Strain Fitness in Escherichia coli ECRC101 around MCAODC_14175

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnrdA and yfaL are separated by 695 nucleotidesyfaL and ubiG are separated by 140 nucleotides MCAODC_14170: nrdA - ribonucleoside-diphosphate reductase subunit alpha, at 2,774,787 to 2,777,072 nrdA MCAODC_14175: yfaL - AIDA-I family autotransporter adhesin YfaL/EhaC, at 2,777,768 to 2,781,520 yfaL MCAODC_14180: ubiG - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 2,781,661 to 2,782,383 ubiG Position (kb) 2777 2778 2779 2780 2781 2782Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 2777.267 kb on + strandat 2777.319 kb on - strandat 2777.319 kb on - strandat 2777.322 kb on + strandat 2777.372 kb on + strandat 2777.878 kb on + strandat 2777.878 kb on + strandat 2777.879 kb on - strandat 2778.034 kb on - strandat 2778.092 kb on + strandat 2778.205 kb on + strand, within yfaLat 2778.208 kb on + strand, within yfaLat 2778.314 kb on + strand, within yfaLat 2778.314 kb on + strand, within yfaLat 2778.351 kb on - strand, within yfaLat 2778.352 kb on + strand, within yfaLat 2778.406 kb on + strand, within yfaLat 2778.444 kb on + strand, within yfaLat 2778.448 kb on + strand, within yfaLat 2778.461 kb on - strand, within yfaLat 2778.466 kb on + strand, within yfaLat 2778.497 kb on + strand, within yfaLat 2778.497 kb on + strand, within yfaLat 2778.499 kb on + strand, within yfaLat 2778.499 kb on + strand, within yfaLat 2778.499 kb on + strand, within yfaLat 2778.500 kb on - strand, within yfaLat 2778.637 kb on + strand, within yfaLat 2778.638 kb on - strand, within yfaLat 2778.638 kb on - strand, within yfaLat 2778.641 kb on + strand, within yfaLat 2778.642 kb on - strand, within yfaLat 2778.662 kb on - strand, within yfaLat 2778.703 kb on + strand, within yfaLat 2778.730 kb on + strand, within yfaLat 2778.781 kb on + strand, within yfaLat 2778.781 kb on + strand, within yfaLat 2778.782 kb on - strand, within yfaLat 2778.782 kb on - strand, within yfaLat 2778.782 kb on - strand, within yfaLat 2778.782 kb on - strand, within yfaLat 2778.782 kb on - strand, within yfaLat 2778.790 kb on + strand, within yfaLat 2778.791 kb on - strand, within yfaLat 2778.905 kb on + strand, within yfaLat 2778.905 kb on + strand, within yfaLat 2778.931 kb on + strand, within yfaLat 2778.931 kb on + strand, within yfaLat 2778.931 kb on + strand, within yfaLat 2778.931 kb on + strand, within yfaLat 2778.932 kb on - strand, within yfaLat 2778.932 kb on - strand, within yfaLat 2778.935 kb on + strand, within yfaLat 2778.935 kb on + strand, within yfaLat 2778.954 kb on + strand, within yfaLat 2778.955 kb on - strand, within yfaLat 2779.017 kb on + strand, within yfaLat 