Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MCAODC_07120 and fabA overlap by 10 nucleotides fabA and MCAODC_07130 overlap by 14 nucleotides MCAODC_07130 and MCAODC_07135 are separated by 54 nucleotides
MCAODC_07120: MCAODC_07120 - acyltransferase, at 1,446,111 to 1,447,787
_07120
MCAODC_07125: fabA - hydroxymyristoyl-ACP dehydratase, at 1,447,778 to 1,448,131
fabA
MCAODC_07130: MCAODC_07130 - hypothetical protein, at 1,448,118 to 1,448,519
_07130
MCAODC_07135: MCAODC_07135 - AMP-binding enzyme, at 1,448,574 to 1,449,479
_07135
Position (kb)
1447
1448
1449 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1446.819 kb on + strand, within MCAODC_07120 at 1446.820 kb on - strand, within MCAODC_07120 at 1446.832 kb on + strand, within MCAODC_07120 at 1446.832 kb on + strand, within MCAODC_07120 at 1446.833 kb on - strand, within MCAODC_07120 at 1446.833 kb on - strand, within MCAODC_07120 at 1446.833 kb on - strand, within MCAODC_07120 at 1446.871 kb on - strand, within MCAODC_07120 at 1446.943 kb on + strand, within MCAODC_07120 at 1447.171 kb on + strand, within MCAODC_07120 at 1447.171 kb on + strand, within MCAODC_07120 at 1447.172 kb on - strand, within MCAODC_07120 at 1447.195 kb on + strand, within MCAODC_07120 at 1447.195 kb on + strand, within MCAODC_07120 at 1447.195 kb on + strand, within MCAODC_07120 at 1447.196 kb on - strand, within MCAODC_07120 at 1447.196 kb on - strand, within MCAODC_07120 at 1447.202 kb on + strand, within MCAODC_07120 at 1447.203 kb on - strand, within MCAODC_07120 at 1447.217 kb on - strand, within MCAODC_07120 at 1447.388 kb on - strand, within MCAODC_07120 at 1447.388 kb on - strand, within MCAODC_07120 at 1447.417 kb on + strand, within MCAODC_07120 at 1447.418 kb on - strand, within MCAODC_07120 at 1447.418 kb on - strand, within MCAODC_07120 at 1447.482 kb on - strand, within MCAODC_07120 at 1447.482 kb on - strand, within MCAODC_07120 at 1447.555 kb on - strand, within MCAODC_07120 at 1447.605 kb on + strand, within MCAODC_07120 at 1447.685 kb on + strand at 1447.685 kb on + strand at 1447.685 kb on + strand at 1447.686 kb on - strand at 1447.686 kb on - strand at 1447.686 kb on - strand at 1447.697 kb on + strand at 1447.697 kb on + strand at 1447.697 kb on + strand at 1447.706 kb on + strand at 1447.707 kb on - strand at 1447.707 kb on - strand at 1447.707 kb on - strand at 1447.707 kb on - strand at 1447.755 kb on + strand at 1447.787 kb on + strand at 1447.788 kb on - strand at 1447.846 kb on + strand, within fabA at 1447.846 kb on + strand, within fabA at 1447.846 kb on + strand, within fabA at 1447.846 kb on + strand, within fabA at 1447.847 kb on - strand, within fabA at 1447.847 kb on - strand, within fabA at 1447.847 kb on - strand, within fabA at 1447.879 kb on + strand, within fabA at 1447.879 kb on + strand, within fabA at 1447.880 kb on - strand, within fabA at 1447.929 kb on - strand, within fabA at 1447.980 kb on + strand, within fabA at 1447.980 kb on + strand, within fabA at 1447.981 kb on - strand, within fabA at 1447.981 kb on - strand, within fabA at 1448.019 kb on - strand, within fabA at 1448.137 kb on - strand at 1448.145 kb on + strand at 1448.145 kb on + strand at 1448.146 kb on - strand at 1448.146 kb on - strand at 1448.146 kb on - strand