separated by 120 nucleotides MCAODC_27360: aes - acetyl esterase, at 2,214,718 to 2,215,677 aes MCAODC_27365: hemH - ferrochelatase, at 2,215,674 to 2,216,636 hemH MCAODC_27370: adk - adenylate kinase, at 2,216,768 to 2,217,472 adk MCAODC_27375: htpG - molecular chaperone HtpG, at 2,217,593 to 2,219,467 htpG Position (kb) 2215 2216 2217Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2214.687 kb on + strandat 2214.688 kb on - strandat 2214.718 kb on - strandat 2214.753 kb on + strandat 2214.753 kb on + strandat 2214.783 kb on + strandat 2214.844 kb on + strand, within aesat 2214.844 kb on + strand, within aesat 2214.844 kb on + strand, within aesat 2214.845 kb on - strand, within aesat 2214.845 kb on - strand, within aesat 2214.847 kb on + strand, within aesat 2214.848 kb on - strand, within aesat 2214.904 kb on + strand, within aesat 2214.905 kb on - strand, within aesat 2214.905 kb on - strand, within aesat 2214.905 kb on - strand, within aesat 2214.922 kb on + strand, within aesat 2214.977 kb on + strand, within aesat 2214.977 kb on + strand, within aesat 2214.978 kb on - strand, within aesat 2215.002 kb on + strand, within aesat 2215.003 kb on - strand, within aesat 2215.003 kb on - strand, within aesat 2215.054 kb on + strand, within aesat 2215.055 kb on - strand, within aesat 2215.065 kb on + strand, within aesat 2215.065 kb on + strand, within aesat 2215.077 kb on + strand, within aesat 2215.077 kb on + strand, within aesat 2215.084 kb on + strand, within aesat 2215.085 kb on - strand, within aesat 2215.085 kb on - strand, within aesat 2215.147 kb on + strand, within aesat 2215.147 kb on + strand, within aesat 2215.148 kb on - strand, within aesat 2215.172 kb on - strand, within aesat 2215.182 kb on + strand, within aesat 2215.182 kb on + strand, within aesat 2215.182 kb on + strand, within aesat 2215.387 kb on + strand, within aesat 2215.388 kb on - strand, within aesat 2215.399 kb on + strand, within aesat 2215.399 kb on + strand, within aesat 2215.435 kb on + strand, within aesat 2215.435 kb on + strand, within aesat 2215.436 kb on - strand, within aesat 2215.449 kb on + strand, within aesat 2215.449 kb on + strand, within aesat 2215.482 kb on + strand, within aesat 2215.576 kb on + strand, within aesat 2215.576 kb on + strand, within aesat 2215.577 kb on - strand, within aesat 2215.606 kb on + strandat 2215.606 kb on + strandat 2215.662 kb on + strandat 2216.667 kb on - strandat 2216.672 kb on + strandat 2216.697 kb on + strandat 2216.713 kb on + strandat 2216.713 kb on + strandat 2217.526 kb on - strandat 2217.545 kb on + strandat 2217.545 kb on + strandat 2217.545 kb on + strandat 2217.589 kb on + strandat 2217.589 kb on + strandat 2217.589 kb on + strandat 2217.589 kb on + strandat 2217.589 kb on + strandat 2217.590 kb on - strandat 2217.590 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,214,687 + +0.1
2,214,688 - +1.4
2,214,718 - +0.4
2,214,753 + -0.0
2,214,753 + -1.1
2,214,783 + +0.5
2,214,844 + aes MCAODC_27360 0.13 -0.4
2,214,844 + aes MCAODC_27360 0.13 -0.4
2,214,844 + aes MCAODC_27360 0.13 +0.6
2,214,845 - aes MCAODC_27360 0.13 +0.1
2,214,845 - aes MCAODC_27360 0.13 -1.4
2,214,847 + aes MCAODC_27360 0.13 +2.1
2,214,848 - aes MCAODC_27360 0.14 +1.2
2,214,904 + aes MCAODC_27360 0.19 -0.4
2,214,905 - aes MCAODC_27360 0.19 -0.5
2,214,905 - aes MCAODC_27360 0.19 +0.3
2,214,905 - aes MCAODC_27360 0.19 +2.4
2,214,922 + aes MCAODC_27360 0.21 +1.1
2,214,977 + aes MCAODC_27360 0.27 +0.3
2,214,977 + aes MCAODC_27360 0.27 -2.3
2,214,978 - aes MCAODC_27360 0.27 -0.6
2,215,002 + aes MCAODC_27360 0.30 -0.7
2,215,003 - aes MCAODC_27360 0.30 +0.7
2,215,003 - aes MCAODC_27360 0.30 -0.1
2,215,054 + aes MCAODC_27360 0.35 +1.5
2,215,055 - aes MCAODC_27360 0.35 -0.3
2,215,065 + aes MCAODC_27360 0.36 +0.8
2,215,065 + aes MCAODC_27360 0.36 -0.4
2,215,077 + aes MCAODC_27360 0.37 +0.5
2,215,077 + aes MCAODC_27360 0.37 -1.8
2,215,084 + aes MCAODC_27360 0.38 +0.3
2,215,085 - aes MCAODC_27360 0.38 -0.1
2,215,085 - aes MCAODC_27360 0.38 +0.2
2,215,147 + aes MCAODC_27360 0.45 +0.5
2,215,147 + aes MCAODC_27360 0.45 -0.1
2,215,148 - aes MCAODC_27360 0.45 +0.3
2,215,172 - aes MCAODC_27360 0.47 -0.0
2,215,182 + aes MCAODC_27360 0.48 -0.2
2,215,182 + aes MCAODC_27360 0.48 -0.5
2,215,182 + aes MCAODC_27360 0.48 +1.9
2,215,387 + aes MCAODC_27360 0.70 +1.3
2,215,388 - aes MCAODC_27360 0.70 -1.7
2,215,399 + aes MCAODC_27360 0.71 +0.9
2,215,399 + aes MCAODC_27360 0.71 +0.8
2,215,435 + aes MCAODC_27360 0.75 -0.7
2,215,435 + aes MCAODC_27360 0.75 +1.3
2,215,436 - aes MCAODC_27360 0.75 -1.4
2,215,449 + aes MCAODC_27360 0.76 +1.5
2,215,449 + aes MCAODC_27360 0.76 -3.3
2,215,482 + aes MCAODC_27360 0.80 -1.4
2,215,576 + aes MCAODC_27360 0.89 +0.2
2,215,576 + aes MCAODC_27360 0.89 -0.5
2,215,577 - aes MCAODC_27360 0.89 -0.4
2,215,606 + +0.3
2,215,606 + +1.9
2,215,662 + -1.5
2,216,667 - -1.6
2,216,672 + +1.4
2,216,697 + -1.4
2,216,713 + +0.6
2,216,713 + -0.7
2,217,526 - -0.2
2,217,545 + +0.8
2,217,545 + -2.4
2,217,545 + +1.8
2,217,589 + +1.1
2,217,589 + -1.3
2,217,589 + -0.2
2,217,589 + +0.6
2,217,589 + +0.4
2,217,590 - -1.3
2,217,590 - +0.7

Or see this region's nucleotide sequence