2779.042 kb on + strand, within yfaLat 2779.115 kb on + strand, within yfaLat 2779.115 kb on + strand, within yfaLat 2779.115 kb on + strand, within yfaLat 2779.116 kb on - strand, within yfaLat 2779.116 kb on - strand, within yfaLat 2779.156 kb on + strand, within yfaLat 2779.156 kb on + strand, within yfaLat 2779.158 kb on + strand, within yfaLat 2779.158 kb on + strand, within yfaLat 2779.158 kb on + strand, within yfaLat 2779.159 kb on - strand, within yfaLat 2779.159 kb on - strand, within yfaLat 2779.294 kb on + strand, within yfaLat 2779.294 kb on + strand, within yfaLat 2779.295 kb on - strand, within yfaLat 2779.302 kb on - strand, within yfaLat 2779.302 kb on - strand, within yfaLat 2779.418 kb on + strand, within yfaLat 2779.419 kb on - strand, within yfaLat 2779.419 kb on - strand, within yfaLat 2779.472 kb on + strand, within yfaLat 2779.535 kb on + strand, within yfaLat 2779.536 kb on - strand, within yfaLat 2779.538 kb on - strand, within yfaLat 2779.538 kb on - strand, within yfaLat 2779.544 kb on + strand, within yfaLat 2779.544 kb on + strand, within yfaLat 2779.544 kb on + strand, within yfaLat 2779.558 kb on + strand, within yfaLat 2779.621 kb on + strand, within yfaLat 2779.747 kb on + strand, within yfaLat 2779.759 kb on + strand, within yfaLat 2779.799 kb on - strand, within yfaLat 2779.821 kb on + strand, within yfaLat 2779.865 kb on + strand, within yfaLat 2779.866 kb on - strand, within yfaLat 2779.907 kb on - strand, within yfaLat 2779.924 kb on + strand, within yfaLat 2779.925 kb on - strand, within yfaLat 2779.925 kb on - strand, within yfaLat 2779.943 kb on - strand, within yfaLat 2780.002 kb on + strand, within yfaLat 2780.002 kb on + strand, within yfaLat 2780.003 kb on - strand, within yfaLat 2780.003 kb on - strand, within yfaLat 2780.033 kb on - strand, within yfaLat 2780.090 kb on - strand, within yfaLat 2780.090 kb on - strand, within yfaLat 2780.092 kb on + strand, within yfaLat 2780.093 kb on - strand, within yfaLat 2780.158 kb on + strand, within yfaLat 2780.158 kb on + strand, within yfaLat 2780.158 kb on + strand, within yfaLat 2780.159 kb on - strand, within yfaLat 2780.222 kb on + strand, within yfaLat 2780.222 kb on + strand, within yfaLat 2780.223 kb on - strand, within yfaLat 2780.223 kb on - strand, within yfaLat 2780.225 kb on - strand, within yfaLat 2780.302 kb on + strand, within yfaLat 2780.305 kb on + strand, within yfaLat 2780.306 kb on - strand, within yfaLat 2780.332 kb on + strand, within yfaLat 2780.374 kb on + strand, within yfaLat 2780.455 kb on + strand, within yfaLat 2780.465 kb on + strand, within yfaLat 2780.466 kb on - strand, within yfaLat 2780.489 kb on - strand, within yfaLat 2780.489 kb on - strand, within