Strain Fitness in Escherichia coli ECRC101 around MCAODC_10185

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmocA and yqeC are separated by 102 nucleotidesyqeC and yqeB are separated by 47 nucleotides MCAODC_10180: mocA - molybdenum cofactor cytidylyltransferase, at 2,030,908 to 2,031,486 mocA MCAODC_10185: yqeC - selenium cofactor biosynthesis protein YqeC, at 2,031,589 to 2,032,359 yqeC MCAODC_10190: yqeB - selenium-dependent molybdenum cofactor biosynthesis protein YqeB, at 2,032,407 to 2,034,032 yqeB Position (kb) 2031 2032 2033Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2030.599 kb on - strandat 2030.603 kb on + strandat 2030.603 kb on + strandat 2030.603 kb on + strandat 2030.604 kb on - strandat 2030.604 kb on - strandat 2030.605 kb on + strandat 2030.605 kb on + strandat 2030.606 kb on - strandat 2030.606 kb on - strandat 2030.612 kb on - strandat 2030.760 kb on - strandat 2030.790 kb on - strandat 2030.805 kb on + strandat 2030.805 kb on + strandat 2030.806 kb on - strandat 2030.806 kb on - strandat 2030.806 kb on - strandat 2030.807 kb on + strandat 2030.844 kb on + strandat 2030.851 kb on - strandat 2030.940 kb on + strandat 2031.012 kb on + strand, within mocAat 2031.031 kb on - strand, within mocAat 2031.039 kb on + strand, within mocAat 2031.040 kb on - strand, within mocAat 2031.121 kb on + strand, within mocAat 2031.247 kb on + strand, within mocAat 2031.250 kb on + strand, within mocAat 2031.263 kb on + strand, within mocAat 2031.264 kb on - strand, within mocAat 2031.282 kb on + strand, within mocAat 2031.282 kb on + strand, within mocAat 2031.288 kb on + strand, within mocAat 2031.305 kb on + strand, within mocAat 2031.448 kb on + strandat 2031.463 kb on - strandat 2031.466 kb on + strandat 2031.466 kb on + strandat 2031.467 kb on - strandat 2031.467 kb on - strandat 2031.468 kb on + strandat 2031.469 kb on - strandat 2031.469 kb on - strandat 2031.486 kb on + strandat 2031.498 kb on + strandat 2031.502 kb on + strandat 2031.502 kb on + strandat 2031.504 kb on + strandat 2031.533 kb on + strandat 2031.534 kb on - strandat 2031.549 kb on - strandat 2031.580 kb on + strandat 2031.597 kb on + strandat 2031.629 kb on + strandat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.756 kb on + strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.757 kb on - strand, within yqeCat 2031.762 kb on + strand, within yqeCat 2031.762 kb on + strand, within yqeCat 2031.763 kb on - strand, within yqeCat 2031.763 kb on - strand, within yqeCat 2031.828 kb on + strand, within yqeCat 2031.828 kb on + strand, within yqeCat 2031.828 kb on + strand, within yqeCat 2031.828 kb on + strand, within yqeCat 2031.828 kb on + strand, within yqeCat 2031.829 kb on - strand, within yqeCat 2031.829 kb on - strand, within yqeCat 2031.829 kb on - strand, within yqeCat 2031.829 kb on - strand, within yqeCat 2031.829 kb on - strand, within yqeCat 2031.892 kb on - strand, within yqeCat 2031.938 kb on + strand, within yqeCat 2031.938 kb on + strand, within yqeCat 2031.938 kb on + strand, within yqeCat 2031.939 kb on - strand, within yqeCat 2031.977 kb on + strand, within yqeCat 2031.978 kb on - strand, within yqeCat 2032.050 kb on + strand, within yqeCat 2032.050 kb on + strand, within yqeCat 2032.050 kb on + strand, within yqeCat 2032.051 kb on - strand, within yqeCat 2032.051 kb on - strand, within yqeCat 2032.108 kb on - strand, within yqeCat 2032.194 kb on - strand, within yqeCat 2032.194 kb on - strand, within yqeCat 2032.295 kb on + strandat 2032.295 kb on + strandat 2032.296 kb on - strandat 2032.319 kb on + strandat 2032.319 kb on + strandat 2032.320 kb on - strandat 2032.320 kb on - strandat 2032.460 kb on + strandat 2032.460 kb on + strandat 2032.472 kb on + strandat 2032.517 kb on - strandat 2032.536 kb on - strandat 2032.611 kb on - strand, within yqeBat 2032.621 kb on + strand, within yqeBat 2032.634 kb on + strand, within yqeBat 2032.634 kb on + strand, within yqeBat 2032.634 kb on + strand, within yqeBat 2032.634 kb on + strand, within yqeBat 2032.634 kb on + strand, within yqeBat 2032.635 kb on - strand, within yqeBat 2032.694 kb on + strand, within yqeBat 2032.709 kb on + strand, within yqeBat 2032.709 kb on + strand, within yqeBat 2032.710 kb on - strand, within yqeBat 2032.710 kb on - strand, within yqeBat 2032.781 kb on - strand, within yqeBat 2032.791 kb on - strand, within yqeBat 2032.805 kb on + strand, within yqeBat 2032.809 kb on + strand, within yqeBat 2032.834 kb on + strand, within yqeBat 2032.835 kb on - strand, within yqeBat 2032.934 kb on + strand, within yqeBat 2032.934 kb on + strand, within yqeBat 2033.063 kb on + strand, within yqeBat 2033.063 kb on + strand, within yqeBat 2033.063 kb on + strand, within yqeBat 2033.064 kb on - strand, within yqeBat 2033.064 kb on - strand, within yqeBat 2033.064 kb on - strand, within yqeBat 2033.064 kb on - strand, within yqeBat 2033.064 kb on - strand, within yqeBat 2033.064 kb on - strand, within yqeBat 2033.074 kb on + strand, within yqeBat 2033.074 kb on + strand, within yqeBat 2033.074 kb on + strand, within yqeBat 2033.074 kb on + strand, within yqeBat 2033.074 kb on + strand, within yqeBat 2033.075 kb on - strand, within yqeBat 2033.075 kb on - strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.098 kb on + strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.099 kb on - strand, within yqeBat 2033.146 kb on + strand, within yqeBat 2033.147 kb on - strand, within yqeBat 2033.149 kb on + strand, within yqeBat 2033.149 kb on + strand, within yqeBat 2033.149 kb on + strand, within yqeBat 2033.150 kb on - strand, within yqeBat 2033.260 kb on + strand, within yqeBat 2033.283 kb on - strand, within yqeBat 2033.327 kb on + strand, within yqeB

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,030,599 - +0.7
2,030,603 + +0.0
2,030,603 + -1.8
