Strain Fitness in Escherichia coli ECRC101 around MCAODC_11380

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,261,313	-	aRO8	MCAODC_11375	0.37	-0.7
2,261,493	+	aRO8	MCAODC_11375	0.51	+0.2
2,261,534	+	aRO8	MCAODC_11375	0.54	+1.1
2,261,535	-	aRO8	MCAODC_11375	0.54	+1.5
2,261,535	-	aRO8	MCAODC_11375	0.54	+1.6
2,261,541	+	aRO8	MCAODC_11375	0.55	+0.6
2,261,541	+	aRO8	MCAODC_11375	0.55	-1.2
2,261,542	-	aRO8	MCAODC_11375	0.55	-0.8
2,261,542	-	aRO8	MCAODC_11375	0.55	+0.3
2,261,545	+	aRO8	MCAODC_11375	0.55	-0.3
2,261,552	+	aRO8	MCAODC_11375	0.55	+0.4
2,261,571	+	aRO8	MCAODC_11375	0.57	+0.8
2,261,586	+	aRO8	MCAODC_11375	0.58	+1.6
2,261,586	+	aRO8	MCAODC_11375	0.58	-1.2
2,261,587	-	aRO8	MCAODC_11375	0.58	+0.8
2,261,599	+	aRO8	MCAODC_11375	0.59	-3.4
2,261,599	+	aRO8	MCAODC_11375	0.59	-2.2
2,261,599	+	aRO8	MCAODC_11375	0.59	+0.9
2,261,642	+	aRO8	MCAODC_11375	0.62	-0.9
2,261,795	+	aRO8	MCAODC_11375	0.74	+1.0
2,261,872	+	aRO8	MCAODC_11375	0.79	-0.4
2,261,873	-	aRO8	MCAODC_11375	0.79	+0.5
2,261,908	-	aRO8	MCAODC_11375	0.82	-1.1
2,261,908	-	aRO8	MCAODC_11375	0.82	+0.7
2,261,908	-	aRO8	MCAODC_11375	0.82	+1.2
2,261,966	+	aRO8	MCAODC_11375	0.86	-1.2
2,261,973	+	aRO8	MCAODC_11375	0.87	+0.9
2,261,994	+	aRO8	MCAODC_11375	0.88	+0.1
2,261,994	+	aRO8	MCAODC_11375	0.88	-1.2
2,262,068	+				-2.2
2,262,103	-				-0.7
2,262,103	-				+0.2
2,262,116	+				+1.3
2,262,141	-				+0.8
2,262,145	+				-0.9
2,262,146	-				-0.1
2,262,175	+				-1.0
2,262,175	+				-0.7
2,262,175	+				+0.0
2,262,175	+				-1.1
2,262,176	-				+0.5
2,262,176	-				+0.3
2,262,176	-				+1.0
2,262,177	+				-1.2
2,262,178	-				-0.9
2,262,178	-				-2.5
2,262,230	+				-0.7
2,262,231	-				-0.4
2,262,231	-				+0.5
2,262,305	+				-0.4
2,262,305	+				-0.2
2,262,306	-				+0.2
2,262,335	+	ygaM	MCAODC_11380	0.12	-2.0
2,262,335	+	ygaM	MCAODC_11380	0.12	-0.4
2,262,335	+	ygaM	MCAODC_11380	0.12	+1.3
2,262,335	+	ygaM	MCAODC_11380	0.12	+0.0
2,262,340	-	ygaM	MCAODC_11380	0.13	+0.3
2,262,362	+	ygaM	MCAODC_11380	0.20	+0.8
2,262,362	+	ygaM	MCAODC_11380	0.20	+0.1
2,262,403	-	ygaM	MCAODC_11380	0.32	+0.7
2,262,403	-	ygaM	MCAODC_11380	0.32	-1.3
2,262,435	-	ygaM	MCAODC_11380	0.42	-3.0
2,262,556	-	ygaM	MCAODC_11380	0.78	-1.2
2,262,626	+				+1.2
2,262,626	+				-0.3
2,262,626	+				-1.2
2,262,626	+				+0.1
2,262,626	+				+0.5
2,262,626	+				+1.7
2,262,626	+				-0.7
2,262,627	-				+1.8
2,262,627	-				+0.4
2,262,651	+				+0.9
2,262,664	-				+1.2
2,262,664	-				-0.7
2,262,740	+				+0.8
2,262,746	-				+0.5
2,262,746	-				+1.2
2,262,760	+				+0.3
