Strain Fitness in Escherichia coli ECRC101 around MCAODC_23490

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntterC and terB are separated by 22 nucleotidesterB and terA are separated by 22 nucleotides MCAODC_23485: terC - tellurium resistance membrane protein TerC, at 1,424,701 to 1,425,741 terC MCAODC_23490: terB - Tellurium resistance protein TerB, at 1,425,764 to 1,426,219 terB MCAODC_23495: terA - tellurium resistance protein TerA, at 1,426,242 to 1,427,399 terA Position (kb) 1425 1426 1427Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1424.780 kb on - strandat 1424.786 kb on + strandat 1424.786 kb on + strandat 1424.787 kb on - strandat 1424.787 kb on - strandat 1424.787 kb on - strandat 1424.787 kb on - strandat 1424.814 kb on - strand, within terCat 1424.909 kb on + strand, within terCat 1424.936 kb on + strand, within terCat 1424.937 kb on - strand, within terCat 1424.937 kb on - strand, within terCat 1424.937 kb on - strand, within terCat 1424.976 kb on + strand, within terCat 1424.976 kb on + strand, within terCat 1424.976 kb on + strand, within terCat 1424.977 kb on - strand, within terCat 1424.978 kb on + strand, within terCat 1425.041 kb on - strand, within terCat 1425.041 kb on - strand, within terCat 1425.175 kb on + strand, within terCat 1425.223 kb on - strand, within terCat 1425.229 kb on - strand, within terCat 1425.234 kb on - strand, within terCat 1425.252 kb on - strand, within terCat 1425.316 kb on - strand, within terCat 1425.319 kb on - strand, within terCat 1425.339 kb on - strand, within terCat 1425.516 kb on - strand, within terCat 1425.560 kb on + strand, within terCat 1425.561 kb on - strand, within terCat 1425.561 kb on - strand, within terCat 1425.667 kb on - strandat 1425.742 kb on - strandat 1425.879 kb on - strand, within terBat 1425.879 kb on - strand, within terBat 1425.879 kb on - strand, within terBat 1425.924 kb on + strand, within terBat 1425.924 kb on + strand, within terBat 1425.924 kb on + strand, within terBat 1425.983 kb on - strand, within terBat 1426.077 kb on - strand, within terBat 1426.109 kb on + strand, within terBat 1426.109 kb on + strand, within terBat 1426.110 kb on - strand, within terBat 1426.110 kb on - strand, within terBat 1426.110 kb on - strand, within terBat 1426.110 kb on - strand, within terBat 1426.199 kb on - strandat 1426.199 kb on - strandat 1426.220 kb on - strandat 1426.220 kb on - strandat 1426.244 kb on - strandat 1426.312 kb on + strandat 1426.313 kb on - strandat 1426.313 kb on - strandat 1426.354 kb on - strandat 1426.447 kb on - strand, within terAat 1426.484 kb on - strand, within terAat 1426.495 kb on + strand, within terAat 1426.539 kb on - strand, within terAat 1426.561 kb on - strand, within terAat 1426.561 kb on - strand, within terAat 1426.561 kb on - strand, within terAat 1426.561 kb on - strand, within terAat 1426.598 kb on - strand, within terAat 1426.598 kb on - strand, within terAat 1426.598 kb on - strand, within terAat 1426.653 kb on - strand, within terAat 1426.653 kb on - strand, within terAat 1426.653 kb on - strand, within terAat 1426.653 kb on - strand, within terAat 1426.653 kb on - strand, within terAat 1426.655 kb on - strand, within terAat 1426.869 kb on + strand, within terAat 1426.870 kb on - strand, within terAat 1426.943 kb on + strand, within terAat 1426.995 kb on - strand, within terAat 1426.995 kb on - strand, within terAat 1427.193 kb on - strand, within terAat 1427.193 kb on - strand, within terAat 1427.204 kb on - strand, within terA

