Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiQ and yeiP are separated by 213 nucleotides yeiP and yeiW are separated by 154 nucleotides yeiW and setB overlap by 4 nucleotides
MCAODC_14465: yeiQ - Uncharacterized oxidoreductase YeiQ, at 2,845,080 to 2,846,555
yeiQ
MCAODC_14470: yeiP - elongation factor P-like protein YeiP, at 2,846,769 to 2,847,341
yeiP
MCAODC_14475: yeiW - UPF0153 protein YeiW, at 2,847,496 to 2,847,750
yeiW
MCAODC_14480: setB - sugar efflux transporter SetB, at 2,847,747 to 2,848,928
setB
Position (kb)
2847
2848 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2846.508 kb on + strand at 2846.509 kb on - strand at 2846.509 kb on - strand at 2846.509 kb on - strand at 2846.540 kb on + strand at 2846.540 kb on + strand at 2846.588 kb on + strand at 2846.596 kb on + strand at 2846.678 kb on + strand at 2846.679 kb on - strand at 2846.701 kb on + strand at 2846.712 kb on + strand at 2846.743 kb on + strand at 2846.786 kb on + strand at 2846.787 kb on - strand at 2846.787 kb on - strand at 2846.833 kb on - strand, within yeiP at 2846.836 kb on + strand, within yeiP at 2846.836 kb on + strand, within yeiP at 2846.836 kb on + strand, within yeiP at 2846.837 kb on - strand, within yeiP at 2847.063 kb on - strand, within yeiP at 2847.063 kb on - strand, within yeiP at 2847.064 kb on + strand, within yeiP at 2847.072 kb on - strand, within yeiP at 2847.073 kb on + strand, within yeiP at 2847.073 kb on + strand, within yeiP at 2847.074 kb on - strand, within yeiP at 2847.098 kb on - strand, within yeiP at 2847.115 kb on + strand, within yeiP at 2847.115 kb on + strand, within yeiP at 2847.116 kb on - strand, within yeiP at 2847.131 kb on - strand, within yeiP at 2847.312 kb on - strand at 2847.388 kb on - strand at 2847.448 kb on + strand at 2847.448 kb on + strand at 2847.449 kb on - strand at 2847.495 kb on + strand at 2847.496 kb on - strand at 2847.496 kb on - strand at 2847.496 kb on - strand at 2847.553 kb on - strand, within yeiW at 2847.586 kb on - strand, within yeiW at 2847.759 kb on - strand at 2847.769 kb on - strand at 2847.895 kb on + strand, within setB at 2847.943 kb on + strand, within setB at 2847.944 kb on - strand, within setB at 2847.987 kb on + strand, within setB at 2847.988 kb on - strand, within setB at 2848.078 kb on - strand, within setB at 2848.202 kb on + strand, within setB at 2848.202 kb on + strand, within setB at 2848.203 kb on - strand, within setB at 2848.206 kb on + strand, within setB at 2848.207 kb on - strand, within setB at 2848.225 kb on + strand, within setB at 2848.225 kb on + strand, within setB at 2848.225 kb on + strand, within setB at 2848.226 kb on - strand, within setB at 2848.226 kb on - strand, within setB at 2848.226 kb on - strand, within setB at 2848.226 kb on - strand, within setB at 2848.348 kb on - strand, within setB at 2848.402 kb on + strand, within setB at 2848.402 kb on + strand, within setB at 2848.403 kb on - strand, within setB at 2848.408 kb on - strand, within setB at 2848.432 kb on - strand, within setB at 2848.439 kb on - strand, within setB at 2848.485 kb on + strand, within setB at 2848.584 kb on - strand, within setB at 2848.616 kb on - strand, within setB at 2848.656 kb on + strand, within setB
