Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MCAODC_23730 and MCAODC_23735 overlap by 35 nucleotides MCAODC_23735 and MCAODC_23740 are separated by 840 nucleotides
MCAODC_23730: MCAODC_23730 - IS3 family transposase, at 1,462,735 to 1,463,622
_23730
MCAODC_23735: MCAODC_23735 - AMP nucleosidase, at 1,463,588 to 1,463,677
_23735
MCAODC_23740: MCAODC_23740 - DUF3987 domain-containing protein, at 1,464,518 to 1,465,903
_23740
Position (kb)
1464
1465
1466 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1463.830 kb on - strand at 1463.841 kb on - strand at 1464.185 kb on - strand at 1464.233 kb on + strand at 1464.233 kb on + strand at 1464.254 kb on - strand at 1464.298 kb on + strand at 1464.356 kb on + strand at 1464.494 kb on - strand at 1464.496 kb on - strand at 1464.650 kb on + strand at 1464.697 kb on - strand, within MCAODC_23740 at 1464.798 kb on + strand, within MCAODC_23740 at 1464.799 kb on - strand, within MCAODC_23740 at 1464.811 kb on - strand, within MCAODC_23740 at 1464.822 kb on - strand, within MCAODC_23740 at 1464.909 kb on + strand, within MCAODC_23740 at 1464.910 kb on - strand, within MCAODC_23740 at 1464.931 kb on - strand, within MCAODC_23740 at 1465.523 kb on - strand, within MCAODC_23740 at 1465.655 kb on - strand, within MCAODC_23740 at 1466.434 kb on + strand at 1466.435 kb on - strand at 1466.502 kb on + strand at 1466.502 kb on + strand at 1466.548 kb on - strand at 1466.564 kb on - strand at 1466.578 kb on + strand at 1466.579 kb on - strand at 1466.579 kb on - strand at 1466.624 kb on + strand at 1466.625 kb on - strand at 1466.629 kb on + strand at 1466.630 kb on - strand at 1466.634 kb on - strand at 1466.639 kb on - strand at 1466.654 kb on - strand at 1466.683 kb on + strand at 1466.765 kb on + strand at 1466.767 kb on + strand at 1466.767 kb on + strand at 1466.767 kb on + strand at 1466.767 kb on + strand at 1466.768 kb on - strand at 1466.771 kb on + strand at 1466.772 kb on - strand at 1466.799 kb on - strand at 1466.882 kb on + strand at 1466.882 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,463,830 - +1.8 1,463,841 - +1.3 1,464,185 - -4.0 1,464,233 + +0.3 1,464,233 + +0.2 1,464,254 - +0.1 1,464,298 + -0.7 1,464,356 + +0.5 1,464,494 - +1.4 1,464,496 - +0.1 1,464,650 + +0.6 1,464,697 - MCAODC_23740 0.13 -0.9 1,464,798 + MCAODC_23740 0.20 +0.5 1,464,799 - MCAODC_23740 0.20 +1.6 1,464,811 - MCAODC_23740 0.21 +0.8 1,464,822 - MCAODC_23740 0.22 +1.0 1,464,909 + MCAODC_23740 0.28 -2.8 1,464,910 - MCAODC_23740 0.28 -2.0 1,464,931 - MCAODC_23740 0.30 +1.7 1,465,523 - MCAODC_23740 0.73 +1.0 1,465,655 - MCAODC_23740 0.82 -1.6 1,466,434 + +0.3 1,466,435 - +1.6 1,466,502 + +2.3 1,466,502 + -2.9 1,466,548 - +2.7 1,466,564 - -0.1 1,466,578 + -0.3 1,466,579 - +0.1 1,466,579 - +1.1 1,466,624 + +0.9 1,466,625 - +0.3 1,466,629 + +0.8 1,466,630 - -0.0 1,466,634 - +0.1 1,466,639 - -0.3 1,466,654 - -3.1 1,466,683 + +1.5 1,466,765 + +0.0 1,466,767 + +2.1 1,466,767 + +1.2 1,466,767 + +0.3 1,466,767 + -1.0 1,466,768 - +1.5 1,466,771 + -3.1 1,466,772 - +0.5 1,466,799 - -3.0 1,466,882 + -0.8 1,466,882 + -1.6
Or see this region's nucleotide sequence