at 1448.146 kb on - strand at 1448.156 kb on - strand at 1448.156 kb on - strand at 1448.171 kb on + strand, within MCAODC_07130 at 1448.171 kb on + strand, within MCAODC_07130 at 1448.172 kb on - strand, within MCAODC_07130 at 1448.179 kb on - strand, within MCAODC_07130 at 1448.216 kb on + strand, within MCAODC_07130 at 1448.216 kb on + strand, within MCAODC_07130 at 1448.244 kb on + strand, within MCAODC_07130 at 1448.245 kb on - strand, within MCAODC_07130 at 1448.245 kb on - strand, within MCAODC_07130 at 1448.270 kb on + strand, within MCAODC_07130 at 1448.271 kb on - strand, within MCAODC_07130 at 1448.331 kb on + strand, within MCAODC_07130 at 1448.331 kb on + strand, within MCAODC_07130 at 1448.331 kb on + strand, within MCAODC_07130 at 1448.409 kb on + strand, within MCAODC_07130 at 1448.409 kb on + strand, within MCAODC_07130 at 1448.409 kb on + strand, within MCAODC_07130 at 1448.410 kb on - strand, within MCAODC_07130 at 1448.410 kb on - strand, within MCAODC_07130 at 1448.445 kb on - strand, within MCAODC_07130 at 1448.445 kb on - strand, within MCAODC_07130 at 1448.663 kb on - strand at 1448.706 kb on + strand, within MCAODC_07135 at 1448.706 kb on + strand, within MCAODC_07135 at 1448.706 kb on + strand, within MCAODC_07135 at 1448.706 kb on + strand, within MCAODC_07135 at 1448.706 kb on + strand, within MCAODC_07135 at 1448.707 kb on - strand, within MCAODC_07135 at 1448.707 kb on - strand, within MCAODC_07135 at 1448.707 kb on - strand, within MCAODC_07135 at 1448.707 kb on - strand, within MCAODC_07135 at 1448.707 kb on - strand, within MCAODC_07135 at 1448.814 kb on - strand, within MCAODC_07135 at 1448.814 kb on - strand, within MCAODC_07135 at 1448.814 kb on - strand, within MCAODC_07135 at 1448.815 kb on + strand, within MCAODC_07135 at 1448.815 kb on + strand, within MCAODC_07135 at 1448.815 kb on + strand, within MCAODC_07135 at 1448.815 kb on + strand, within MCAODC_07135 at 1448.815 kb on + strand, within MCAODC_07135 at 1448.816 kb on - strand, within MCAODC_07135 at 1448.816 kb on - strand, within MCAODC_07135 at 1448.816 kb on - strand, within MCAODC_07135 at 1448.816 kb on - strand, within MCAODC_07135 at 1448.854 kb on + strand, within MCAODC_07135 at 1448.854 kb on + strand, within MCAODC_07135 at 1448.854 kb on + strand, within MCAODC_07135 at 1448.880 kb on + strand, within MCAODC_07135 at 1448.881 kb on - strand, within MCAODC_07135 at 1449.029 kb on + strand, within MCAODC_07135 at 1449.029 kb on + strand, within MCAODC_07135 at 1449.078 kb on - strand, within MCAODC_07135
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,446,819 + MCAODC_07120 0.42 -0.3 1,446,820 - MCAODC_07120 0.42 +1.1 1,446,832 + MCAODC_07120 0.43 +0.9 1,446,832 + MCAODC_07120 0.43 -1.0 1,446,833 - MCAODC_07120 0.43 +0.6 1,446,833 - MCAODC_07120 0.43 +0.1 1,446,833 - MCAODC_07120 0.43 -1.3 1,446,871 - MCAODC_07120 0.45 +1.6 1,446,943 + MCAODC_07120 0.50 +0.9 1,447,171 + MCAODC_07120 0.63 +0.9 1,447,171 + MCAODC_07120 0.63 -0.6 1,447,172 - MCAODC_07120 0.63 +0.8 1,447,195 + MCAODC_07120 0.65 -3.9 1,447,195 + MCAODC_07120 0.65 -0.2 1,447,195 + MCAODC_07120 0.65 +1.9 1,447,196 - MCAODC_07120 0.65 -0.8 1,447,196 - MCAODC_07120 0.65 +0.2 1,447,202 + MCAODC_07120 0.65 +0.4 1,447,203 - MCAODC_07120 0.65 +0.2 