Strain Fitness in Escherichia coli ECRC101 around MCAODC_14470

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyeiQ and yeiP are separated by 213 nucleotidesyeiP and yeiW are separated by 154 nucleotidesyeiW and setB overlap by 4 nucleotides MCAODC_14465: yeiQ - Uncharacterized oxidoreductase YeiQ, at 2,845,080 to 2,846,555 yeiQ MCAODC_14470: yeiP - elongation factor P-like protein YeiP, at 2,846,769 to 2,847,341 yeiP MCAODC_14475: yeiW - UPF0153 protein YeiW, at 2,847,496 to 2,847,750 yeiW MCAODC_14480: setB - sugar efflux transporter SetB, at 2,847,747 to 2,848,928 setB Position (kb) 2846 2847 2848Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2845.776 kb on - strand, within yeiQat 2845.790 kb on + strand, within yeiQat 2845.906 kb on - strand, within yeiQat 2846.006 kb on + strand, within yeiQat 2846.007 kb on - strand, within yeiQat 2846.015 kb on + strand, within yeiQat 2846.016 kb on - strand, within yeiQat 2846.091 kb on + strand, within yeiQat 2846.091 kb on + strand, within yeiQat 2846.091 kb on + strand, within yeiQat 2846.091 kb on + strand, within yeiQat 2846.091 kb on + strand, within yeiQat 2846.092 kb on - strand, within yeiQat 2846.092 kb on - strand, within yeiQat 2846.102 kb on + strand, within yeiQat 2846.147 kb on + strand, within yeiQat 2846.147 kb on + strand, within yeiQat 2846.148 kb on - strand, within yeiQat 2846.148 kb on - strand, within yeiQat 2846.148 kb on - strand, within yeiQat 2846.213 kb on + strand, within yeiQat 2846.272 kb on - strand, within yeiQat 2846.310 kb on - strand, within yeiQat 2846.311 kb on + strand, within yeiQat 2846.311 kb on + strand, within yeiQat 2846.311 kb on + strand, within yeiQat 2846.313 kb on + strand, within yeiQat 2846.313 kb on + strand, within yeiQat 2846.313 kb on + strand, within yeiQat 2846.313 kb on + strand, within yeiQat 2846.313 kb on + strand, within yeiQat 2846.313 kb on + strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.314 kb on - strand, within yeiQat 2846.508 kb on + strandat 2846.509 kb on - strandat 2846.509 kb on - strandat 2846.509 kb on - strandat 2846.540 kb on + strandat 2846.540 kb on + strandat 2846.588 kb on + strandat 2846.596 kb on + strandat 2846.678 kb on + strandat 2846.679 kb on - strandat 2846.701 kb on + strandat 2846.712 kb on + strandat 2846.743 kb on + strandat 2846.786 kb on + strandat 2846.787 kb on - strandat 2846.787 kb on - strandat 2846.833 kb on - strand, within yeiPat 2846.836 kb on + strand, within yeiPat 2846.836 kb on + strand, within yeiPat 2846.836 kb on + strand, within yeiPat 2846.837 kb on - strand, within yeiPat 2847.063 kb on - strand, within yeiPat 2847.063 kb on - strand, within yeiPat 2847.064 kb on + strand, within yeiPat 2847.072 kb on - strand, within yeiPat 2847.073 kb on + strand, within yeiPat 2847.073 kb on + strand, within yeiPat 2847.074 kb on - strand, within yeiPat 2847.098 kb on - strand, within yeiPat 2847.115 kb on + strand, within yeiPat 2847.115 kb on + strand, within yeiPat 2847.116 kb on - strand, within yeiPat 2847.131 kb on - strand, within yeiPat 2847.312 kb on - strandat 2847.388 kb on - strandat 2847.448 kb on + strandat 2847.448 kb on + strandat 2847.449 kb on - strandat 2847.495 kb on + strandat 2847.496 kb on - strandat 2847.496 kb on - strandat 2847.496 kb on - strandat 2847.553 kb on - strand, within yeiWat 2847.586 kb on - strand, within yeiWat 2847.759 kb on - strandat 2847.769 kb on - strandat 2847.895 kb on + strand, within setBat 2847.943 kb on + strand, within setBat 2847.944 kb on - strand, within setBat 2847.987 kb on + strand, within setBat 2847.988 kb on - strand, within setBat 2848.078 kb on - strand, within setBat 2848.202 kb on + strand, within setBat 2848.202 kb on + strand, within setBat 2848.203 kb on - strand, within setBat 2848.206 kb on + strand, within setBat 2848.207 kb on - strand, within setBat 2848.225 kb on + strand, within setBat 2848.225 kb on + strand, within setBat 2848.225 kb on + strand, within setBat 2848.226 kb on - strand, within setBat 2848.226 kb on - strand, within setBat 2848.226 kb on - strand, within setBat 2848.226 kb on - strand, within setB

