Strain Fitness in Escherichia coli ECRC101 around MCAODC_08820

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,760,836	-	agaS	MCAODC_08815	0.54	+0.2
1,760,836	-	agaS	MCAODC_08815	0.54	-0.0
1,760,963	+	agaS	MCAODC_08815	0.65	+0.7
1,760,964	-	agaS	MCAODC_08815	0.65	+1.2
1,760,964	-	agaS	MCAODC_08815	0.65	+1.3
1,761,072	-	agaS	MCAODC_08815	0.75	-0.6
1,761,084	+	agaS	MCAODC_08815	0.76	-2.8
1,761,165	+	agaS	MCAODC_08815	0.83	-0.0
1,761,237	+	agaS	MCAODC_08815	0.89	-1.6
1,761,238	-	agaS	MCAODC_08815	0.89	-0.5
1,761,238	-	agaS	MCAODC_08815	0.89	+1.0
1,761,240	+	agaS	MCAODC_08815	0.89	+0.8
1,761,240	+	agaS	MCAODC_08815	0.89	-2.3
1,761,241	-	agaS	MCAODC_08815	0.89	-0.5
1,761,253	+				+0.6
1,761,254	-				+0.2
1,761,364	-				+2.5
1,761,603	+				-1.2
1,761,603	+				-1.6
1,761,603	+				-0.7
1,761,603	+				+0.3
1,761,603	+				+0.2
1,761,603	+				+0.1
1,761,603	+				-0.2
1,761,603	+				+0.4
1,761,603	+				+1.9
1,761,604	-				+0.7
1,761,604	-				+0.3
1,761,604	-				-2.1
1,761,604	-				+0.2
1,761,604	-				-0.4
1,761,604	-				-0.7
1,761,604	-				-2.7
1,761,604	-				-0.4
1,761,604	-				-2.2
1,761,604	-				+1.6
1,761,613	-				+1.0
1,761,727	-				+1.1
1,761,727	-				-0.5
1,761,861	-	nagA	MCAODC_08820	0.13	-1.0
1,761,861	-	nagA	MCAODC_08820	0.13	+1.5
1,761,999	+	nagA	MCAODC_08820	0.25	-3.1
1,761,999	+	nagA	MCAODC_08820	0.25	+0.5
1,761,999	+	nagA	MCAODC_08820	0.25	+0.1
1,762,000	-	nagA	MCAODC_08820	0.25	+0.8
1,762,000	-	nagA	MCAODC_08820	0.25	-1.0
1,762,004	+	nagA	MCAODC_08820	0.26	-0.7
1,762,004	+	nagA	MCAODC_08820	0.26	-0.9
1,762,004	+	nagA	MCAODC_08820	0.26	-3.0
1,762,004	+	nagA	MCAODC_08820	0.26	-3.0
1,762,004	+	nagA	MCAODC_08820	0.26	-1.9
1,762,004	+	nagA	MCAODC_08820	0.26	+0.1
1,762,004	+	nagA	MCAODC_08820	0.26	-2.3
1,762,005	-	nagA	MCAODC_08820	0.26	+1.0
1,762,005	-	nagA	MCAODC_08820	0.26	+2.0
1,762,005	-	nagA	MCAODC_08820	0.26	-0.6
1,762,005	-	nagA	MCAODC_08820	0.26	-3.3
1,762,005	-	nagA	MCAODC_08820	0.26	+0.1
1,762,053	+	nagA	MCAODC_08820	0.30	-0.7
1,762,054	-	nagA	MCAODC_08820	0.30	-0.1
1,762,054	-	nagA	MCAODC_08820	0.30	-0.6
1,762,188	+	nagA	MCAODC_08820	0.42	+0.8
1,762,188	+	nagA	MCAODC_08820	0.42	-0.9
1,762,207	+	nagA	MCAODC_08820	0.43	+1.5
1,762,207	+	nagA	MCAODC_08820	0.43	-0.3
1,762,208	-	nagA	MCAODC_08820	0.44	-1.3
1,762,208	-	nagA	MCAODC_08820	0.44	-2.0
1,762,208	-	nagA	MCAODC_08820	0.44	+1.2
1,762,208	-	nagA	MCAODC_08820	0.44	-0.2
1,762,208	-	nagA	MCAODC_08820	0.44	-0.2
1,762,275	-	nagA	MCAODC_08820	0.49	+0.5
1,762,308	-	nagA	MCAODC_08820	0.52	-1.0
1,762,308	-	nagA	MCAODC_08820	0.52	-1.4
1,762,308	-	nagA	MCAODC_08820	0.52	-0.0
1,762,365	+	nagA	MCAODC_08820	0.57	-1.4
1,762,365	+	nagA	MCAODC_08820	0.57	+0.9
1,762,366	-	nagA	MCAODC_08820	0.57	-0.2
1,762,465	+	nagA	MCAODC_08820	0.66	-0.3
1,762,480	+	nagA	MCAODC_08820	0.68	+1.0
1,762,480	+	nagA	MCAODC_08820	0.68	-1.3
