Strain Fitness in Escherichia coli ECRC101 around MCAODC_07125

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMCAODC_07120 and fabA overlap by 10 nucleotidesfabA and MCAODC_07130 overlap by 14 nucleotidesMCAODC_07130 and MCAODC_07135 are separated by 54 nucleotides MCAODC_07120: MCAODC_07120 - acyltransferase, at 1,446,111 to 1,447,787 _07120 MCAODC_07125: fabA - hydroxymyristoyl-ACP dehydratase, at 1,447,778 to 1,448,131 fabA MCAODC_07130: MCAODC_07130 - hypothetical protein, at 1,448,118 to 1,448,519 _07130 MCAODC_07135: MCAODC_07135 - AMP-binding enzyme, at 1,448,574 to 1,449,479 _07135 Position (kb) 1447 1448 1449Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1446.819 kb on + strand, within MCAODC_07120at 1446.820 kb on - strand, within MCAODC_07120at 1446.832 kb on + strand, within MCAODC_07120at 1446.832 kb on + strand, within MCAODC_07120at 1446.833 kb on - strand, within MCAODC_07120at 1446.833 kb on - strand, within MCAODC_07120at 1446.833 kb on - strand, within MCAODC_07120at 1446.871 kb on - strand, within MCAODC_07120at 1446.943 kb on + strand, within MCAODC_07120at 1447.171 kb on + strand, within MCAODC_07120at 1447.171 kb on + strand, within MCAODC_07120at 1447.172 kb on - strand, within MCAODC_07120at 1447.195 kb on + strand, within MCAODC_07120at 1447.195 kb on + strand, within MCAODC_07120at 1447.195 kb on + strand, within MCAODC_07120at 1447.196 kb on - strand, within MCAODC_07120at 1447.196 kb on - strand, within MCAODC_07120at 1447.202 kb on + strand, within MCAODC_07120at 1447.203 kb on - strand, within MCAODC_07120at 1447.217 kb on - strand, within MCAODC_07120at 1447.388 kb on - strand, within MCAODC_07120at 1447.388 kb on - strand, within MCAODC_07120at 1447.417 kb on + strand, within MCAODC_07120at 1447.418 kb on - strand, within MCAODC_07120at 1447.418 kb on - strand, within MCAODC_07120at 1447.482 kb on - strand, within MCAODC_07120at 1447.482 kb on - strand, within MCAODC_07120at 1447.555 kb on - strand, within MCAODC_07120at 1447.605 kb on + strand, within MCAODC_07120at 1447.685 kb on + strandat 1447.685 kb on + strandat 1447.685 kb on + strandat 1447.686 kb on - strandat 1447.686 kb on - strandat 1447.686 kb on - strandat 1447.697 kb on + strandat 1447.697 kb on + strandat 1447.697 kb on + strandat 1447.706 kb on + strandat 1447.707 kb on - strandat 1447.707 kb on - strandat 1447.707 kb on - strandat 1447.707 kb on - strandat 1447.755 kb on + strandat 1447.787 kb on + strandat 1447.788 kb on - strandat 1447.846 kb on + strand, within fabAat 1447.846 kb on + strand, within fabAat 1447.846 kb on + strand, within fabAat 1447.846 kb on + strand, within fabAat 1447.847 kb on - strand, within fabAat 1447.847 kb on - strand, within fabAat 1447.847 kb on - strand, within fabAat 1447.879 kb on + strand, within fabAat 1447.879 kb on + strand, within fabAat 1447.880 kb on - strand, within fabAat 1447.929 kb on - strand, within fabAat 1447.980 kb on + strand, within fabAat 1447.980 kb on + strand, within fabAat 1447.981 kb on - strand, within fabAat 1447.981 kb on - strand, within fabAat 1448.019 kb on - strand, within fabAat 1448.137 kb on - strandat 1448.145 kb on + strandat 1448.145 kb on + strandat 1448.146 kb on - strandat 1448.146 kb on - strandat 1448.146 kb on - strandat 