Strain Fitness in Escherichia coli ECRC101 around MCAODC_14375

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnarP and yejO are separated by 319 nucleotidesyejO and Pro_trna are separated by 100 nucleotidesPro_trna and yejM are separated by 74 nucleotides MCAODC_14370: narP - nitrate/nitrite response regulator protein NarP, at 2,822,844 to 2,823,491 narP MCAODC_14375: yejO - autotransporter YejO, at 2,823,811 to 2,826,402 yejO MCAODC_14380: Pro_trna - tRNA-Pro(ggg), at 2,826,503 to 2,826,579 _trna MCAODC_14385: yejM - LPS biosynthesis-modulating metalloenzyme YejM, at 2,826,654 to 2,828,414 yejM Position (kb) 2823 2824 2825 2826 2827Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2822.846 kb on - strandat 2822.846 kb on - strandat 2822.916 kb on + strand, within narPat 2822.916 kb on + strand, within narPat 2822.927 kb on + strand, within narPat 2822.931 kb on + strand, within narPat 2822.932 kb on - strand, within narPat 2822.932 kb on - strand, within narPat 2822.937 kb on + strand, within narPat 2822.937 kb on + strand, within narPat 2822.938 kb on - strand, within narPat 2822.979 kb on - strand, within narPat 2823.078 kb on + strand, within narPat 2823.079 kb on - strand, within narPat 2823.079 kb on - strand, within narPat 2823.082 kb on + strand, within narPat 2823.082 kb on + strand, within narPat 2823.243 kb on - strand, within narPat 2823.243 kb on - strand, within narPat 2823.299 kb on + strand, within narPat 2823.300 kb on - strand, within narPat 2823.441 kb on - strandat 2823.441 kb on - strandat 2823.491 kb on + strandat 2823.492 kb on - strandat 2823.492 kb on - strandat 2823.492 kb on - strandat 2823.495 kb on - strandat 2823.523 kb on - strandat 2823.549 kb on + strandat 2823.578 kb on - strandat 2823.602 kb on - strandat 2823.699 kb on - strandat 2823.751 kb on - strandat 2823.756 kb on + strandat 2823.788 kb on + strandat 2823.875 kb on + strandat 2823.875 kb on + strandat 2823.876 kb on - strandat 2823.876 kb on - strandat 2823.876 kb on - strandat 2823.887 kb on + strandat 2823.888 kb on - strandat 2823.888 kb on - strandat 2823.911 kb on - strandat 2824.008 kb on + strandat 2824.026 kb on - strandat 2824.030 kb on - strandat 2824.030 kb on - strandat 2824.033 kb on - strandat 2824.036 kb on - strandat 2824.060 kb on + strandat 2824.146 kb on + strand, within yejOat 2824.166 kb on + strand, within yejOat 2824.167 kb on - strand, within yejOat 2824.399 kb on - strand, within yejOat 2824.462 kb on + strand, within yejOat 2824.464 kb on + strand, within yejOat 2824.464 kb on + strand, within yejOat 2824.467 kb on + strand, within yejOat 2824.475 kb on + strand, within yejOat 2824.479 kb on + strand, within yejOat 2824.490 kb on + strand, within yejOat 2824.530 kb on + strand, within yejOat 2824.585 kb on - strand, within yejOat 2824.659 kb on + strand, within yejOat 2824.660 kb on - strand, within yejOat 2824.665 kb on + strand, within yejOat 2824.765 kb on + strand, within yejOat 2824.797 kb on + strand, within yejOat 2824.797 kb on + strand, within yejOat 2824.799 kb on + strand, within yejOat 2824.804 kb on + strand, within yejOat 2824.804 kb on + strand, within yejOat 2824.804 kb on + strand, within yejOat 2824.917 kb on + strand, within yejOat 2824.988 