2,030,603 + +0.8
2,030,604 - -0.3
2,030,604 - +0.7
2,030,605 + +0.6
2,030,605 + -2.4
2,030,606 - -1.5
2,030,606 - +0.7
2,030,612 - -0.5
2,030,760 - +1.0
2,030,790 - -2.6
2,030,805 + +0.7
2,030,805 + -0.1
2,030,806 - -0.7
2,030,806 - +0.0
2,030,806 - -1.3
2,030,807 + -2.3
2,030,844 + +1.7
2,030,851 - +0.2
2,030,940 + -0.7
2,031,012 + mocA MCAODC_10180 0.18 +0.7
2,031,031 - mocA MCAODC_10180 0.21 +0.8
2,031,039 + mocA MCAODC_10180 0.23 -0.1
2,031,040 - mocA MCAODC_10180 0.23 -1.2
2,031,121 + mocA MCAODC_10180 0.37 +0.5
2,031,247 + mocA MCAODC_10180 0.59 +0.7
2,031,250 + mocA MCAODC_10180 0.59 -0.6
2,031,263 + mocA MCAODC_10180 0.61 -0.4
2,031,264 - mocA MCAODC_10180 0.61 -0.2
2,031,282 + mocA MCAODC_10180 0.65 +1.4
2,031,282 + mocA MCAODC_10180 0.65 +0.6
2,031,288 + mocA MCAODC_10180 0.66 -0.4
2,031,305 + mocA MCAODC_10180 0.69 -1.2
2,031,448 + +0.2
2,031,463 - -0.5
2,031,466 + +0.4
2,031,466 + +1.7
2,031,467 - +0.3
2,031,467 - -0.0
2,031,468 + -0.6
2,031,469 - +0.6
2,031,469 - -0.3
2,031,486 + +0.2
2,031,498 + -1.7
2,031,502 + -0.2
2,031,502 + -0.2
2,031,504 + -1.4
2,031,533 + +1.2
2,031,534 - -1.2
2,031,549 - -0.2
2,031,580 + +2.5
2,031,597 + -2.4
2,031,629 + -1.0
2,031,756 + yqeC MCAODC_10185 0.22 +0.6
2,031,756 + yqeC MCAODC_10185 0.22 -0.6
2,031,756 + yqeC MCAODC_10185 0.22 -3.4
2,031,756 + yqeC MCAODC_10185 0.22 +0.1
2,031,756 + yqeC MCAODC_10185 0.22 -0.5
2,031,756 + yqeC MCAODC_10185 0.22 +0.3
2,031,756 + yqeC MCAODC_10185 0.22 +0.4
2,031,756 + yqeC MCAODC_10185 0.22 -2.9
2,031,756 + yqeC MCAODC_10185 0.22 +0.9
2,031,757 - yqeC MCAODC_10185 0.22 +1.9
2,031,757 - yqeC MCAODC_10185 0.22 +1.8
2,031,757 - yqeC MCAODC_10185 0.22 -0.3
2,031,757 - yqeC MCAODC_10185 0.22 +0.2
2,031,757 - yqeC MCAODC_10185 0.22 -0.4
2,031,757 - yqeC MCAODC_10185 0.22 -0.8
2,031,757 - yqeC MCAODC_10185 0.22 +0.5
2,031,762 + yqeC MCAODC_10185 0.22 -0.5
2,031,762 + yqeC MCAODC_10185 0.22 -0.1
2,031,763 - yqeC MCAODC_10185 0.23 +1.7
2,031,763 - yqeC MCAODC_10185 0.23 -0.5
2,031,828 + yqeC MCAODC_10185 0.31 +1.2
2,031,828 + yqeC MCAODC_10185 0.31 -0.7
2,031,828 + yqeC MCAODC_10185 0.31 -0.3
2,031,828 + yqeC MCAODC_10185 0.31 +0.3
2,031,828 + yqeC MCAODC_10185 0.31 +1.7
2,031,829 - yqeC MCAODC_10185 0.31 -0.8
2,031,829 - yqeC MCAODC_10185 0.31 +0.7
2,031,829 - yqeC MCAODC_10185 0.31 -1.3
2,031,829 - yqeC MCAODC_10185 0.31 -0.7
2,031,829 - yqeC MCAODC_10185 0.31 -1.8
2,031,892 - yqeC MCAODC_10185 0.39 -0.0
2,031,938 + yqeC MCAODC_10185 0.45 -0.9
2,031,938 + yqeC MCAODC_10185 0.45 +1.1
2,031,938 + yqeC MCAODC_10185 0.45 +0.1
2,031,939 - yqeC MCAODC_10185 0.45 +0.0
2,031,977 + yqeC MCAODC_10185 0.50 -0.2
2,031,978 - yqeC MCAODC_10185 0.50 -0.2
2,032,050 + yqeC MCAODC_10185 0.60 +0.3
2,032,050 + yqeC MCAODC_10185 0.60 +1.8
2,032,050 + yqeC MCAODC_10185 0.60 +0.1
2,032,051 - yqeC MCAODC_10185 0.60 +1.4
2,032,051 - yqeC MCAODC_10185 0.60 -0.1
2,032,108 - yqeC MCAODC_10185 0.67 -0.5
