Strain Fitness in Escherichia coli ECRC101 around MCAODC_04095
Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Glucose |
---|---|---|---|---|---|
remove | |||||
825,185 | + | argE | MCAODC_04090 | 0.45 | -0.3 |
825,185 | + | argE | MCAODC_04090 | 0.45 | -1.0 |
825,185 | + | argE | MCAODC_04090 | 0.45 | -2.5 |
825,186 | - | argE | MCAODC_04090 | 0.45 | -3.9 |
825,186 | - | argE | MCAODC_04090 | 0.45 | -4.2 |
825,204 | + | argE | MCAODC_04090 | 0.47 | -0.2 |
825,204 | + | argE | MCAODC_04090 | 0.47 | -4.3 |
825,204 | + | argE | MCAODC_04090 | 0.47 | -3.3 |
825,204 | + | argE | MCAODC_04090 | 0.47 | -2.7 |
825,204 | + | argE | MCAODC_04090 | 0.47 | -2.7 |
825,205 | - | argE | MCAODC_04090 | 0.47 | -3.2 |
825,205 | - | argE | MCAODC_04090 | 0.47 | -0.4 |
825,205 | - | argE | MCAODC_04090 | 0.47 | -3.1 |
825,205 | - | argE | MCAODC_04090 | 0.47 | -1.0 |
825,213 | + | argE | MCAODC_04090 | 0.47 | -2.1 |
825,213 | + | argE | MCAODC_04090 | 0.47 | -2.7 |
825,214 | - | argE | MCAODC_04090 | 0.47 | -0.3 |
825,214 | - | argE | MCAODC_04090 | 0.47 | -0.6 |
825,231 | + | argE | MCAODC_04090 | 0.49 | -2.9 |
825,232 | - | argE | MCAODC_04090 | 0.49 | -4.6 |
825,277 | - | argE | MCAODC_04090 | 0.53 | -1.9 |
825,282 | + | argE | MCAODC_04090 | 0.53 | -1.8 |
825,283 | - | argE | MCAODC_04090 | 0.53 | -4.0 |
825,284 | + | argE | MCAODC_04090 | 0.53 | -2.8 |
825,284 | + | argE | MCAODC_04090 | 0.53 | -3.2 |
825,284 | + | argE | MCAODC_04090 | 0.53 | -5.4 |
825,285 | - | argE | MCAODC_04090 | 0.54 | -1.6 |
825,285 | - | argE | MCAODC_04090 | 0.54 | -2.6 |
825,285 | - | argE | MCAODC_04090 | 0.54 | -2.6 |
825,290 | + | argE | MCAODC_04090 | 0.54 | -1.5 |
825,290 | + | argE | MCAODC_04090 | 0.54 | -1.0 |
825,290 | + | argE | MCAODC_04090 | 0.54 | -1.1 |
825,290 | + | argE | MCAODC_04090 | 0.54 | -4.3 |
825,291 | - | argE | MCAODC_04090 | 0.54 | -3.0 |
825,291 | - | argE | MCAODC_04090 | 0.54 | -2.6 |
825,291 | - | argE | MCAODC_04090 | 0.54 | -3.6 |
825,291 | - | argE | MCAODC_04090 | 0.54 | +0.4 |
825,291 | - | argE | MCAODC_04090 | 0.54 | -1.3 |
825,291 | - | argE | MCAODC_04090 | 0.54 | -3.4 |
825,291 | - | argE | MCAODC_04090 | 0.54 | -1.4 |
825,313 | - | argE | MCAODC_04090 | 0.56 | -2.6 |
825,352 | + | argE | MCAODC_04090 | 0.59 | -2.7 |
825,352 | + | argE | MCAODC_04090 | 0.59 | -1.0 |
825,353 | - | argE | MCAODC_04090 | 0.59 | -4.6 |
825,379 | - | argE | MCAODC_04090 | 0.62 | -2.8 |
825,397 | - | argE | MCAODC_04090 | 0.63 | -3.4 |
825,417 | + | argE | MCAODC_04090 | 0.65 | -4.0 |
825,417 | + | argE | MCAODC_04090 | 0.65 | -1.5 |
825,418 | - | argE | MCAODC_04090 | 0.65 | -1.5 |
825,423 | + | argE | MCAODC_04090 | 0.66 | -3.6 |
825,423 | + | argE | MCAODC_04090 | 0.66 | -1.7 |
825,423 | + | argE | MCAODC_04090 | 0.66 | -2.6 |