kb on + strand, within yejOat 2825.094 kb on + strand, within yejOat 2825.134 kb on - strand, within yejOat 2825.191 kb on - strand, within yejOat 2825.231 kb on - strand, within yejOat 2825.346 kb on + strand, within yejOat 2825.347 kb on - strand, within yejOat 2825.352 kb on + strand, within yejOat 2825.352 kb on + strand, within yejOat 2825.352 kb on + strand, within yejOat 2825.353 kb on - strand, within yejOat 2825.388 kb on + strand, within yejOat 2825.425 kb on - strand, within yejOat 2825.434 kb on + strand, within yejOat 2825.434 kb on + strand, within yejOat 2825.435 kb on - strand, within yejOat 2825.435 kb on - strand, within yejOat 2825.436 kb on + strand, within yejOat 2825.436 kb on + strand, within yejOat 2825.436 kb on + strand, within yejOat 2825.436 kb on + strand, within yejOat 2825.436 kb on + strand, within yejOat 2825.460 kb on + strand, within yejOat 2825.460 kb on + strand, within yejOat 2825.461 kb on - strand, within yejOat 2825.543 kb on + strand, within yejOat 2825.543 kb on + strand, within yejOat 2825.588 kb on + strand, within yejOat 2825.588 kb on + strand, within yejOat 2825.588 kb on + strand, within yejOat 2825.589 kb on - strand, within yejOat 2825.631 kb on + strand, within yejOat 2825.811 kb on + strand, within yejOat 2825.811 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.815 kb on + strand, within yejOat 2825.816 kb on - strand, within yejOat 2825.816 kb on - strand, within yejOat 2825.816 kb on - strand, within yejOat 2825.818 kb on - strand, within yejOat 2825.860 kb on + strand, within yejOat 2825.860 kb on + strand, within yejOat 2825.860 kb on + strand, within yejOat 2825.860 kb on + strand, within yejOat 2825.860 kb on + strand, within yejOat 2825.861 kb on - strand, within yejOat 2825.919 kb on + strand, within yejOat 2825.945 kb on - strand, within yejOat 2825.949 kb on + strand, within yejOat 2825.949 kb on + strand, within yejOat 2826.019 kb on + strand, within yejOat 2826.019 kb on + strand, within yejOat 2826.058 kb on + strand, within yejOat 2826.107 kb on + strand, within yejOat 2826.131 kb on + strand, within yejOat 2826.136 kb on + strand, within yejOat 2826.137 kb on - strand, within yejOat 2826.202 kb on + strandat 2826.213 kb on + strandat 2826.214 kb on - strandat 2826.249 kb on + strandat 2826.337 kb on + strandat 2826.572 kb on - strandat 2826.572 kb on - strandat 2826.595 kb on + strandat 2826.596 kb on - strandat 2826.624 kb on - strandat 2826.646 kb on - strandat 2826.646 kb on - strandat 2826.687 kb on + strandat 2826.705 kb on + strandat 2826.742 kb on - strandat 2826.748 kb on + strandat 2826.749 kb on - strandat 2826.749 kb on - strandat 2826.749 kb on - strandat 2826.758 kb on - strandat 2826.762 kb on - strandat 2826.762 kb on - strandat 2826.838 kb on + strand, within yejMat 2826.906 kb on + strand, within yejMat 2826.907 kb on - strand, within yejMat 2826.907 kb on - strand, within yejMat 2826.907 kb on - strand, within yejMat 2826.960 kb on - strand, within yejMat 2826.960 kb on - strand, within yejMat 2826.963 kb on - strand, within yejMat 2826.963 kb on - strand, within yejMat 2827.077 kb on - strand, within yejMat 2827.077 kb on - strand, within yejMat 2827.088 kb on + strand, within yejMat 2827.169 kb on - strand, within yejMat 2827.169 kb on - strand, within yejMat 2827.209 kb on - strand, within yejMat 2827.209 kb on - strand, within yejMat 2827.212 kb on - strand, within yejMat 2827.258 kb on + strand, within yejMat 2827.314 kb on + strand, within yejMat 2827.315 kb on - strand, within yejMat 2827.368 kb on - strand, within yejMat 2827.387 kb on - strand, within yejM