1,447,217 - MCAODC_07120 0.66 +0.8 1,447,388 - MCAODC_07120 0.76 -0.6 1,447,388 - MCAODC_07120 0.76 +1.5 1,447,417 + MCAODC_07120 0.78 +0.8 1,447,418 - MCAODC_07120 0.78 +0.3 1,447,418 - MCAODC_07120 0.78 -3.2 1,447,482 - MCAODC_07120 0.82 -0.3 1,447,482 - MCAODC_07120 0.82 +0.6 1,447,555 - MCAODC_07120 0.86 +0.2 1,447,605 + MCAODC_07120 0.89 +0.4 1,447,685 + +0.6 1,447,685 + +0.8 1,447,685 + +0.3 1,447,686 - +0.6 1,447,686 - -0.7 1,447,686 - -0.7 1,447,697 + +0.8 1,447,697 + +1.0 1,447,697 + -2.7 1,447,706 + +0.8 1,447,707 - +0.7 1,447,707 - +0.2 1,447,707 - +0.2 1,447,707 - +0.8 1,447,755 + -0.6 1,447,787 + +0.9 1,447,788 - +0.8 1,447,846 + fabA MCAODC_07125 0.19 +0.6 1,447,846 + fabA MCAODC_07125 0.19 -0.8 1,447,846 + fabA MCAODC_07125 0.19 -1.8 1,447,846 + fabA MCAODC_07125 0.19 +0.1 1,447,847 - fabA MCAODC_07125 0.19 -0.3 1,447,847 - fabA MCAODC_07125 0.19 +0.7 1,447,847 - fabA MCAODC_07125 0.19 -0.0 1,447,879 + fabA MCAODC_07125 0.29 +0.4 1,447,879 + fabA MCAODC_07125 0.29 +1.0 1,447,880 - fabA MCAODC_07125 0.29 -4.1 1,447,929 - fabA MCAODC_07125 0.43 +0.0 1,447,980 + fabA MCAODC_07125 0.57 -0.1 1,447,980 + fabA MCAODC_07125 0.57 -0.1 1,447,981 - fabA MCAODC_07125 0.57 -1.5 1,447,981 - fabA MCAODC_07125 0.57 -0.8 1,448,019 - fabA MCAODC_07125 0.68 -0.1 1,448,137 - -3.4 1,448,145 + -1.7 1,448,145 + +0.0 1,448,146 - +1.1 1,448,146 - -3.3 1,448,146 - -0.3 1,448,146 - -0.1 1,448,156 - -1.1 1,448,156 - +1.7 1,448,171 + MCAODC_07130 0.13 +0.2 1,448,171 + MCAODC_07130 0.13 +0.3 1,448,172 - MCAODC_07130 0.13 -0.8 1,448,179 - MCAODC_07130 0.15 -0.3 1,448,216 + MCAODC_07130 0.24 -3.2 1,448,216 + MCAODC_07130 0.24 -1.7 1,448,244 + MCAODC_07130 0.31 -2.3 1,448,245 - MCAODC_07130 0.32 -0.1 1,448,245 - MCAODC_07130 0.32 -0.6 1,448,270 + MCAODC_07130 0.38 -2.2 1,448,271 - MCAODC_07130 0.38 +0.1 1,448,331 + MCAODC_07130 0.53 -2.6 1,448,331 + MCAODC_07130 0.53 -0.6 1,448,331 + MCAODC_07130 0.53 -1.0 1,448,409 + MCAODC_07130 0.72 +0.0 1,448,409 + MCAODC_07130 0.72 +0.9 1,448,409 + MCAODC_07130 0.72 +0.9 1,448,410 - MCAODC_07130 0.73 +0.0 1,448,410 - MCAODC_07130 0.73 +0.5 1,448,445 - MCAODC_07130 0.81 +0.3 1,448,445 - MCAODC_07130 0.81 -0.9 1,448,663 - +1.2 1,448,706 + MCAODC_07135 0.15 -0.3 1,448,706 + MCAODC_07135 0.15 -0.2 1,448,706 + MCAODC_07135 0.15 -1.2 1,448,706 + MCAODC_07135 0.15 -1.6 1,448,706 + MCAODC_07135 0.15 -1.3 1,448,707 - MCAODC_07135 0.15 +1.4 1,448,707 - MCAODC_07135 0.15 -0.7 1,448,707 - MCAODC_07135 0.15 +1.0 1,448,707 - MCAODC_07135 0.15 +0.1 1,448,707 - MCAODC_07135 0.15 +0.3 1,448,814 - MCAODC_07135 0.26 -0.0 1,448,814 - MCAODC_07135 0.26 -0.3 1,448,814 - MCAODC_07135 0.26 -1.1 1,448,815 + MCAODC_07135 0.27 -0.6 1,448,815 + MCAODC_07135 0.27 -0.0 1,448,815 + MCAODC_07135 0.27 +1.6 1,448,815 + MCAODC_07135 0.27 -0.1 1,448,815 + MCAODC_07135 0.27 +0.7 1,448,816 - MCAODC_07135 0.27 -0.0 1,448,816 - MCAODC_07135 0.27 +1.1 1,448,816 - MCAODC_07135 0.27 -3.2 1,448,816 - MCAODC_07135 0.27 +0.8 1,448,854 + MCAODC_07135 0.31 +0.1 1,448,854 + MCAODC_07135 0.31 +1.5 1,448,854 + MCAODC_07135 0.31 -0.5 1,448,880 + MCAODC_07135 0.34 -1.0 1,448,881 - MCAODC_07135 0.34 -0.6 1,449,029 + MCAODC_07135 0.50 +1.7 1,449,029 + MCAODC_07135 0.50 +0.8 1,449,078 - MCAODC_07135 0.56 +0.8
Or see this region's nucleotide sequence