Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hipB and MCAODC_21525 are separated by 263 nucleotides MCAODC_21525 and MCAODC_21530 are separated by 72 nucleotides MCAODC_21530 and MCAODC_21535 are separated by 22 nucleotides MCAODC_21535 and MCAODC_21540 overlap by 23 nucleotides MCAODC_21540 and dicB are separated by 558 nucleotides dicB and MCAODC_21550 overlap by 4 nucleotides
MCAODC_21520: hipB - transcriptional regulator, at 1,091,483 to 1,091,890
hipB
MCAODC_21525: MCAODC_21525 - hypothetical protein, at 1,092,154 to 1,092,453
_21525
MCAODC_21530: MCAODC_21530 - Uncharacterized protein YdfC, at 1,092,526 to 1,092,744
_21530
MCAODC_21535: MCAODC_21535 - hypothetical protein, at 1,092,767 to 1,093,174
_21535
MCAODC_21540: MCAODC_21540 - hypothetical protein, at 1,093,152 to 1,093,385
_21540
MCAODC_21545: dicB - Division inhibition protein DicB, at 1,093,944 to 1,094,132
dicB
MCAODC_21550: MCAODC_21550 - DUF1482 domain-containing protein, at 1,094,129 to 1,094,320
_21550
Position (kb)
1092
1093
1094 Strain fitness (log2 ratio)
-2
-1
0
1 at 1091.940 kb on + strand at 1092.163 kb on + strand at 1092.163 kb on + strand at 1092.164 kb on - strand at 1092.166 kb on - strand at 1092.195 kb on - strand, within MCAODC_21525 at 1092.195 kb on - strand, within MCAODC_21525 at 1092.563 kb on - strand, within MCAODC_21530 at 1092.742 kb on + strand at 1092.746 kb on - strand at 1092.783 kb on + strand at 1093.132 kb on + strand, within MCAODC_21535 at 1093.335 kb on + strand, within MCAODC_21540 at 1093.489 kb on + strand at 1093.547 kb on - strand at 1093.547 kb on - strand at 1093.622 kb on + strand at 1093.861 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,091,940 + -0.6 1,092,163 + -2.5 1,092,163 + -0.1 1,092,164 - +0.2 1,092,166 - -0.2 1,092,195 - MCAODC_21525 0.14 -2.2 1,092,195 - MCAODC_21525 0.14 -2.2 1,092,563 - MCAODC_21530 0.17 -1.2 1,092,742 + -2.4 1,092,746 - +0.6 1,092,783 + +0.9 1,093,132 + MCAODC_21535 0.89 +0.1 1,093,335 + MCAODC_21540 0.78 +0.2 1,093,489 + +1.7 1,093,547 - +0.8 1,093,547 - -0.7 1,093,622 + -1.0 1,093,861 - +0.7
Or see this region's nucleotide sequence