825,423 | + | argE | MCAODC_04090 | 0.66 | -5.2 |
825,424 | - | argE | MCAODC_04090 | 0.66 | -0.0 |
825,448 | - | argE | MCAODC_04090 | 0.68 | -4.0 |
825,489 | + | argE | MCAODC_04090 | 0.71 | -0.9 |
825,490 | - | argE | MCAODC_04090 | 0.71 | -5.3 |
825,490 | - | argE | MCAODC_04090 | 0.71 | -2.6 |
825,490 | - | argE | MCAODC_04090 | 0.71 | -2.1 |
825,581 | - | argE | MCAODC_04090 | 0.79 | -4.3 |
825,655 | + | argE | MCAODC_04090 | 0.86 | -1.7 |
825,655 | + | argE | MCAODC_04090 | 0.86 | -1.7 |
825,656 | - | argE | MCAODC_04090 | 0.86 | -3.3 |
825,656 | - | argE | MCAODC_04090 | 0.86 | -3.7 |
825,656 | - | argE | MCAODC_04090 | 0.86 | -1.1 |
825,686 | + | argE | MCAODC_04090 | 0.88 | -3.8 |
825,687 | - | argE | MCAODC_04090 | 0.88 | -2.2 |
825,721 | - | -3.1 | |||
825,746 | - | -5.0 | |||
825,763 | - | -0.2 | |||
825,763 | - | -3.2 | |||
825,763 | - | -1.0 | |||
825,817 | + | -0.1 | |||
825,883 | + | +0.6 | |||
825,883 | + | -0.2 | |||
825,883 | + | +0.5 | |||
825,884 | - | -0.8 | |||
825,921 | - | +0.4 | |||
825,934 | + | +0.7 | |||
825,934 | + | -1.9 | |||
825,934 | + | +0.4 | |||
825,935 | - | +1.5 | |||
825,962 | + | -0.1 | |||
825,968 | - | +0.6 | |||
825,994 | - | -1.2 | |||
825,994 | - | +0.0 | |||
825,994 | - | +0.9 | |||
826,012 | + | -0.8 | |||
826,016 | + | -3.2 | |||
826,017 | - | -0.0 | |||
826,017 | - | +0.0 | |||
826,017 | - | +0.5 | |||
826,063 | - | -2.9 | |||
826,072 | + | -0.4 | |||
826,072 | + | +0.5 | |||
826,073 | - | -5.0 | |||
826,074 | + | -1.6 | |||
826,075 | - | -3.7 | |||
826,075 | - | -0.5 | |||
826,105 | - | -4.1 | |||
826,105 | - | -2.5 | |||
826,138 | + | -2.7 | |||
826,148 | + | -1.1 | |||
826,148 | + | -0.3 | |||
826,149 | - | -3.5 | |||
826,149 | - | -1.3 | |||
826,167 | + | -2.6 | |||
826,168 | - | -2.3 | |||
826,170 | + | -3.9 | |||
826,170 | + | -4.6 | |||
826,171 | - | -4.5 | |||
826,171 | - | -2.4 | |||
826,171 | - | -1.1 | |||
826,184 | - | -3.6 | |||
826,184 | - | -2.5 | |||
826,197 | + | -4.2 | |||
826,197 | + | -1.3 | |||
826,198 | - | -1.7 | |||
826,198 | - | -2.3 | |||
826,198 | - | -2.1 | |||
826,200 | + | -5.0 | |||
826,201 | - | -1.0 | |||
826,201 | - | -3.0 | |||
826,201 | - | -2.6 | |||
826,209 | + | -2.7 | |||
826,209 | + | -1.6 | |||
826,209 | + | -0.8 | |||
826,210 | - | -2.4 | |||
826,210 | - | -3.0 | |||
826,274 | + | -2.8 | |||
826,274 | + | -3.4 | |||
826,287 | + | -2.6 | |||
826,287 | + | -3.5 | |||
826,288 | - | -5.0 | |||
826,288 | - | -1.6 | |||
826,288 | - | -4.0 | |||
826,337 | + | -3.5 | |||
826,338 | - | -4.0 | |||
826,349 | + | -2.0 | |||
826,395 | + | -0.8 | |||
826,432 | + | -3.6 | |||
826,433 | - | -3.7 | |||
826,433 | - | -1.5 | |||
826,497 | + | ppc | MCAODC_04095 | 0.12 | -6.0 |
826,497 | + | ppc | MCAODC_04095 | 0.12 | -1.6 |
826,498 | - | ppc | MCAODC_04095 | 0.12 | -3.3 |