yfaLat 2780.502 kb on - strand, within yfaLat 2780.521 kb on - strand, within yfaLat 2780.605 kb on + strand, within yfaLat 2780.605 kb on + strand, within yfaLat 2780.605 kb on + strand, within yfaLat 2780.605 kb on + strand, within yfaLat 2780.606 kb on - strand, within yfaLat 2780.683 kb on + strand, within yfaLat 2780.684 kb on - strand, within yfaLat 2780.684 kb on - strand, within yfaLat 2780.733 kb on + strand, within yfaLat 2780.754 kb on - strand, within yfaLat 2780.800 kb on + strand, within yfaLat 2780.800 kb on + strand, within yfaLat 2780.800 kb on + strand, within yfaLat 2780.801 kb on - strand, within yfaLat 2780.801 kb on - strand, within yfaLat 2781.027 kb on - strand, within yfaLat 2781.037 kb on + strand, within yfaLat 2781.037 kb on + strand, within yfaLat 2781.037 kb on + strand, within yfaLat 2781.078 kb on - strand, within yfaLat 2781.094 kb on + strand, within yfaLat 2781.241 kb on + strandat 2781.261 kb on + strandat 2781.295 kb on - strandat 2781.303 kb on + strandat 2781.304 kb on - strandat 2781.304 kb on - strandat 2781.315 kb on - strandat 2781.362 kb on - strandat 2781.418 kb on + strandat 2781.519 kb on - strandat 2781.539 kb on + strandat 2781.540 kb on - strandat 2781.540 kb on - strandat 2781.557 kb on - strandat 2781.590 kb on - strandat 2781.598 kb on + strandat 2781.599 kb on - strandat 2781.666 kb on + strandat 2782.394 kb on - strandat 2782.421 kb on - strandat 2782.422 kb on + strandat 2782.423 kb on - strandat 2782.423 kb on - strandat 2782.423 kb on - strandat 2782.442 kb on + strandat 2782.442 kb on + strandat 2782.443 kb on - strandat 2782.451 kb on + strandat 2782.451 kb on + strandat 2782.451 kb on + strandat 2782.451 kb on + strandat 2782.451 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,777,267 + -0.6
2,777,319 - -1.6
2,777,319 - +1.2
2,777,322 + +1.1
2,777,372 + +1.7
2,777,878 + +0.9
2,777,878 + +0.6
2,777,879 - +0.9
2,778,034 - -0.7
2,778,092 + +3.0
2,778,205 + yfaL MCAODC_14175 0.12 -0.3
2,778,208 + yfaL MCAODC_14175 0.12 +1.6
2,778,314 + yfaL MCAODC_14175 0.15 -0.7
2,778,314 + yfaL MCAODC_14175 0.15 -0.8
2,778,351 - yfaL MCAODC_14175 0.16 +0.7
2,778,352 + yfaL MCAODC_14175 0.16 -0.6
2,778,406 + yfaL MCAODC_14175 0.17 +0.3
2,778,444 + yfaL MCAODC_14175 0.18 +0.5
2,778,448 + yfaL MCAODC_14175 0.18 +2.4
2,778,461 - yfaL MCAODC_14175 0.18 +1.5
2,778,466 + yfaL MCAODC_14175 0.19 -3.3
2,778,497 + yfaL MCAODC_14175 0.19 -0.1
2,778,497 + yfaL MCAODC_14175 0.19 +1.6
2,778,499 + yfaL MCAODC_14175 0.19 +0.3
2,778,499 + yfaL MCAODC_14175 0.19 -3.3
2,778,499 + yfaL MCAODC_14175 0.19 +0.9
2,778,500 - yfaL MCAODC_14175 0.20 +0.3
2,778,637 + yfaL MCAODC_14175 0.23 +0.7
2,778,638 - yfaL MCAODC_14175 0.23 +0.8