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,846,508 + -1.0 2,846,509 - +0.3 2,846,509 - +0.4 2,846,509 - +0.6 2,846,540 + +1.3 2,846,540 + +0.8 2,846,588 + +0.1 2,846,596 + +0.8 2,846,678 + -1.9 2,846,679 - +0.6 2,846,701 + +1.3 2,846,712 + +0.1 2,846,743 + +0.6 2,846,786 + +0.8 2,846,787 - -1.2 2,846,787 - +0.5 2,846,833 - yeiP MCAODC_14470 0.11 -1.9 2,846,836 + yeiP MCAODC_14470 0.12 +1.2 2,846,836 + yeiP MCAODC_14470 0.12 +0.3 2,846,836 + yeiP MCAODC_14470 0.12 +0.4 2,846,837 - yeiP MCAODC_14470 0.12 -0.5 2,847,063 - yeiP MCAODC_14470 0.51 -0.7 2,847,063 - yeiP MCAODC_14470 0.51 +0.3 2,847,064 + yeiP MCAODC_14470 0.51 +0.6 2,847,072 - yeiP MCAODC_14470 0.53 +0.2 2,847,073 + yeiP MCAODC_14470 0.53 -1.9 2,847,073 + yeiP MCAODC_14470 0.53 -0.8 2,847,074 - yeiP MCAODC_14470 0.53 -1.6 2,847,098 - yeiP MCAODC_14470 0.57 -3.2 2,847,115 + yeiP MCAODC_14470 0.60 +1.8 2,847,115 + yeiP MCAODC_14470 0.60 -0.6 2,847,116 - yeiP MCAODC_14470 0.61 +2.2 2,847,131 - yeiP MCAODC_14470 0.63 +0.0 2,847,312 - -2.1 2,847,388 - +0.0 2,847,448 + +0.8 2,847,448 + -0.2 2,847,449 - -0.1 2,847,495 + +0.9 2,847,496 - +0.3 2,847,496 - -0.8 2,847,496 - -2.2 2,847,553 - yeiW MCAODC_14475 0.22 -1.4 2,847,586 - yeiW MCAODC_14475 0.35 +0.2 2,847,759 - +0.9 2,847,769 - +0.8 2,847,895 + setB MCAODC_14480 0.13 +0.1 2,847,943 + setB MCAODC_14480 0.17 -1.1 2,847,944 - setB MCAODC_14480 0.17 -1.8 2,847,987 + setB MCAODC_14480 0.20 +0.7 2,847,988 - setB MCAODC_14480 0.20 -1.4 2,848,078 - setB MCAODC_14480 0.28 +1.8 2,848,202 + setB MCAODC_14480 0.38 +0.1 2,848,202 + setB MCAODC_14480 0.38 +1.4 2,848,203 - setB MCAODC_14480 0.39 -1.5 2,848,206 + setB MCAODC_14480 0.39 +0.2 2,848,207 - setB MCAODC_14480 0.39 -1.3 2,848,225 + setB MCAODC_14480 0.40 -0.1 2,848,225 + setB MCAODC_14480 0.40 +0.0 2,848,225 + setB MCAODC_14480 0.40 +1.9 2,848,226 - setB MCAODC_14480 0.41 -0.2 2,848,226 - setB MCAODC_14480 0.41 +0.6 2,848,226 - setB MCAODC_14480 0.41 +1.7 2,848,226 - setB MCAODC_14480 0.41 -0.1 2,848,348 - setB MCAODC_14480 0.51 -2.2 2,848,402 + setB MCAODC_14480 0.55 +2.5 2,848,402 + setB MCAODC_14480 0.55 -0.2 2,848,403 - setB MCAODC_14480 0.55 +0.4 2,848,408 - setB MCAODC_14480 0.56 -1.3 2,848,432 - setB MCAODC_14480 0.58 -2.1 2,848,439 - setB MCAODC_14480 0.59 -1.4 2,848,485 + setB MCAODC_14480 0.62 +0.0 2,848,584 - setB MCAODC_14480 0.71 +0.8 2,848,616 - setB MCAODC_14480 0.74 -0.5 2,848,656 + setB MCAODC_14480 0.77 -2.4
Or see this region's nucleotide sequence