826,596 | + | ppc | MCAODC_04095 | 0.16 | -3.2 |
826,605 | + | ppc | MCAODC_04095 | 0.16 | -4.3 |
826,606 | - | ppc | MCAODC_04095 | 0.16 | -2.8 |
826,644 | - | ppc | MCAODC_04095 | 0.18 | -1.9 |
826,644 | - | ppc | MCAODC_04095 | 0.18 | -3.5 |
826,644 | - | ppc | MCAODC_04095 | 0.18 | -0.9 |
826,666 | - | ppc | MCAODC_04095 | 0.19 | -3.0 |
826,747 | - | ppc | MCAODC_04095 | 0.22 | -4.8 |
826,767 | - | ppc | MCAODC_04095 | 0.22 | -3.2 |
826,793 | + | ppc | MCAODC_04095 | 0.23 | -2.6 |
826,796 | + | ppc | MCAODC_04095 | 0.24 | -4.4 |
826,905 | + | ppc | MCAODC_04095 | 0.28 | -1.5 |
827,239 | + | ppc | MCAODC_04095 | 0.40 | -3.4 |
827,249 | - | ppc | MCAODC_04095 | 0.41 | -5.8 |
827,277 | + | ppc | MCAODC_04095 | 0.42 | -3.3 |
827,277 | + | ppc | MCAODC_04095 | 0.42 | -4.3 |
827,278 | - | ppc | MCAODC_04095 | 0.42 | -4.3 |
827,346 | + | ppc | MCAODC_04095 | 0.44 | -3.1 |
827,585 | - | ppc | MCAODC_04095 | 0.53 | -3.1 |
827,585 | - | ppc | MCAODC_04095 | 0.53 | +1.2 |
827,842 | + | ppc | MCAODC_04095 | 0.63 | -4.1 |
828,027 | + | ppc | MCAODC_04095 | 0.70 | -4.8 |
828,027 | + | ppc | MCAODC_04095 | 0.70 | -2.3 |
828,028 | - | ppc | MCAODC_04095 | 0.70 | -4.4 |
828,028 | - | ppc | MCAODC_04095 | 0.70 | -0.4 |
828,028 | - | ppc | MCAODC_04095 | 0.70 | -4.1 |
828,028 | - | ppc | MCAODC_04095 | 0.70 | +0.8 |
828,032 | - | ppc | MCAODC_04095 | 0.70 | -4.4 |
828,032 | - | ppc | MCAODC_04095 | 0.70 | -4.8 |
828,032 | - | ppc | MCAODC_04095 | 0.70 | -1.0 |
828,138 | + | ppc | MCAODC_04095 | 0.74 | -3.7 |
828,138 | + | ppc | MCAODC_04095 | 0.74 | -0.2 |
828,139 | - | ppc | MCAODC_04095 | 0.74 | -0.2 |
828,139 | - | ppc | MCAODC_04095 | 0.74 | -3.5 |
828,139 | - | ppc | MCAODC_04095 | 0.74 | -5.0 |
828,139 | - | ppc | MCAODC_04095 | 0.74 | -5.2 |
828,149 | + | ppc | MCAODC_04095 | 0.75 | -4.5 |
828,149 | + | ppc | MCAODC_04095 | 0.75 | -3.1 |
828,149 | + | ppc | MCAODC_04095 | 0.75 | -2.5 |
828,149 | + | ppc | MCAODC_04095 | 0.75 | -2.0 |
828,149 | + | ppc | MCAODC_04095 | 0.75 | -2.2 |
828,149 | + | ppc | MCAODC_04095 | 0.75 | -3.0 |
828,150 | - | ppc | MCAODC_04095 | 0.75 | -2.1 |
828,172 | + | ppc | MCAODC_04095 | 0.75 | -3.7 |
828,182 | - | ppc | MCAODC_04095 | 0.76 | -4.3 |
828,185 | + | ppc | MCAODC_04095 | 0.76 | -4.6 |
828,185 | + | ppc | MCAODC_04095 | 0.76 | -3.3 |
828,186 | - | ppc | MCAODC_04095 | 0.76 | -3.2 |
828,212 | - | ppc | MCAODC_04095 | 0.77 | -2.3 |
828,212 | - | ppc | MCAODC_04095 | 0.77 | -1.9 |
828,212 | - | ppc | MCAODC_04095 | 0.77 | +0.5 |
828,212 | - | ppc | MCAODC_04095 | 0.77 | -4.8 |
828,306 | - | ppc | MCAODC_04095 | 0.81 | -2.3 |
828,375 | + | ppc | MCAODC_04095 | 0.83 | -0.2 |
828,375 | + | ppc | MCAODC_04095 | 0.83 | -3.2 |
828,426 | + | ppc | MCAODC_04095 | 0.85 | -3.7 |
828,426 | + | ppc | MCAODC_04095 | 0.85 | -2.8 |