2,778,638 - yfaL MCAODC_14175 0.23 +0.6
2,778,641 + yfaL MCAODC_14175 0.23 -0.1
2,778,642 - yfaL MCAODC_14175 0.23 -0.2
2,778,662 - yfaL MCAODC_14175 0.24 +0.6
2,778,703 + yfaL MCAODC_14175 0.25 +0.5
2,778,730 + yfaL MCAODC_14175 0.26 +0.1
2,778,781 + yfaL MCAODC_14175 0.27 +5.2
2,778,781 + yfaL MCAODC_14175 0.27 +0.8
2,778,782 - yfaL MCAODC_14175 0.27 -0.1
2,778,782 - yfaL MCAODC_14175 0.27 +0.8
2,778,782 - yfaL MCAODC_14175 0.27 -2.1
2,778,782 - yfaL MCAODC_14175 0.27 +1.0
2,778,782 - yfaL MCAODC_14175 0.27 -1.7
2,778,790 + yfaL MCAODC_14175 0.27 -3.6
2,778,791 - yfaL MCAODC_14175 0.27 -0.4
2,778,905 + yfaL MCAODC_14175 0.30 +0.0
2,778,905 + yfaL MCAODC_14175 0.30 +1.3
2,778,931 + yfaL MCAODC_14175 0.31 +2.6
2,778,931 + yfaL MCAODC_14175 0.31 +1.4
2,778,931 + yfaL MCAODC_14175 0.31 +0.9
2,778,931 + yfaL MCAODC_14175 0.31 +0.7
2,778,932 - yfaL MCAODC_14175 0.31 +1.4
2,778,932 - yfaL MCAODC_14175 0.31 -0.6
2,778,935 + yfaL MCAODC_14175 0.31 +0.2
2,778,935 + yfaL MCAODC_14175 0.31 +2.6
2,778,954 + yfaL MCAODC_14175 0.32 +1.0
2,778,955 - yfaL MCAODC_14175 0.32 -2.6
2,779,017 + yfaL MCAODC_14175 0.33 +3.0
2,779,042 + yfaL MCAODC_14175 0.34 -0.6
2,779,115 + yfaL MCAODC_14175 0.36 +1.5
2,779,115 + yfaL MCAODC_14175 0.36 +0.2
2,779,115 + yfaL MCAODC_14175 0.36 +1.0
2,779,116 - yfaL MCAODC_14175 0.36 +0.7
2,779,116 - yfaL MCAODC_14175 0.36 -0.2
2,779,156 + yfaL MCAODC_14175 0.37 +0.3
2,779,156 + yfaL MCAODC_14175 0.37 +0.9
2,779,158 + yfaL MCAODC_14175 0.37 +0.5
2,779,158 + yfaL MCAODC_14175 0.37 -1.1
2,779,158 + yfaL MCAODC_14175 0.37 -3.1
2,779,159 - yfaL MCAODC_14175 0.37 +0.6
2,779,159 - yfaL MCAODC_14175 0.37 +1.5
2,779,294 + yfaL MCAODC_14175 0.41 -0.0
2,779,294 + yfaL MCAODC_14175 0.41 -3.2
2,779,295 - yfaL MCAODC_14175 0.41 -2.0
2,779,302 - yfaL MCAODC_14175 0.41 +4.8
2,779,302 - yfaL MCAODC_14175 0.41 +0.1
2,779,418 + yfaL MCAODC_14175 0.44 -1.9
2,779,419 - yfaL MCAODC_14175 0.44 -1.7
2,779,419 - yfaL MCAODC_14175 0.44 +0.6
2,779,472 + yfaL MCAODC_14175 0.45 -1.0
2,779,535 + yfaL MCAODC_14175 0.47 +0.3
2,779,536 - yfaL MCAODC_14175 0.47 +1.0
2,779,538 - yfaL MCAODC_14175 0.47 +0.9
2,779,538 - yfaL MCAODC_14175 0.47 +0.3
2,779,544 + yfaL MCAODC_14175 0.47 +0.2
2,779,544 + yfaL MCAODC_14175 0.47 -1.2
2,779,544 + yfaL MCAODC_14175 0.47 -1.0
2,779,558 + yfaL MCAODC_14175 0.48 -0.4
2,779,621 + yfaL MCAODC_14175 0.49 -3.4
2,779,747 + yfaL MCAODC_14175 0.53 -2.6
2,779,759 + yfaL MCAODC_14175 0.53 -1.3
2,779,799 - yfaL MCAODC_14175 0.54 -0.7
2,779,821 + yfaL MCAODC_14175 0.55 -0.8
2,779,865 + yfaL MCAODC_14175 0.56 -0.3
2,779,866 - yfaL MCAODC_14175 0.56 +0.5
2,779,907 - yfaL MCAODC_14175 0.57 -2.6
2,779,924 + yfaL MCAODC_14175 0.57 +0.7
2,779,925 - yfaL MCAODC_14175 0.57 +0.5