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,845,776 - yeiQ MCAODC_14465 0.47 +0.2
2,845,790 + yeiQ MCAODC_14465 0.48 -0.2
2,845,906 - yeiQ MCAODC_14465 0.56 +0.7
2,846,006 + yeiQ MCAODC_14465 0.63 -1.1
2,846,007 - yeiQ MCAODC_14465 0.63 -0.5
2,846,015 + yeiQ MCAODC_14465 0.63 +0.2
2,846,016 - yeiQ MCAODC_14465 0.63 +1.6
2,846,091 + yeiQ MCAODC_14465 0.68 -2.1
2,846,091 + yeiQ MCAODC_14465 0.68 +1.3
2,846,091 + yeiQ MCAODC_14465 0.68 +0.4
2,846,091 + yeiQ MCAODC_14465 0.68 +1.1
2,846,091 + yeiQ MCAODC_14465 0.68 -0.1
2,846,092 - yeiQ MCAODC_14465 0.69 -2.0
2,846,092 - yeiQ MCAODC_14465 0.69 -1.9
2,846,102 + yeiQ MCAODC_14465 0.69 -1.2
2,846,147 + yeiQ MCAODC_14465 0.72 -0.8
2,846,147 + yeiQ MCAODC_14465 0.72 -1.9
2,846,148 - yeiQ MCAODC_14465 0.72 +0.4
2,846,148 - yeiQ MCAODC_14465 0.72 -0.5
2,846,148 - yeiQ MCAODC_14465 0.72 -0.3
2,846,213 + yeiQ MCAODC_14465 0.77 -0.1
2,846,272 - yeiQ MCAODC_14465 0.81 +1.1
2,846,310 - yeiQ MCAODC_14465 0.83 +0.1
2,846,311 + yeiQ MCAODC_14465 0.83 -0.2
2,846,311 + yeiQ MCAODC_14465 0.83 +0.7
2,846,311 + yeiQ MCAODC_14465 0.83 -1.1
2,846,313 + yeiQ MCAODC_14465 0.84 +1.5
2,846,313 + yeiQ MCAODC_14465 0.84 -0.4
2,846,313 + yeiQ MCAODC_14465 0.84 -3.4
2,846,313 + yeiQ MCAODC_14465 0.84 +0.2
2,846,313 + yeiQ MCAODC_14465 0.84 +0.4
2,846,313 + yeiQ MCAODC_14465 0.84 +1.0
2,846,314 - yeiQ MCAODC_14465 0.84 +1.4
2,846,314 - yeiQ MCAODC_14465 0.84 +3.3
2,846,314 - yeiQ MCAODC_14465 0.84 -2.2
2,846,314 - yeiQ MCAODC_14465 0.84 +0.6
2,846,314 - yeiQ MCAODC_14465 0.84 -0.9
2,846,314 - yeiQ MCAODC_14465 0.84 +0.7
2,846,314 - yeiQ MCAODC_14465 0.84 -0.6
2,846,314 - yeiQ MCAODC_14465 0.84 -2.3
2,846,314 - yeiQ MCAODC_14465 0.84 +0.8
2,846,508 + -1.0
2,846,509 - +0.3
2,846,509 - +0.4
2,846,509 - +0.6
2,846,540 + +1.3
2,846,540 + +0.8
2,846,588 + +0.1
2,846,596 + +0.8
2,846,678 + -1.9
2,846,679 - +0.6
2,846,701 + +1.3
2,846,712 + +0.1
2,846,743 + +0.6
2,846,786 + +0.8
2,846,787 - -1.2
2,846,787 - +0.5
2,846,833 - yeiP MCAODC_14470 0.11 -1.9
2,846,836 + yeiP MCAODC_14470 0.12 +1.2
2,846,836 + yeiP MCAODC_14470 0.12 +0.3
2,846,836 + yeiP MCAODC_14470 0.12 +0.4
2,846,837 - yeiP MCAODC_14470 0.12 -0.5
2,847,063 - yeiP MCAODC_14470 0.51 -0.7
2,847,063 - yeiP MCAODC_14470 0.51 +0.3
2,847,064 + yeiP MCAODC_14470 0.51 +0.6
2,847,072 - yeiP MCAODC_14470 0.53 +0.2
2,847,073 + yeiP MCAODC_14470 0.53 -1.9
2,847,073 + yeiP MCAODC_14470 0.53 -0.8
2,847,074 - yeiP MCAODC_14470 0.53 -1.6
2,847,098 - yeiP MCAODC_14470 0.57 -3.2
2,847,115 + yeiP MCAODC_14470 0.60 +1.8
2,847,115 + yeiP MCAODC_14470 0.60 -0.6
2,847,116 - yeiP MCAODC_14470 0.61 +2.2
2,847,131 - yeiP MCAODC_14470 0.63 +0.0
2,847,312 - -2.1
2,847,388 - +0.0
2,847,448 + +0.8
2,847,448 + -0.2
2,847,449 - -0.1
2,847,495 + +0.9
2,847,496 - +0.3
2,847,496 - -0.8
2,847,496 - -2.2
2,847,553 - yeiW MCAODC_14475 0.22 -1.4
2,847,586 - yeiW MCAODC_14475 0.35 +0.2
2,847,759 - +0.9
2,847,769 - +0.8
2,847,895 + setB MCAODC_14480 0.13 +0.1
2,847,943 + setB MCAODC_14480 0.17 -1.1
2,847,944 - setB MCAODC_14480 0.17 -1.8
2,847,987 + setB MCAODC_14480 0.20 +0.7
2,847,988 - setB MCAODC_14480 0.20 -1.4
2,848,078 - setB MCAODC_14480 0.28 +1.8
2,848,202 + setB MCAODC_14480 0.38 +0.1
2,848,202 + setB MCAODC_14480 0.38 +1.4
2,848,203 - setB MCAODC_14480 0.39 -1.5
2,848,206 + setB MCAODC_14480 0.39 +0.2
2,848,207 - setB MCAODC_14480 0.39 -1.3
2,848,225 + setB MCAODC_14480 0.40 -0.1
2,848,225 + setB MCAODC_14480 0.40 +0.0
2,848,225 + setB MCAODC_14480 0.40 +1.9
2,848,226 - setB MCAODC_14480 0.41 -0.2
2,848,226 - setB MCAODC_14480 0.41 +0.6
2,848,226 - setB MCAODC_14480 0.41 +1.7
2,848,226 - setB MCAODC_14480 0.41 -0.1

Or see this region's nucleotide sequence