828,427 | - | ppc | MCAODC_04095 | 0.85 | -3.4 |
828,427 | - | ppc | MCAODC_04095 | 0.85 | -2.9 |
828,511 | + | ppc | MCAODC_04095 | 0.88 | -2.1 |
828,511 | + | ppc | MCAODC_04095 | 0.88 | -2.8 |
828,512 | - | ppc | MCAODC_04095 | 0.88 | -1.9 |
828,514 | + | ppc | MCAODC_04095 | 0.88 | -2.0 |
828,531 | - | ppc | MCAODC_04095 | 0.89 | -3.9 |
828,551 | + | ppc | MCAODC_04095 | 0.90 | -4.3 |
828,555 | + | ppc | MCAODC_04095 | 0.90 | -2.7 |
828,555 | + | ppc | MCAODC_04095 | 0.90 | -2.5 |
828,654 | + | -3.0 | |||
828,654 | + | -3.9 | |||
828,654 | + | -4.0 | |||
828,663 | - | -2.9 | |||
828,670 | - | -1.8 | |||
828,673 | + | -3.2 | |||
828,674 | - | -2.7 | |||
828,693 | - | -2.8 | |||
828,783 | + | -1.9 | |||
828,784 | - | -0.8 | |||
828,784 | - | -3.4 | |||
828,804 | + | -4.3 | |||
828,804 | + | -3.6 | |||
828,804 | + | -3.2 | |||
828,804 | + | -3.9 | |||
828,804 | + | -4.8 | |||
828,805 | - | -4.0 | |||
828,810 | + | +0.7 | |||
828,811 | - | -3.9 | |||
828,813 | + | -3.7 | |||
828,872 | + | -2.4 | |||
828,872 | + | +0.5 | |||
828,873 | - | +0.4 | |||
828,873 | - | +1.1 | |||
828,883 | + | -1.2 | |||
828,883 | + | +0.1 | |||
828,883 | + | +0.3 | |||
828,883 | + | +1.3 | |||
828,884 | - | +0.6 | |||
828,884 | - | -1.7 | |||
828,901 | + | +1.3 | |||
828,901 | + | +0.8 | |||
828,903 | + | +0.1 | |||
828,903 | + | +0.5 | |||
828,904 | - | +0.2 | |||
828,947 | + | +1.4 | |||
828,947 | + | -0.1 | |||
828,947 | + | -0.4 | |||
828,948 | - | -0.3 | |||
828,948 | - | -0.2 | |||
828,948 | - | -0.2 | |||
828,968 | - | -2.8 | |||
829,001 | + | +0.1 | |||
829,001 | + | -1.4 | |||
829,001 | + | +0.1 | |||
829,002 | - | -1.8 | |||
829,002 | - | -0.2 | |||
829,002 | - | +0.6 | |||
829,002 | - | +2.5 | |||
829,002 | - | +3.5 | |||
829,002 | - | -1.9 | |||
829,002 | - | +0.7 | |||
829,002 | - | +0.2 | |||
829,002 | - | +0.6 | |||
829,002 | - | -0.7 | |||
829,004 | + | +0.8 | |||
829,004 | + | -1.9 | |||
829,004 | + | +0.3 | |||
829,004 | + | +1.7 | |||
829,004 | + | +0.8 | |||
829,004 | + | -0.9 | |||
829,005 | - | +0.7 | |||
829,005 | - | +0.6 | |||
829,005 | - | -1.1 | |||
829,005 | - | +0.0 | |||
829,005 | - | +0.9 | |||
829,028 | + | -0.4 | |||
829,028 | + | -0.1 | |||
829,029 | - | +0.5 | |||
829,071 | + | -0.9 | |||
829,096 | + | +0.7 | |||
829,097 | - | -3.0 | |||
829,106 | + | +1.6 | |||
829,106 | + | -0.0 | |||
829,107 | - | +0.9 | |||
829,107 | - | +0.7 | |||
829,110 | + | +0.1 | |||
829,110 | + | +0.4 | |||
829,111 | - | +1.3 | |||
829,111 | - | -0.6 | |||
829,111 | - | +0.5 | |||
829,111 | - | +1.4 | |||
829,122 | + | -0.2 | |||
829,124 | + | +0.1 | |||
829,124 | + | -0.0 | |||
829,124 | + | -2.7 | |||
829,125 | - | -1.2 | |||
829,125 | - | +0.2 | |||
829,125 | - | -1.1 | |||
829,174 | + | +0.3 | |||
829,212 | - | ibeC | MCAODC_04100 | 0.12 | +0.0 |