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,822,846 - +1.7
2,822,846 - -1.7
2,822,916 + narP MCAODC_14370 0.11 +0.2
2,822,916 + narP MCAODC_14370 0.11 -2.2
2,822,927 + narP MCAODC_14370 0.13 +0.6
2,822,931 + narP MCAODC_14370 0.13 +2.2
2,822,932 - narP MCAODC_14370 0.14 -0.1
2,822,932 - narP MCAODC_14370 0.14 -0.3
2,822,937 + narP MCAODC_14370 0.14 +0.3
2,822,937 + narP MCAODC_14370 0.14 -1.4
2,822,938 - narP MCAODC_14370 0.15 +0.6
2,822,979 - narP MCAODC_14370 0.21 -0.0
2,823,078 + narP MCAODC_14370 0.36 +0.3
2,823,079 - narP MCAODC_14370 0.36 -2.6
2,823,079 - narP MCAODC_14370 0.36 -1.8
2,823,082 + narP MCAODC_14370 0.37 +0.6
2,823,082 + narP MCAODC_14370 0.37 +2.1
2,823,243 - narP MCAODC_14370 0.62 +0.3
2,823,243 - narP MCAODC_14370 0.62 -1.5
2,823,299 + narP MCAODC_14370 0.70 -1.4
2,823,300 - narP MCAODC_14370 0.70 +1.3
2,823,441 - -3.6
2,823,441 - -1.0
2,823,491 + -0.1
2,823,492 - +2.2
2,823,492 - +0.7
2,823,492 - -1.1
2,823,495 - +1.1
2,823,523 - -2.5
2,823,549 + -1.1
2,823,578 - +0.2
2,823,602 - -0.0
2,823,699 - -0.5
2,823,751 - -0.8
2,823,756 + +2.7
2,823,788 + -0.6
2,823,875 + +1.0
2,823,875 + +0.1
2,823,876 - +0.4
2,823,876 - -2.5
2,823,876 - -0.0
2,823,887 + -2.7
2,823,888 - -0.6
2,823,888 - -3.3
2,823,911 - +0.6
2,824,008 + +1.7
2,824,026 - +0.7
2,824,030 - +2.6
2,824,030 - +0.6
2,824,033 - -0.4
2,824,036 - +0.6
2,824,060 + -1.2
2,824,146 + yejO MCAODC_14375 0.13 +0.1
2,824,166 + yejO MCAODC_14375 0.14 +0.9
2,824,167 - yejO MCAODC_14375 0.14 +1.2
2,824,399 - yejO MCAODC_14375 0.23 -1.0
2,824,462 + yejO MCAODC_14375 0.25 +0.5
2,824,464 + yejO MCAODC_14375 0.25 +0.2
2,824,464 + yejO MCAODC_14375 0.25 -1.9
2,824,467 + yejO MCAODC_14375 0.25 -2.9
2,824,475 + yejO MCAODC_14375 0.26 +1.2
2,824,479 + yejO MCAODC_14375 0.26 -0.5
2,824,490 + yejO MCAODC_14375 0.26 -0.6
2,824,530 + yejO MCAODC_14375 0.28 +0.4
2,824,585 - yejO MCAODC_14375 0.30 +0.0
2,824,659 + yejO MCAODC_14375 0.33 -0.7
2,824,660 - yejO MCAODC_14375 0.33 +0.6
2,824,665 + yejO MCAODC_14375 0.33 -1.6
2,824,765 + yejO MCAODC_14375 0.37 +1.3
2,824,797 + yejO MCAODC_14375 0.38 +1.4
2,824,797 + yejO MCAODC_14375 0.38 -0.1
2,824,799 + yejO MCAODC_14375 0.38 +0.6
2,824,804 + yejO MCAODC_14375 0.38 +0.5
2,824,804 + yejO MCAODC_14375 0.38 -3.8
2,824,804 + yejO MCAODC_14375 0.38 -1.5
2,824,917 + yejO MCAODC_14375 0.43 -1.9
2,824,988 + yejO MCAODC_14375 0.45 +0.5
2,825,094 + yejO MCAODC_14375 0.49 -2.0
2,825,134 - yejO MCAODC_14375 0.51 +1.7
2,825,191 - yejO MCAODC_14375 0.53 +0.4
2,825,231 - yejO MCAODC_14375 0.55 -1.9
2,825,346 + yejO MCAODC_14375 0.59 +0.3
2,825,347 - yejO MCAODC_14375 0.59 -1.2
2,825,352 + yejO MCAODC_14375 0.59 -0.4
2,825,352 + yejO MCAODC_14375 0.59 +0.8
2,825,352 + yejO MCAODC_14375 0.59 +0.6
2,825,353 - yejO MCAODC_14375 0.59 +0.1
2,825,388 + yejO MCAODC_14375 0.61 -1.4
2,825,425 - yejO MCAODC_14375 0.62 -0.4
