Strain Fitness in Escherichia coli ECRC101 around MCAODC_10805

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nteno and ygcG are separated by 59 nucleotidesygcG and ygcG overlap by 4 nucleotides MCAODC_10800: eno - phosphopyruvate hydratase, at 2,154,457 to 2,155,755 eno MCAODC_10805: ygcG - TPM-phosphatase domain-containing protein, at 2,155,815 to 2,156,729 ygcG MCAODC_10810: ygcG - TPM-phosphatase domain-containing protein, at 2,156,726 to 2,157,874 ygcG Position (kb) 2155 2156 2157Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2155.732 kb on - strandat 2155.753 kb on + strandat 2155.753 kb on + strandat 2155.754 kb on - strandat 2155.805 kb on + strandat 2155.941 kb on - strand, within ygcGat 2155.941 kb on - strand, within ygcGat 2156.089 kb on - strand, within ygcGat 2156.098 kb on + strand, within ygcGat 2156.099 kb on - strand, within ygcGat 2156.178 kb on + strand, within ygcGat 2156.179 kb on - strand, within ygcGat 2156.181 kb on - strand, within ygcGat 2156.185 kb on - strand, within ygcGat 2156.216 kb on + strand, within ygcGat 2156.221 kb on + strand, within ygcGat 2156.221 kb on + strand, within ygcGat 2156.222 kb on - strand, within ygcGat 2156.292 kb on + strand, within ygcGat 2156.335 kb on - strand, within ygcGat 2156.335 kb on - strand, within ygcGat 2156.335 kb on - strand, within ygcGat 2156.336 kb on + strand, within ygcGat 2156.437 kb on - strand, within ygcGat 2156.442 kb on - strand, within ygcGat 2156.459 kb on + strand, within ygcGat 2156.460 kb on - strand, within ygcGat 2156.460 kb on - strand, within ygcGat 2156.460 kb on - strand, within ygcGat 2156.493 kb on - strand, within ygcGat 2156.493 kb on - strand, within ygcGat 2156.535 kb on + strand, within ygcGat 2156.535 kb on + strand, within ygcGat 2156.536 kb on - strand, within ygcGat 2156.538 kb on + strand, within ygcGat 2156.538 kb on + strand, within ygcGat 2156.561 kb on + strand, within ygcGat 2156.562 kb on - strand, within ygcGat 2156.567 kb on + strand, within ygcGat 2156.568 kb on - strand, within ygcGat 2156.700 kb on + strandat 2156.705 kb on + strandat 2156.713 kb on - strandat 2156.857 kb on + strand, within ygcGat 2156.858 kb on - strand, within ygcGat 2156.945 kb on - strand, within ygcGat 2156.971 kb on + strand, within ygcGat 2157.004 kb on + strand, within ygcGat 2157.004 kb on + strand, within ygcGat 2157.005 kb on - strand, within ygcGat 2157.112 kb on + strand, within ygcGat 2157.113 kb on - strand, within ygcGat 2157.130 kb on + strand, within ygcGat 2157.171 kb on - strand, within ygcGat 2157.176 kb on + strand, within ygcGat 2157.177 kb on - strand, within ygcGat 2157.177 kb on - strand, within ygcGat 2157.269 kb on + strand, within ygcGat 2157.404 kb on - strand, within ygcGat 2157.496 kb on + strand, within ygcGat 2157.599 kb on + strand, within ygcGat 2157.600 kb on - strand, within ygcGat 2157.605 kb on - strand, within ygcGat 2157.605 kb on - strand, within ygcGat 2157.605 kb on - strand, within ygcGat 2157.645 kb on + strand, within ygcGat 2157.645 kb on + strand, within ygcGat 2157.645 kb on + strand, within ygcGat 2157.646 kb on - strand, within ygcGat 2157.646 kb on - strand, within ygcGat 2157.646 kb on - strand, within ygcGat 2157.647 kb on + strand, within ygcGat 2157.648 kb on - strand, within ygcGat 2157.655 kb on - strand, within ygcGat 2157.703 kb on + strand, within ygcG