2,779,925 - yfaL MCAODC_14175 0.57 +1.1
2,779,943 - yfaL MCAODC_14175 0.58 +3.3
2,780,002 + yfaL MCAODC_14175 0.60 -0.3
2,780,002 + yfaL MCAODC_14175 0.60 +1.7
2,780,003 - yfaL MCAODC_14175 0.60 +0.9
2,780,003 - yfaL MCAODC_14175 0.60 -0.5
2,780,033 - yfaL MCAODC_14175 0.60 +0.2
2,780,090 - yfaL MCAODC_14175 0.62 -0.1
2,780,090 - yfaL MCAODC_14175 0.62 +0.5
2,780,092 + yfaL MCAODC_14175 0.62 +0.0
2,780,093 - yfaL MCAODC_14175 0.62 +0.5
2,780,158 + yfaL MCAODC_14175 0.64 +0.1
2,780,158 + yfaL MCAODC_14175 0.64 -0.7
2,780,158 + yfaL MCAODC_14175 0.64 +1.2
2,780,159 - yfaL MCAODC_14175 0.64 -2.9
2,780,222 + yfaL MCAODC_14175 0.65 -0.3
2,780,222 + yfaL MCAODC_14175 0.65 +1.1
2,780,223 - yfaL MCAODC_14175 0.65 +1.5
2,780,223 - yfaL MCAODC_14175 0.65 +1.2
2,780,225 - yfaL MCAODC_14175 0.65 +1.6
2,780,302 + yfaL MCAODC_14175 0.68 +1.3
2,780,305 + yfaL MCAODC_14175 0.68 +0.2
2,780,306 - yfaL MCAODC_14175 0.68 -0.5
2,780,332 + yfaL MCAODC_14175 0.68 -3.1
2,780,374 + yfaL MCAODC_14175 0.69 -1.1
2,780,455 + yfaL MCAODC_14175 0.72 +0.9
2,780,465 + yfaL MCAODC_14175 0.72 +1.7
2,780,466 - yfaL MCAODC_14175 0.72 +1.1
2,780,489 - yfaL MCAODC_14175 0.73 -0.2
2,780,489 - yfaL MCAODC_14175 0.73 +0.9
2,780,502 - yfaL MCAODC_14175 0.73 -1.8
2,780,521 - yfaL MCAODC_14175 0.73 -0.9
2,780,605 + yfaL MCAODC_14175 0.76 -0.1
2,780,605 + yfaL MCAODC_14175 0.76 -2.2
2,780,605 + yfaL MCAODC_14175 0.76 +1.9
2,780,605 + yfaL MCAODC_14175 0.76 -0.5
2,780,606 - yfaL MCAODC_14175 0.76 -2.6
2,780,683 + yfaL MCAODC_14175 0.78 +1.7
2,780,684 - yfaL MCAODC_14175 0.78 +2.2
2,780,684 - yfaL MCAODC_14175 0.78 -0.2
2,780,733 + yfaL MCAODC_14175 0.79 -1.2
2,780,754 - yfaL MCAODC_14175 0.80 -0.4
2,780,800 + yfaL MCAODC_14175 0.81 -2.8
2,780,800 + yfaL MCAODC_14175 0.81 -1.8
2,780,800 + yfaL MCAODC_14175 0.81 +0.4
2,780,801 - yfaL MCAODC_14175 0.81 -1.8
2,780,801 - yfaL MCAODC_14175 0.81 -1.5
2,781,027 - yfaL MCAODC_14175 0.87 -0.1
2,781,037 + yfaL MCAODC_14175 0.87 -2.1
2,781,037 + yfaL MCAODC_14175 0.87 +0.2
2,781,037 + yfaL MCAODC_14175 0.87 -0.1
2,781,078 - yfaL MCAODC_14175 0.88 +2.4
2,781,094 + yfaL MCAODC_14175 0.89 -2.5
2,781,241 + +1.1
2,781,261 + -3.9
2,781,295 - +0.3
2,781,303 + +1.1
2,781,304 - +2.1
2,781,304 - +2.3
2,781,315 - +0.3
2,781,362 - +0.9
2,781,418 + +0.1
2,781,519 - -0.0
2,781,539 + +3.8
2,781,540 - +1.2
2,781,540 - +0.7
2,781,557 - +0.8
2,781,590 - -0.4
2,781,598 + +1.5
2,781,599 - +1.6
2,781,666 + -1.3
2,782,394 - -0.8
2,782,421 - +0.1
2,782,422 + +1.3
2,782,423 - +0.7
2,782,423 - +0.5
2,782,423 - +0.3
2,782,442 + -0.2
2,782,442 + -1.4
2,782,443 - +0.4
2,782,451 + +0.2
2,782,451 + -3.2
2,782,451 + -0.1
2,782,451 + -1.4
2,782,451 + +1.9

Or see this region's nucleotide sequence