2,825,434 + yejO MCAODC_14375 0.63 +0.6
2,825,434 + yejO MCAODC_14375 0.63 +2.5
2,825,435 - yejO MCAODC_14375 0.63 -1.5
2,825,435 - yejO MCAODC_14375 0.63 +1.8
2,825,436 + yejO MCAODC_14375 0.63 -1.5
2,825,436 + yejO MCAODC_14375 0.63 -1.3
2,825,436 + yejO MCAODC_14375 0.63 -1.6
2,825,436 + yejO MCAODC_14375 0.63 +1.1
2,825,436 + yejO MCAODC_14375 0.63 +1.7
2,825,460 + yejO MCAODC_14375 0.64 +0.0
2,825,460 + yejO MCAODC_14375 0.64 +0.7
2,825,461 - yejO MCAODC_14375 0.64 -2.3
2,825,543 + yejO MCAODC_14375 0.67 +0.8
2,825,543 + yejO MCAODC_14375 0.67 +0.8
2,825,588 + yejO MCAODC_14375 0.69 +1.7
2,825,588 + yejO MCAODC_14375 0.69 +0.7
2,825,588 + yejO MCAODC_14375 0.69 +0.6
2,825,589 - yejO MCAODC_14375 0.69 -0.5
2,825,631 + yejO MCAODC_14375 0.70 +0.2
2,825,811 + yejO MCAODC_14375 0.77 +2.1
2,825,811 + yejO MCAODC_14375 0.77 -0.6
2,825,815 + yejO MCAODC_14375 0.77 +0.2
2,825,815 + yejO MCAODC_14375 0.77 +0.8
2,825,815 + yejO MCAODC_14375 0.77 +0.4
2,825,815 + yejO MCAODC_14375 0.77 +0.1
2,825,815 + yejO MCAODC_14375 0.77 -1.2
2,825,815 + yejO MCAODC_14375 0.77 +0.5
2,825,815 + yejO MCAODC_14375 0.77 -0.6
2,825,816 - yejO MCAODC_14375 0.77 -1.3
2,825,816 - yejO MCAODC_14375 0.77 +0.6
2,825,816 - yejO MCAODC_14375 0.77 +1.5
2,825,818 - yejO MCAODC_14375 0.77 +1.1
2,825,860 + yejO MCAODC_14375 0.79 +1.1
2,825,860 + yejO MCAODC_14375 0.79 -0.1
2,825,860 + yejO MCAODC_14375 0.79 +0.9
2,825,860 + yejO MCAODC_14375 0.79 +1.1
2,825,860 + yejO MCAODC_14375 0.79 +0.8
2,825,861 - yejO MCAODC_14375 0.79 +1.2
2,825,919 + yejO MCAODC_14375 0.81 -0.4
2,825,945 - yejO MCAODC_14375 0.82 +1.6
2,825,949 + yejO MCAODC_14375 0.82 +0.5
2,825,949 + yejO MCAODC_14375 0.82 +0.7
2,826,019 + yejO MCAODC_14375 0.85 -0.5
2,826,019 + yejO MCAODC_14375 0.85 +0.5
2,826,058 + yejO MCAODC_14375 0.87 +0.6
2,826,107 + yejO MCAODC_14375 0.89 -0.4
2,826,131 + yejO MCAODC_14375 0.90 +0.9
2,826,136 + yejO MCAODC_14375 0.90 -0.2
2,826,137 - yejO MCAODC_14375 0.90 -1.1
2,826,202 + +0.1
2,826,213 + -0.0
2,826,214 - -2.7
2,826,249 + -1.5
2,826,337 + -1.1
2,826,572 - +1.0
2,826,572 - -0.2
2,826,595 + -1.0
2,826,596 - +0.9
2,826,624 - -0.2
2,826,646 - -3.2
2,826,646 - -1.0
2,826,687 + +1.2
2,826,705 + -2.4
2,826,742 - -1.5
2,826,748 + -0.1
2,826,749 - +1.1
2,826,749 - -2.7
2,826,749 - -0.7
2,826,758 - +1.4
2,826,762 - -0.0
2,826,762 - -2.8
2,826,838 + yejM MCAODC_14385 0.10 +1.7
2,826,906 + yejM MCAODC_14385 0.14 -3.6
2,826,907 - yejM MCAODC_14385 0.14 +0.2
2,826,907 - yejM MCAODC_14385 0.14 -0.9
2,826,907 - yejM MCAODC_14385 0.14 -0.2
2,826,960 - yejM MCAODC_14385 0.17 -0.5
2,826,960 - yejM MCAODC_14385 0.17 -0.7
2,826,963 - yejM MCAODC_14385 0.18 +0.8
2,826,963 - yejM MCAODC_14385 0.18 +0.7
2,827,077 - yejM MCAODC_14385 0.24 -1.7
2,827,077 - yejM MCAODC_14385 0.24 -0.1
2,827,088 + yejM MCAODC_14385 0.25 -2.2
2,827,169 - yejM MCAODC_14385 0.29 +0.9
2,827,169 - yejM MCAODC_14385 0.29 +1.0
2,827,209 - yejM MCAODC_14385 0.32 -0.2
2,827,209 - yejM MCAODC_14385 0.32 -0.1
2,827,212 - yejM MCAODC_14385 0.32 +0.1
2,827,258 + yejM MCAODC_14385 0.34 -2.3
2,827,314 + yejM MCAODC_14385 0.37 +1.3
2,827,315 - yejM MCAODC_14385 0.38 -1.1
2,827,368 - yejM MCAODC_14385 0.41 +1.3
2,827,387 - yejM MCAODC_14385 0.42 -3.1

Or see this region's nucleotide sequence