2,032,194 - yqeC MCAODC_10185 0.78 +0.2
2,032,194 - yqeC MCAODC_10185 0.78 +0.8
2,032,295 + +0.6
2,032,295 + -1.2
2,032,296 - +0.6
2,032,319 + +0.3
2,032,319 + -1.1
2,032,320 - -0.0
2,032,320 - +0.1
2,032,460 + -0.8
2,032,460 + +1.4
2,032,472 + +1.5
2,032,517 - -1.0
2,032,536 - +0.4
2,032,611 - yqeB MCAODC_10190 0.13 +1.1
2,032,621 + yqeB MCAODC_10190 0.13 +0.6
2,032,634 + yqeB MCAODC_10190 0.14 +1.0
2,032,634 + yqeB MCAODC_10190 0.14 +2.7
2,032,634 + yqeB MCAODC_10190 0.14 +0.8
2,032,634 + yqeB MCAODC_10190 0.14 +0.5
2,032,634 + yqeB MCAODC_10190 0.14 -0.5
2,032,635 - yqeB MCAODC_10190 0.14 -2.5
2,032,694 + yqeB MCAODC_10190 0.18 +0.7
2,032,709 + yqeB MCAODC_10190 0.19 +1.3
2,032,709 + yqeB MCAODC_10190 0.19 -0.4
2,032,710 - yqeB MCAODC_10190 0.19 -0.9
2,032,710 - yqeB MCAODC_10190 0.19 +0.3
2,032,781 - yqeB MCAODC_10190 0.23 -1.5
2,032,791 - yqeB MCAODC_10190 0.24 +0.5
2,032,805 + yqeB MCAODC_10190 0.24 -0.5
2,032,809 + yqeB MCAODC_10190 0.25 +0.2
2,032,834 + yqeB MCAODC_10190 0.26 +0.5
2,032,835 - yqeB MCAODC_10190 0.26 +2.3
2,032,934 + yqeB MCAODC_10190 0.32 +1.7
2,032,934 + yqeB MCAODC_10190 0.32 -0.7
2,033,063 + yqeB MCAODC_10190 0.40 +1.0
2,033,063 + yqeB MCAODC_10190 0.40 -0.0
2,033,063 + yqeB MCAODC_10190 0.40 +0.3
2,033,064 - yqeB MCAODC_10190 0.40 -0.4
2,033,064 - yqeB MCAODC_10190 0.40 -1.1
2,033,064 - yqeB MCAODC_10190 0.40 +1.8
2,033,064 - yqeB MCAODC_10190 0.40 -0.4
2,033,064 - yqeB MCAODC_10190 0.40 +2.0
2,033,064 - yqeB MCAODC_10190 0.40 -1.0
2,033,074 + yqeB MCAODC_10190 0.41 +1.6
2,033,074 + yqeB MCAODC_10190 0.41 -3.0
2,033,074 + yqeB MCAODC_10190 0.41 +0.7
2,033,074 + yqeB MCAODC_10190 0.41 -0.8
2,033,074 + yqeB MCAODC_10190 0.41 -1.5
2,033,075 - yqeB MCAODC_10190 0.41 +0.2
2,033,075 - yqeB MCAODC_10190 0.41 -0.4
2,033,098 + yqeB MCAODC_10190 0.42 +1.2
2,033,098 + yqeB MCAODC_10190 0.42 +0.3
2,033,098 + yqeB MCAODC_10190 0.42 +2.3
2,033,098 + yqeB MCAODC_10190 0.42 +1.3
2,033,098 + yqeB MCAODC_10190 0.42 -0.3
2,033,098 + yqeB MCAODC_10190 0.42 -2.8
2,033,098 + yqeB MCAODC_10190 0.42 +2.2
2,033,098 + yqeB MCAODC_10190 0.42 +0.1
2,033,098 + yqeB MCAODC_10190 0.42 +2.3
2,033,099 - yqeB MCAODC_10190 0.43 -0.4
2,033,099 - yqeB MCAODC_10190 0.43 -1.4
2,033,099 - yqeB MCAODC_10190 0.43 -0.3
2,033,099 - yqeB MCAODC_10190 0.43 -0.6
2,033,099 - yqeB MCAODC_10190 0.43 -0.7
2,033,099 - yqeB MCAODC_10190 0.43 -1.2
2,033,099 - yqeB MCAODC_10190 0.43 +0.1
2,033,099 - yqeB MCAODC_10190 0.43 -2.3
2,033,099 - yqeB MCAODC_10190 0.43 -0.1
2,033,099 - yqeB MCAODC_10190 0.43 +0.8
2,033,146 + yqeB MCAODC_10190 0.45 -3.7
2,033,147 - yqeB MCAODC_10190 0.46 +0.4
2,033,149 + yqeB MCAODC_10190 0.46 +0.8
2,033,149 + yqeB MCAODC_10190 0.46 +1.3
2,033,149 + yqeB MCAODC_10190 0.46 +1.0
2,033,150 - yqeB MCAODC_10190 0.46 -1.1
2,033,260 + yqeB MCAODC_10190 0.52 +1.3
2,033,283 - yqeB MCAODC_10190 0.54 -0.9
2,033,327 + yqeB MCAODC_10190 0.57 +0.5

Or see this region's nucleotide sequence