1,762,480	+	nagA	MCAODC_08820	0.68	-0.1
1,762,532	+	nagA	MCAODC_08820	0.72	-1.0
1,762,556	+	nagA	MCAODC_08820	0.74	-1.0
1,762,556	+	nagA	MCAODC_08820	0.74	-0.4
1,762,557	-	nagA	MCAODC_08820	0.74	-0.4
1,762,557	-	nagA	MCAODC_08820	0.74	-2.4
1,762,559	+	nagA	MCAODC_08820	0.75	+0.1
1,762,560	-	nagA	MCAODC_08820	0.75	-3.0
1,762,560	-	nagA	MCAODC_08820	0.75	+1.2
1,762,636	-	nagA	MCAODC_08820	0.81	+1.0
1,762,636	-	nagA	MCAODC_08820	0.81	-1.0
1,762,656	+	nagA	MCAODC_08820	0.83	+1.0
1,762,656	+	nagA	MCAODC_08820	0.83	+0.4
1,762,680	+	nagA	MCAODC_08820	0.85	-0.1
1,762,680	+	nagA	MCAODC_08820	0.85	+0.4
1,762,680	+	nagA	MCAODC_08820	0.85	+0.4
1,762,680	+	nagA	MCAODC_08820	0.85	-0.8
1,762,681	-	nagA	MCAODC_08820	0.85	-0.3
1,762,697	-	nagA	MCAODC_08820	0.87	+1.1
1,762,697	-	nagA	MCAODC_08820	0.87	+1.1
1,762,778	+				+1.5
1,762,988	+	agaF	MCAODC_08825	0.33	-0.5
1,762,988	+	agaF	MCAODC_08825	0.33	-1.1
1,762,989	-	agaF	MCAODC_08825	0.33	-3.3
1,763,146	+	agaF	MCAODC_08825	0.69	+1.4
1,763,146	+	agaF	MCAODC_08825	0.69	+0.6
1,763,146	+	agaF	MCAODC_08825	0.69	+2.0
1,763,146	+	agaF	MCAODC_08825	0.69	-1.0
1,763,146	+	agaF	MCAODC_08825	0.69	+0.8
1,763,147	-	agaF	MCAODC_08825	0.70	+0.1
1,763,147	-	agaF	MCAODC_08825	0.70	-0.3
1,763,147	-	agaF	MCAODC_08825	0.70	-0.4
1,763,147	-	agaF	MCAODC_08825	0.70	-0.9
1,763,147	-	agaF	MCAODC_08825	0.70	+2.1
1,763,269	+				-2.8
1,763,270	-				-1.0
1,763,273	+				+0.6
1,763,274	-				+1.5
1,763,293	+				+0.8
1,763,340	+				-1.2
1,763,341	-				-0.3
1,763,377	+				+0.4
1,763,378	-				-0.1
1,763,403	-	agaE	MCAODC_08830	0.12	-0.3
1,763,457	+	agaE	MCAODC_08830	0.18	-2.9
1,763,457	+	agaE	MCAODC_08830	0.18	-0.2
1,763,497	+	agaE	MCAODC_08830	0.23	+0.3
1,763,497	+	agaE	MCAODC_08830	0.23	-3.2
1,763,497	+	agaE	MCAODC_08830	0.23	-0.9
1,763,498	-	agaE	MCAODC_08830	0.23	-0.3
1,763,507	+	agaE	MCAODC_08830	0.24	+1.0
1,763,507	+	agaE	MCAODC_08830	0.24	+0.6
1,763,507	+	agaE	MCAODC_08830	0.24	-0.6
1,763,507	+	agaE	MCAODC_08830	0.24	+0.1
1,763,507	+	agaE	MCAODC_08830	0.24	+0.9
1,763,508	-	agaE	MCAODC_08830	0.24	+1.2
1,763,508	-	agaE	MCAODC_08830	0.24	-0.5
1,763,508	-	agaE	MCAODC_08830	0.24	-2.3
1,763,508	-	agaE	MCAODC_08830	0.24	-0.1
1,763,508	-	agaE	MCAODC_08830	0.24	-0.7
1,763,508	-	agaE	MCAODC_08830	0.24	-1.8
1,763,508	-	agaE	MCAODC_08830	0.24	-1.8
1,763,508	-	agaE	MCAODC_08830	0.24	-0.0
1,763,574	+	agaE	MCAODC_08830	0.32	-0.8
1,763,577	+	agaE	MCAODC_08830	0.32	+0.2
1,763,577	+	agaE	MCAODC_08830	0.32	-1.3
1,763,578	-	agaE	MCAODC_08830	0.32	+0.1
1,763,615	+	agaE	MCAODC_08830	0.36	+0.1
1,763,621	+	agaE	MCAODC_08830	0.37	-0.8
1,763,621	+	agaE	MCAODC_08830	0.37	-2.1
1,763,622	-	agaE	MCAODC_08830	0.37	+0.3
1,763,674	-	agaE	MCAODC_08830	0.43	+0.5
1,763,743	+	agaE	MCAODC_08830	0.51	-0.2
1,763,832	+	agaE	MCAODC_08830	0.61	+1.0
1,763,833	-	agaE	MCAODC_08830	0.61	-0.2