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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1,424,780 - +0.2
1,424,786 + +0.9
1,424,786 + -0.8
1,424,787 - -0.3
1,424,787 - -0.0
1,424,787 - +2.1
1,424,787 - +1.3
1,424,814 - terC MCAODC_23485 0.11 -1.9
1,424,909 + terC MCAODC_23485 0.20 +0.5
1,424,936 + terC MCAODC_23485 0.23 +1.1
1,424,937 - terC MCAODC_23485 0.23 -0.6
1,424,937 - terC MCAODC_23485 0.23 +0.7
1,424,937 - terC MCAODC_23485 0.23 +3.1
1,424,976 + terC MCAODC_23485 0.26 +1.0
1,424,976 + terC MCAODC_23485 0.26 +0.9
1,424,976 + terC MCAODC_23485 0.26 +1.0
1,424,977 - terC MCAODC_23485 0.27 +0.6
1,424,978 + terC MCAODC_23485 0.27 -3.2
1,425,041 - terC MCAODC_23485 0.33 -0.2
1,425,041 - terC MCAODC_23485 0.33 +1.0
1,425,175 + terC MCAODC_23485 0.46 +0.0
1,425,223 - terC MCAODC_23485 0.50 -1.9
1,425,229 - terC MCAODC_23485 0.51 +0.7
1,425,234 - terC MCAODC_23485 0.51 -1.6
1,425,252 - terC MCAODC_23485 0.53 -1.0
1,425,316 - terC MCAODC_23485 0.59 +0.5
1,425,319 - terC MCAODC_23485 0.59 -2.0
1,425,339 - terC MCAODC_23485 0.61 -2.8
1,425,516 - terC MCAODC_23485 0.78 +1.4
1,425,560 + terC MCAODC_23485 0.83 -0.4
1,425,561 - terC MCAODC_23485 0.83 +1.4
1,425,561 - terC MCAODC_23485 0.83 -2.6
1,425,667 - -0.1
1,425,742 - -3.3
1,425,879 - terB MCAODC_23490 0.25 -0.3
1,425,879 - terB MCAODC_23490 0.25 -0.1
1,425,879 - terB MCAODC_23490 0.25 -0.3
1,425,924 + terB MCAODC_23490 0.35 -0.9
1,425,924 + terB MCAODC_23490 0.35 -0.5
1,425,924 + terB MCAODC_23490 0.35 +0.2
1,425,983 - terB MCAODC_23490 0.48 +0.2
1,426,077 - terB MCAODC_23490 0.69 +0.6
1,426,109 + terB MCAODC_23490 0.76 +0.2
1,426,109 + terB MCAODC_23490 0.76 +0.1
1,426,110 - terB MCAODC_23490 0.76 -0.2
1,426,110 - terB MCAODC_23490 0.76 -0.7
1,426,110 - terB MCAODC_23490 0.76 -1.1
1,426,110 - terB MCAODC_23490 0.76 -0.3
1,426,199 - -0.6
1,426,199 - +0.2
1,426,220 - -0.8
1,426,220 - -1.2
1,426,244 - +0.8
1,426,312 + +0.2
1,426,313 - -0.2
1,426,313 - +0.3
1,426,354 - -0.2
1,426,447 - terA MCAODC_23495 0.18 +0.5
1,426,484 - terA MCAODC_23495 0.21 -2.3
1,426,495 + terA MCAODC_23495 0.22 +0.4
1,426,539 - terA MCAODC_23495 0.26 -0.2
1,426,561 - terA MCAODC_23495 0.28 -1.1
1,426,561 - terA MCAODC_23495 0.28 -1.5
1,426,561 - terA MCAODC_23495 0.28 -1.3
1,426,561 - terA MCAODC_23495 0.28 -0.2
1,426,598 - terA MCAODC_23495 0.31 +0.5
1,426,598 - terA MCAODC_23495 0.31 -0.1
1,426,598 - terA MCAODC_23495 0.31 +0.4
1,426,653 - terA MCAODC_23495 0.35 +1.0
1,426,653 - terA MCAODC_23495 0.35 -3.9
1,426,653 - terA MCAODC_23495 0.35 +1.2
1,426,653 - terA MCAODC_23495 0.35 -3.4
1,426,653 - terA MCAODC_23495 0.35 +1.3
1,426,655 - terA MCAODC_23495 0.36 +0.9
1,426,869 + terA MCAODC_23495 0.54 -1.4
1,426,870 - terA MCAODC_23495 0.54 +0.2
1,426,943 + terA MCAODC_23495 0.61 -1.4
1,426,995 - terA MCAODC_23495 0.65 -0.6
1,426,995 - terA MCAODC_23495 0.65 -0.8
1,427,193 - terA MCAODC_23495 0.82 +1.8
1,427,193 - terA MCAODC_23495 0.82 +0.2
1,427,204 - terA MCAODC_23495 0.83 +0.2

Or see this region's nucleotide sequence