1448.146 kb on - strandat 1448.156 kb on - strandat 1448.156 kb on - strandat 1448.171 kb on + strand, within MCAODC_07130at 1448.171 kb on + strand, within MCAODC_07130at 1448.172 kb on - strand, within MCAODC_07130at 1448.179 kb on - strand, within MCAODC_07130at 1448.216 kb on + strand, within MCAODC_07130at 1448.216 kb on + strand, within MCAODC_07130at 1448.244 kb on + strand, within MCAODC_07130at 1448.245 kb on - strand, within MCAODC_07130at 1448.245 kb on - strand, within MCAODC_07130at 1448.270 kb on + strand, within MCAODC_07130at 1448.271 kb on - strand, within MCAODC_07130at 1448.331 kb on + strand, within MCAODC_07130at 1448.331 kb on + strand, within MCAODC_07130at 1448.331 kb on + strand, within MCAODC_07130at 1448.409 kb on + strand, within MCAODC_07130at 1448.409 kb on + strand, within MCAODC_07130at 1448.409 kb on + strand, within MCAODC_07130at 1448.410 kb on - strand, within MCAODC_07130at 1448.410 kb on - strand, within MCAODC_07130at 1448.445 kb on - strand, within MCAODC_07130at 1448.445 kb on - strand, within MCAODC_07130at 1448.663 kb on - strandat 1448.706 kb on + strand, within MCAODC_07135at 1448.706 kb on + strand, within MCAODC_07135at 1448.706 kb on + strand, within MCAODC_07135at 1448.706 kb on + strand, within MCAODC_07135at 1448.706 kb on + strand, within MCAODC_07135at 1448.707 kb on - strand, within MCAODC_07135at 1448.707 kb on - strand, within MCAODC_07135at 1448.707 kb on - strand, within MCAODC_07135at 1448.707 kb on - strand, within MCAODC_07135at 1448.707 kb on - strand, within MCAODC_07135at 1448.814 kb on - strand, within MCAODC_07135at 1448.814 kb on - strand, within MCAODC_07135at 1448.814 kb on - strand, within MCAODC_07135at 1448.815 kb on + strand, within MCAODC_07135at 1448.815 kb on + strand, within MCAODC_07135at 1448.815 kb on + strand, within MCAODC_07135at 1448.815 kb on + strand, within MCAODC_07135at 1448.815 kb on + strand, within MCAODC_07135at 1448.816 kb on - strand, within MCAODC_07135at 1448.816 kb on - strand, within MCAODC_07135at 1448.816 kb on - strand, within MCAODC_07135at 1448.816 kb on - strand, within MCAODC_07135at 1448.854 kb on + strand, within MCAODC_07135at 1448.854 kb on + strand, within MCAODC_07135at 1448.854 kb on + strand, within MCAODC_07135at 1448.880 kb on + strand, within MCAODC_07135at 1448.881 kb on - strand, within MCAODC_07135at 1449.029 kb on + strand, within MCAODC_07135at 1449.029 kb on + strand, within MCAODC_07135at 1449.078 kb on - strand, within MCAODC_07135

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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1,446,819 + MCAODC_07120 0.42 -0.3
1,446,820 - MCAODC_07120 0.42 +1.1
1,446,832 + MCAODC_07120 0.43 +0.9
1,446,832 + MCAODC_07120 0.43 -1.0
1,446,833 - MCAODC_07120 0.43 +0.6
1,446,833 - MCAODC_07120 0.43 +0.1
1,446,833 - MCAODC_07120 0.43 -1.3
1,446,871 - MCAODC_07120 0.45 +1.6
1,446,943 + MCAODC_07120 0.50 +0.9
1,447,171 + MCAODC_07120 0.63 +0.9
1,447,171 + MCAODC_07120 0.63 -0.6
1,447,172 - MCAODC_07120 0.63 +0.8
1,447,195 + MCAODC_07120 0.65 -3.9
1,447,195 + MCAODC_07120 0.65 -0.2
1,447,195 + MCAODC_07120 0.65 +1.9
1,447,196 - MCAODC_07120 0.65 -0.8
1,447,196 - MCAODC_07120 0.65 +0.2
1,447,202 + MCAODC_07120 0.65 +0.4
1,447,203 - MCAODC_07120 0.65 +0.2
