Strain Fitness in Escherichia coli ECRC101 around MCAODC_10055

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,000,738	+	gcvP	MCAODC_10050	0.73	+2.4
2,000,838	-	gcvP	MCAODC_10050	0.77	+0.8
2,000,838	-	gcvP	MCAODC_10050	0.77	+0.3
2,000,910	-	gcvP	MCAODC_10050	0.79	+0.5
2,000,931	+	gcvP	MCAODC_10050	0.80	+0.6
2,000,931	+	gcvP	MCAODC_10050	0.80	+0.4
2,000,931	+	gcvP	MCAODC_10050	0.80	-0.1
2,000,931	+	gcvP	MCAODC_10050	0.80	+0.1
2,000,932	-	gcvP	MCAODC_10050	0.80	-3.0
2,000,997	+	gcvP	MCAODC_10050	0.82	-2.9
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.6
2,000,997	+	gcvP	MCAODC_10050	0.82	+2.2
2,000,997	+	gcvP	MCAODC_10050	0.82	-0.1
2,000,997	+	gcvP	MCAODC_10050	0.82	+1.7
2,000,997	+	gcvP	MCAODC_10050	0.82	-1.0
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.5
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.6
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.8
2,000,997	+	gcvP	MCAODC_10050	0.82	-3.3
2,000,998	-	gcvP	MCAODC_10050	0.82	+0.5
2,000,998	-	gcvP	MCAODC_10050	0.82	-3.3
2,000,998	-	gcvP	MCAODC_10050	0.82	-0.4
2,000,998	-	gcvP	MCAODC_10050	0.82	+0.1
2,000,998	-	gcvP	MCAODC_10050	0.82	+1.1
2,000,998	-	gcvP	MCAODC_10050	0.82	+0.8
2,001,036	+	gcvP	MCAODC_10050	0.84	+1.6
2,001,036	+	gcvP	MCAODC_10050	0.84	+0.0
2,001,037	-	gcvP	MCAODC_10050	0.84	+0.6
2,001,037	-	gcvP	MCAODC_10050	0.84	+0.8
2,001,037	-	gcvP	MCAODC_10050	0.84	-1.3
2,001,037	-	gcvP	MCAODC_10050	0.84	-1.8
2,001,037	-	gcvP	MCAODC_10050	0.84	-1.2
2,001,038	+	gcvP	MCAODC_10050	0.84	-2.2
2,001,071	+	gcvP	MCAODC_10050	0.85	-1.6
2,001,071	+	gcvP	MCAODC_10050	0.85	+2.0
2,001,072	-	gcvP	MCAODC_10050	0.85	+0.5
2,001,369	+				-0.9
2,001,414	+				+0.1
2,001,414	+				+0.2
2,001,414	+				-3.0
2,001,458	+				-0.6
2,001,499	-				+0.0
2,001,522	+				-2.0
2,001,523	-				+1.0
2,001,544	+				-0.2
2,001,545	-				+0.4
2,001,555	+				+0.9
2,001,587	+				+0.1
2,001,587	+				+0.3
2,001,587	+				+1.1
2,001,587	+				+0.0
2,001,587	+				+2.8
2,001,588	-				+0.9
2,001,588	-				-0.5
2,001,588	-				-0.1
2,001,588	-				-0.3
2,001,592	+				-0.1
2,001,593	-				+0.0
2,001,593	-				+0.7
2,001,593	-				+1.6
2,001,597	+				+0.1
2,001,612	-				-2.4
2,001,613	+				-2.6
2,001,614	-				-3.0
2,001,614	-				-1.0
2,001,616	+				-0.2
2,001,617	-				-1.3
2,001,617	-				-1.6
2,001,667	+				+0.0
2,001,668	-				-0.4
2,001,668	-				+2.2
2,001,668	-				+0.3
2,001,711	-				-0.1
2,001,722	+				+1.7
2,001,722	+				+0.1
2,001,722	+				-0.5
2,001,722	+				-0.1
2,001,737	+				-2.2
2,001,737	+				-2.3
2,001,738	-				+1.5
2,001,761	+				+1.5
2,001,761	+				-1.0
2,001,769	+				-1.7
2,001,769	+				-1.9
2,001,769	+				+0.5
2,001,769	+				-1.1
2,001,769	+				-0.3
2,001,769	+				-2.4
2,001,770	-				+0.3
2,001,770	-				+0.3
2,001,770	-				-0.5
2,001,770	-				-0.5
2,001,770	-				+0.9
2,001,770	-				-0.4
2,001,773	+				+0.7
2,001,773	+				+1.3
2,001,773	+				-1.7
2,001,794	-				-0.7