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,155,732 - -0.6
2,155,753 + -0.3
2,155,753 + -2.1
2,155,754 - -0.7
2,155,805 + +0.7
2,155,941 - ygcG MCAODC_10805 0.14 +0.9
2,155,941 - ygcG MCAODC_10805 0.14 +1.1
2,156,089 - ygcG MCAODC_10805 0.30 +0.7
2,156,098 + ygcG MCAODC_10805 0.31 +1.3
2,156,099 - ygcG MCAODC_10805 0.31 +0.2
2,156,178 + ygcG MCAODC_10805 0.40 -0.4
2,156,179 - ygcG MCAODC_10805 0.40 -0.9
2,156,181 - ygcG MCAODC_10805 0.40 -0.1
2,156,185 - ygcG MCAODC_10805 0.40 +1.1
2,156,216 + ygcG MCAODC_10805 0.44 -2.0
2,156,221 + ygcG MCAODC_10805 0.44 +0.6
2,156,221 + ygcG MCAODC_10805 0.44 -0.7
2,156,222 - ygcG MCAODC_10805 0.44 -0.4
2,156,292 + ygcG MCAODC_10805 0.52 -1.4
2,156,335 - ygcG MCAODC_10805 0.57 +1.2
2,156,335 - ygcG MCAODC_10805 0.57 +0.9
2,156,335 - ygcG MCAODC_10805 0.57 -1.4
2,156,336 + ygcG MCAODC_10805 0.57 -0.6
2,156,437 - ygcG MCAODC_10805 0.68 +0.6
2,156,442 - ygcG MCAODC_10805 0.69 +0.5
2,156,459 + ygcG MCAODC_10805 0.70 -2.6
2,156,460 - ygcG MCAODC_10805 0.70 -0.5
2,156,460 - ygcG MCAODC_10805 0.70 +1.2
2,156,460 - ygcG MCAODC_10805 0.70 +0.5
2,156,493 - ygcG MCAODC_10805 0.74 -0.2
2,156,493 - ygcG MCAODC_10805 0.74 +0.9
2,156,535 + ygcG MCAODC_10805 0.79 +0.7
2,156,535 + ygcG MCAODC_10805 0.79 +0.5
2,156,536 - ygcG MCAODC_10805 0.79 -0.6
2,156,538 + ygcG MCAODC_10805 0.79 +2.3
2,156,538 + ygcG MCAODC_10805 0.79 -0.0
2,156,561 + ygcG MCAODC_10805 0.82 -1.0
2,156,562 - ygcG MCAODC_10805 0.82 -2.0
2,156,567 + ygcG MCAODC_10805 0.82 +0.8
2,156,568 - ygcG MCAODC_10805 0.82 -1.1
2,156,700 + -1.1
2,156,705 + +1.7
2,156,713 - +1.4
2,156,857 + ygcG MCAODC_10810 0.11 -0.0
2,156,858 - ygcG MCAODC_10810 0.11 -0.1
2,156,945 - ygcG MCAODC_10810 0.19 -1.1
2,156,971 + ygcG MCAODC_10810 0.21 -1.6
2,157,004 + ygcG MCAODC_10810 0.24 -2.6
2,157,004 + ygcG MCAODC_10810 0.24 +1.0
2,157,005 - ygcG MCAODC_10810 0.24 -2.1
2,157,112 + ygcG MCAODC_10810 0.34 +0.7
2,157,113 - ygcG MCAODC_10810 0.34 -1.0
2,157,130 + ygcG MCAODC_10810 0.35 +0.9
2,157,171 - ygcG MCAODC_10810 0.39 -0.3
2,157,176 + ygcG MCAODC_10810 0.39 -0.6
2,157,177 - ygcG MCAODC_10810 0.39 -1.5
2,157,177 - ygcG MCAODC_10810 0.39 -2.0
2,157,269 + ygcG MCAODC_10810 0.47 +0.3
2,157,404 - ygcG MCAODC_10810 0.59 -0.4
2,157,496 + ygcG MCAODC_10810 0.67 +0.4
2,157,599 + ygcG MCAODC_10810 0.76 +1.0
2,157,600 - ygcG MCAODC_10810 0.76 -0.0
2,157,605 - ygcG MCAODC_10810 0.77 -3.0
2,157,605 - ygcG MCAODC_10810 0.77 +0.7
2,157,605 - ygcG MCAODC_10810 0.77 -1.4
2,157,645 + ygcG MCAODC_10810 0.80 +0.1
2,157,645 + ygcG MCAODC_10810 0.80 -0.6
2,157,645 + ygcG MCAODC_10810 0.80 +0.6
2,157,646 - ygcG MCAODC_10810 0.80 +0.2
2,157,646 - ygcG MCAODC_10810 0.80 -0.8
2,157,646 - ygcG MCAODC_10810 0.80 -2.4
2,157,647 + ygcG MCAODC_10810 0.80 +1.1
2,157,648 - ygcG MCAODC_10810 0.80 -0.3
2,157,655 - ygcG MCAODC_10810 0.81 +1.0
2,157,703 + ygcG MCAODC_10810 0.85 -0.6

Or see this region's nucleotide sequence