1,447,217 - MCAODC_07120 0.66 +0.8
1,447,388 - MCAODC_07120 0.76 -0.6
1,447,388 - MCAODC_07120 0.76 +1.5
1,447,417 + MCAODC_07120 0.78 +0.8
1,447,418 - MCAODC_07120 0.78 +0.3
1,447,418 - MCAODC_07120 0.78 -3.2
1,447,482 - MCAODC_07120 0.82 -0.3
1,447,482 - MCAODC_07120 0.82 +0.6
1,447,555 - MCAODC_07120 0.86 +0.2
1,447,605 + MCAODC_07120 0.89 +0.4
1,447,685 + +0.6
1,447,685 + +0.8
1,447,685 + +0.3
1,447,686 - +0.6
1,447,686 - -0.7
1,447,686 - -0.7
1,447,697 + +0.8
1,447,697 + +1.0
1,447,697 + -2.7
1,447,706 + +0.8
1,447,707 - +0.7
1,447,707 - +0.2
1,447,707 - +0.2
1,447,707 - +0.8
1,447,755 + -0.6
1,447,787 + +0.9
1,447,788 - +0.8
1,447,846 + fabA MCAODC_07125 0.19 +0.6
1,447,846 + fabA MCAODC_07125 0.19 -0.8
1,447,846 + fabA MCAODC_07125 0.19 -1.8
1,447,846 + fabA MCAODC_07125 0.19 +0.1
1,447,847 - fabA MCAODC_07125 0.19 -0.3
1,447,847 - fabA MCAODC_07125 0.19 +0.7
1,447,847 - fabA MCAODC_07125 0.19 -0.0
1,447,879 + fabA MCAODC_07125 0.29 +0.4
1,447,879 + fabA MCAODC_07125 0.29 +1.0
1,447,880 - fabA MCAODC_07125 0.29 -4.1
1,447,929 - fabA MCAODC_07125 0.43 +0.0
1,447,980 + fabA MCAODC_07125 0.57 -0.1
1,447,980 + fabA MCAODC_07125 0.57 -0.1
1,447,981 - fabA MCAODC_07125 0.57 -1.5
1,447,981 - fabA MCAODC_07125 0.57 -0.8
1,448,019 - fabA MCAODC_07125 0.68 -0.1
1,448,137 - -3.4
1,448,145 + -1.7
1,448,145 + +0.0
1,448,146 - +1.1
1,448,146 - -3.3
1,448,146 - -0.3
1,448,146 - -0.1
1,448,156 - -1.1
1,448,156 - +1.7
1,448,171 + MCAODC_07130 0.13 +0.2
1,448,171 + MCAODC_07130 0.13 +0.3
1,448,172 - MCAODC_07130 0.13 -0.8
1,448,179 - MCAODC_07130 0.15 -0.3
1,448,216 + MCAODC_07130 0.24 -3.2
1,448,216 + MCAODC_07130 0.24 -1.7
1,448,244 + MCAODC_07130 0.31 -2.3
1,448,245 - MCAODC_07130 0.32 -0.1
1,448,245 - MCAODC_07130 0.32 -0.6
1,448,270 + MCAODC_07130 0.38 -2.2
1,448,271 - MCAODC_07130 0.38 +0.1
1,448,331 + MCAODC_07130 0.53 -2.6
1,448,331 + MCAODC_07130 0.53 -0.6
1,448,331 + MCAODC_07130 0.53 -1.0
1,448,409 + MCAODC_07130 0.72 +0.0
1,448,409 + MCAODC_07130 0.72 +0.9
1,448,409 + MCAODC_07130 0.72 +0.9
1,448,410 - MCAODC_07130 0.73 +0.0
1,448,410 - MCAODC_07130 0.73 +0.5
1,448,445 - MCAODC_07130 0.81 +0.3
1,448,445 - MCAODC_07130 0.81 -0.9
1,448,663 - +1.2
1,448,706 + MCAODC_07135 0.15 -0.3
1,448,706 + MCAODC_07135 0.15 -0.2
1,448,706 + MCAODC_07135 0.15 -1.2
1,448,706 + MCAODC_07135 0.15 -1.6
1,448,706 + MCAODC_07135 0.15 -1.3
1,448,707 - MCAODC_07135 0.15 +1.4
1,448,707 - MCAODC_07135 0.15 -0.7
1,448,707 - MCAODC_07135 0.15 +1.0
1,448,707 - MCAODC_07135 0.15 +0.1
1,448,707 - MCAODC_07135 0.15 +0.3
1,448,814 - MCAODC_07135 0.26 -0.0
1,448,814 - MCAODC_07135 0.26 -0.3
1,448,814 - MCAODC_07135 0.26 -1.1
1,448,815 + MCAODC_07135 0.27 -0.6
1,448,815 + MCAODC_07135 0.27 -0.0
1,448,815 + MCAODC_07135 0.27 +1.6
1,448,815 + MCAODC_07135 0.27 -0.1
1,448,815 + MCAODC_07135 0.27 +0.7
1,448,816 - MCAODC_07135 0.27 -0.0
1,448,816 - MCAODC_07135 0.27 +1.1
1,448,816 - MCAODC_07135 0.27 -3.2
1,448,816 - MCAODC_07135 0.27 +0.8
1,448,854 + MCAODC_07135 0.31 +0.1
1,448,854 + MCAODC_07135 0.31 +1.5
1,448,854 + MCAODC_07135 0.31 -0.5
1,448,880 + MCAODC_07135 0.34 -1.0
1,448,881 - MCAODC_07135 0.34 -0.6
1,449,029 + MCAODC_07135 0.50 +1.7
1,449,029 + MCAODC_07135 0.50 +0.8
1,449,078 - MCAODC_07135 0.56 +0.8

Or see this region's nucleotide sequence