2,262,761	-				-0.1
2,262,777	+				+0.5
2,262,777	+				+1.4
2,262,778	-				+0.9
2,262,781	+				-0.8
2,262,781	+				+0.3
2,262,781	+				+0.2
2,262,782	-				-1.4
2,262,782	-				+0.6
2,262,782	-				+0.5
2,262,782	-				+0.0
2,262,809	+				+1.8
2,262,809	+				+0.0
2,262,829	-	ygaC	MCAODC_11385	0.15	+2.5
2,262,856	+	ygaC	MCAODC_11385	0.23	+0.3
2,262,857	-	ygaC	MCAODC_11385	0.23	+0.3
2,262,881	-	ygaC	MCAODC_11385	0.30	+2.2
2,262,881	-	ygaC	MCAODC_11385	0.30	+0.7
2,262,886	+	ygaC	MCAODC_11385	0.31	+0.4
2,262,886	+	ygaC	MCAODC_11385	0.31	+0.1
2,262,886	+	ygaC	MCAODC_11385	0.31	+0.5
2,262,886	+	ygaC	MCAODC_11385	0.31	+0.5
2,262,886	+	ygaC	MCAODC_11385	0.31	-2.1
2,262,886	+	ygaC	MCAODC_11385	0.31	+0.6
2,262,887	-	ygaC	MCAODC_11385	0.32	+0.7
2,262,927	-	ygaC	MCAODC_11385	0.43	+0.2
2,262,941	+	ygaC	MCAODC_11385	0.47	+0.3
2,263,000	+	ygaC	MCAODC_11385	0.64	-0.0
2,263,001	-	ygaC	MCAODC_11385	0.65	+1.4
2,263,019	-	ygaC	MCAODC_11385	0.70	-0.7
2,263,019	-	ygaC	MCAODC_11385	0.70	+1.4
2,263,065	+	ygaC	MCAODC_11385	0.83	-1.5
2,263,103	+				+0.2
2,263,168	+				-0.1
2,263,169	-				+1.0
2,263,208	+	alaE	MCAODC_11390	0.11	+0.2
2,263,279	-	alaE	MCAODC_11390	0.27	+0.1
2,263,322	+	alaE	MCAODC_11390	0.36	+2.8
2,263,322	+	alaE	MCAODC_11390	0.36	+2.2
2,263,322	+	alaE	MCAODC_11390	0.36	-2.4
2,263,323	-	alaE	MCAODC_11390	0.36	-0.6
2,263,323	-	alaE	MCAODC_11390	0.36	-2.5
2,263,323	-	alaE	MCAODC_11390	0.36	-0.4
2,263,346	+	alaE	MCAODC_11390	0.42	+0.4
2,263,346	+	alaE	MCAODC_11390	0.42	+0.7
2,263,347	-	alaE	MCAODC_11390	0.42	+0.2
2,263,347	-	alaE	MCAODC_11390	0.42	+1.4
2,263,347	-	alaE	MCAODC_11390	0.42	+1.2
2,263,425	-	alaE	MCAODC_11390	0.59	+0.3
2,263,428	+	alaE	MCAODC_11390	0.60	-0.8
2,263,428	+	alaE	MCAODC_11390	0.60	+0.2
2,263,429	-	alaE	MCAODC_11390	0.60	-0.3
2,263,429	-	alaE	MCAODC_11390	0.60	-0.3
2,263,429	-	alaE	MCAODC_11390	0.60	+1.2
2,263,429	-	alaE	MCAODC_11390	0.60	-1.4
2,263,429	-	alaE	MCAODC_11390	0.60	-1.6
2,263,433	+	alaE	MCAODC_11390	0.61	+0.3
2,263,448	-	alaE	MCAODC_11390	0.64	-0.4
2,263,448	-	alaE	MCAODC_11390	0.64	+0.3
2,263,448	-	alaE	MCAODC_11390	0.64	-2.1
2,263,448	-	alaE	MCAODC_11390	0.64	-0.8
2,263,525	-	alaE	MCAODC_11390	0.81	+0.4
2,263,525	-	alaE	MCAODC_11390	0.81	+0.5
2,263,525	-	alaE	MCAODC_11390	0.81	+0.4
2,263,525	-	alaE	MCAODC_11390	0.81	-1.7
2,263,547	+	alaE	MCAODC_11390	0.86	+0.1
2,263,548	-	alaE	MCAODC_11390	0.86	-0.6
2,263,567	-				-0.1
2,263,567	-				+0.1
2,263,611	+				+0.9
2,263,612	-				+1.7
2,263,621	+				+0.5
2,263,625	-				-1.3