2,001,841	+	bglA	MCAODC_10055	0.12	-1.0
2,001,842	-	bglA	MCAODC_10055	0.12	+1.9
2,001,865	+	bglA	MCAODC_10055	0.14	+0.7
2,001,865	+	bglA	MCAODC_10055	0.14	+2.6
2,001,865	+	bglA	MCAODC_10055	0.14	-0.7
2,001,865	+	bglA	MCAODC_10055	0.14	-0.2
2,001,865	+	bglA	MCAODC_10055	0.14	+0.4
2,001,866	-	bglA	MCAODC_10055	0.14	-1.4
2,001,870	+	bglA	MCAODC_10055	0.14	+0.1
2,001,871	-	bglA	MCAODC_10055	0.14	-0.4
2,001,908	-	bglA	MCAODC_10055	0.17	+0.3
2,001,908	-	bglA	MCAODC_10055	0.17	-0.8
2,001,919	+	bglA	MCAODC_10055	0.18	-0.3
2,001,959	-	bglA	MCAODC_10055	0.20	-1.4
2,002,001	-	bglA	MCAODC_10055	0.23	-0.1
2,002,009	+	bglA	MCAODC_10055	0.24	+1.2
2,002,009	+	bglA	MCAODC_10055	0.24	-1.6
2,002,010	-	bglA	MCAODC_10055	0.24	-2.1
2,002,010	-	bglA	MCAODC_10055	0.24	-0.3
2,002,010	-	bglA	MCAODC_10055	0.24	-1.2
2,002,010	-	bglA	MCAODC_10055	0.24	-0.3
2,002,089	+	bglA	MCAODC_10055	0.29	-0.7
2,002,156	+	bglA	MCAODC_10055	0.34	-2.1
2,002,157	-	bglA	MCAODC_10055	0.34	+1.3
2,002,157	-	bglA	MCAODC_10055	0.34	+1.3
2,002,157	-	bglA	MCAODC_10055	0.34	-0.4
2,002,157	-	bglA	MCAODC_10055	0.34	-0.7
2,002,157	-	bglA	MCAODC_10055	0.34	+2.4
2,002,159	+	bglA	MCAODC_10055	0.34	+1.0
2,002,174	+	bglA	MCAODC_10055	0.35	-0.3
2,002,175	-	bglA	MCAODC_10055	0.35	+0.6
2,002,197	+	bglA	MCAODC_10055	0.37	+0.7
2,002,197	+	bglA	MCAODC_10055	0.37	+0.5
2,002,198	-	bglA	MCAODC_10055	0.37	-2.9
2,002,211	+	bglA	MCAODC_10055	0.38	+0.8
2,002,212	-	bglA	MCAODC_10055	0.38	+1.3
2,002,212	-	bglA	MCAODC_10055	0.38	-0.8
2,002,230	-	bglA	MCAODC_10055	0.39	+0.2
2,002,230	-	bglA	MCAODC_10055	0.39	+0.4
2,002,230	-	bglA	MCAODC_10055	0.39	-0.0
2,002,261	+	bglA	MCAODC_10055	0.41	-1.5
2,002,262	-	bglA	MCAODC_10055	0.42	+0.3
2,002,262	-	bglA	MCAODC_10055	0.42	+1.2
2,002,298	-	bglA	MCAODC_10055	0.44	-2.2
2,002,357	+	bglA	MCAODC_10055	0.48	+2.0
2,002,357	+	bglA	MCAODC_10055	0.48	-2.3
2,002,358	-	bglA	MCAODC_10055	0.48	-0.3
2,002,358	-	bglA	MCAODC_10055	0.48	-0.2
2,002,363	+	bglA	MCAODC_10055	0.49	+1.1
2,002,363	+	bglA	MCAODC_10055	0.49	+1.4
2,002,364	-	bglA	MCAODC_10055	0.49	-0.3
2,002,385	+	bglA	MCAODC_10055	0.50	-0.3
2,002,385	+	bglA	MCAODC_10055	0.50	+0.6
2,002,385	+	bglA	MCAODC_10055	0.50	-0.5
2,002,385	+	bglA	MCAODC_10055	0.50	-1.5
2,002,386	-	bglA	MCAODC_10055	0.50	+0.6
2,002,472	-	bglA	MCAODC_10055	0.56	+0.8
2,002,472	-	bglA	MCAODC_10055	0.56	-0.7
2,002,472	-	bglA	MCAODC_10055	0.56	-1.9
2,002,502	+	bglA	MCAODC_10055	0.58	+0.1
2,002,504	+	bglA	MCAODC_10055	0.58	+0.2
2,002,505	-	bglA	MCAODC_10055	0.59	+0.4
2,002,505	-	bglA	MCAODC_10055	0.59	-0.9
2,002,505	-	bglA	MCAODC_10055	0.59	-0.2
2,002,505	-	bglA	MCAODC_10055	0.59	+0.6
2,002,551	-	bglA	MCAODC_10055	0.62	-0.1
2,002,563	-	bglA	MCAODC_10055	0.63	+1.6
2,002,585	+	bglA	MCAODC_10055	0.64	-1.8
2,002,585	+	bglA	MCAODC_10055	0.64	-0.4
2,002,585	+	bglA	MCAODC_10055	0.64	-0.0
2,002,603	+	bglA	MCAODC_10055	0.65	-0.7
2,002,735	+	bglA	MCAODC_10055	0.75	+1.2
2,002,736	-	bglA	MCAODC_10055	0.75	-0.5
2,002,766	-	bglA	MCAODC_10055	0.77	+0.9
2,002,766	-	bglA	MCAODC_10055	0.77	+0.4
2,002,869	+	bglA	MCAODC_10055	0.84	+1.1
2,002,869	+	bglA	MCAODC_10055	0.84	+0.2
2,002,869	+	bglA	MCAODC_10055	0.84	+1.8
2,002,887	-	bglA	MCAODC_10055	0.85	+0.1
2,002,888	+	bglA	MCAODC_10055	0.85	+0.3
2,002,888	+	bglA	MCAODC_10055	0.85	-0.3
2,002,889	-	bglA	MCAODC_10055	0.85	+0.6
2,002,889	-	bglA	MCAODC_10055	0.85	-0.3
2,002,889	-	bglA	MCAODC_10055	0.85	+0.5
2,002,897	+	bglA	MCAODC_10055	0.86	+1.3
2,002,898	-	bglA	MCAODC_10055	0.86	-2.7
2,002,927	+	bglA	MCAODC_10055	0.88	-0.5
2,002,927	+	bglA	MCAODC_10055	0.88	-0.2
2,002,927	+	bglA	MCAODC_10055	0.88	+1.9
2,002,927	+	bglA	MCAODC_10055	0.88	-3.0
2,002,928	-	bglA	MCAODC_10055	0.88	+1.0
2,002,928	-	bglA	MCAODC_10055	0.88	+0.5
2,003,100	+				+1.0
2,003,105	+				-0.3
2,003,105	+				-1.1
2,003,105	+				-0.0
2,003,105	+				+1.0
2,003,105	+				+0.7
2,003,105	+				-1.3
2,003,106	-				+0.6
2,003,137	+				+0.7
2,003,137	+				-1.4
2,003,138	-				-3.5
2,003,138	-				-0.4
2,003,138	-				-0.6
2,003,138	-				+1.1
2,003,369	-	yqfB	MCAODC_10060	0.72	-0.4
2,003,369	-	yqfB	MCAODC_10060	0.72	-0.3
2,003,369	-	yqfB	MCAODC_10060	0.72	-0.9
2,003,408	+	yqfB	MCAODC_10060	0.85	+1.3
2,003,408	+	yqfB	MCAODC_10060	0.85	+0.2
2,003,409	-	yqfB	MCAODC_10060	0.85	-1.8
2,003,474	-				-0.3
2,003,542	-				-2.7
2,003,571	+				-1.0
2,003,571	+				+1.8
2,003,584	+				+1.1
2,003,584	+				-1.5
2,003,584	+				+0.3
2,003,585	-				-1.4
2,003,585	-				-0.0
2,003,585	-				+1.2
2,003,586	+				-1.1
2,003,586	+				-0.2
2,003,586	+				+0.8
2,003,586	+				-0.7
2,003,586	+				+0.0
2,003,586	+				-1.0
2,003,586	+				+0.5
2,003,587	-				-1.6
2,003,587	-				-0.7
2,003,587	-				+0.9
2,003,587	-				+2.7
2,003,587	-				-1.2
2,003,587	-				+0.3
2,003,598	+				+0.4
2,003,613	+				-1.0
2,003,613	+				+0.8
2,003,613	+				+0.5
2,003,614	-				-0.4
2,003,614	-				-0.2
2,003,614	-				-1.2
2,003,618	+				+0.7
2,003,618	+				-0.3
2,003,618	+				+0.9
2,003,619	-				+0.3
2,003,619	-				-1.7
2,003,779	-	yqfA	MCAODC_10065	0.24	-0.4
2,003,779	-	yqfA	MCAODC_10065	0.24	-0.2
2,003,779	-	yqfA	MCAODC_10065	0.24	+1.5
2,003,779	-	yqfA	MCAODC_10065	0.24	-0.4
2,003,779	-	yqfA	MCAODC_10065	0.24	+0.5
2,003,787	+	yqfA	MCAODC_10065	0.25	+0.7
2,003,787	+	yqfA	MCAODC_10065	0.25	-2.5
2,003,798	+	yqfA	MCAODC_10065	0.27	+1.4
2,003,799	-	yqfA	MCAODC_10065	0.27	-0.9
2,003,830	-	yqfA	MCAODC_10065	0.32	+2.9
2,003,892	+	yqfA	MCAODC_10065	0.41	+0.8
2,003,892	+	yqfA	MCAODC_10065	0.41	+0.4
2,003,893	-	yqfA	MCAODC_10065	0.42	-2.7
2,003,893	-	yqfA	MCAODC_10065	0.42	-0.7
2,003,914	-	yqfA	MCAODC_10065	0.45	+0.1
2,003,914	-	yqfA	MCAODC_10065	0.45	+3.2
2,003,973	-	yqfA	MCAODC_10065	0.54	+2.2
2,004,051	+	yqfA	MCAODC_10065	0.65	-0.9
2,004,051	+	yqfA	MCAODC_10065	0.65	-1.2
2,004,051	+	yqfA	MCAODC_10065	0.65	+0.5
2,004,087	+	yqfA	MCAODC_10065	0.71	-1.3
2,004,087	+	yqfA	MCAODC_10065	0.71	-0.3