829,212 | - | ibeC | MCAODC_04100 | 0.12 | -0.0 |
829,266 | + | ibeC | MCAODC_04100 | 0.15 | -3.6 |
829,267 | - | ibeC | MCAODC_04100 | 0.15 | -0.9 |
829,267 | - | ibeC | MCAODC_04100 | 0.15 | +0.2 |
829,267 | - | ibeC | MCAODC_04100 | 0.15 | +0.2 |
829,269 | + | ibeC | MCAODC_04100 | 0.15 | +0.1 |
829,278 | + | ibeC | MCAODC_04100 | 0.16 | -0.3 |
829,278 | + | ibeC | MCAODC_04100 | 0.16 | -2.1 |
829,279 | - | ibeC | MCAODC_04100 | 0.16 | -1.9 |
829,279 | - | ibeC | MCAODC_04100 | 0.16 | -0.2 |
829,279 | - | ibeC | MCAODC_04100 | 0.16 | +0.0 |
829,347 | + | ibeC | MCAODC_04100 | 0.20 | -1.2 |
829,348 | - | ibeC | MCAODC_04100 | 0.20 | -1.1 |
829,351 | + | ibeC | MCAODC_04100 | 0.20 | +0.2 |
829,351 | + | ibeC | MCAODC_04100 | 0.20 | +0.2 |
829,351 | + | ibeC | MCAODC_04100 | 0.20 | +0.3 |
829,352 | - | ibeC | MCAODC_04100 | 0.20 | +0.3 |
829,395 | + | ibeC | MCAODC_04100 | 0.22 | -0.3 |
829,397 | + | ibeC | MCAODC_04100 | 0.23 | -0.2 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | -0.6 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | -0.7 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | +0.7 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | +0.2 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | +0.1 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | -0.1 |
829,440 | + | ibeC | MCAODC_04100 | 0.25 | +0.3 |
829,441 | - | ibeC | MCAODC_04100 | 0.25 | -0.7 |
829,441 | - | ibeC | MCAODC_04100 | 0.25 | +2.1 |
829,441 | - | ibeC | MCAODC_04100 | 0.25 | +0.3 |
829,441 | - | ibeC | MCAODC_04100 | 0.25 | +0.0 |
829,443 | - | ibeC | MCAODC_04100 | 0.25 | +0.1 |
829,443 | - | ibeC | MCAODC_04100 | 0.25 | +1.3 |
829,443 | - | ibeC | MCAODC_04100 | 0.25 | -3.1 |
829,461 | + | ibeC | MCAODC_04100 | 0.26 | +0.8 |
829,461 | + | ibeC | MCAODC_04100 | 0.26 | -1.9 |
829,462 | - | ibeC | MCAODC_04100 | 0.26 | +0.9 |
829,485 | + | ibeC | MCAODC_04100 | 0.28 | +0.1 |
829,485 | + | ibeC | MCAODC_04100 | 0.28 | -0.6 |
829,486 | - | ibeC | MCAODC_04100 | 0.28 | +0.4 |
829,518 | - | ibeC | MCAODC_04100 | 0.30 | -2.1 |
829,518 | - | ibeC | MCAODC_04100 | 0.30 | -1.3 |
829,518 | - | ibeC | MCAODC_04100 | 0.30 | -0.2 |
829,608 | + | ibeC | MCAODC_04100 | 0.35 | -2.1 |
829,609 | - | ibeC | MCAODC_04100 | 0.35 | +0.4 |
829,609 | - | ibeC | MCAODC_04100 | 0.35 | +1.0 |
829,611 | + | ibeC | MCAODC_04100 | 0.35 | +0.6 |
829,612 | - | ibeC | MCAODC_04100 | 0.35 | -1.4 |
829,612 | - | ibeC | MCAODC_04100 | 0.35 | -0.6 |
829,630 | + | ibeC | MCAODC_04100 | 0.36 | -2.3 |
829,631 | - | ibeC | MCAODC_04100 | 0.36 | -1.1 |
829,648 | + | ibeC | MCAODC_04100 | 0.37 | +0.7 |
829,661 | + | ibeC | MCAODC_04100 | 0.38 | +0.3 |
829,661 | + | ibeC | MCAODC_04100 | 0.38 | -1.8 |
829,662 | - | ibeC | MCAODC_04100 | 0.38 | -3.2 |
829,662 | - | ibeC | MCAODC_04100 | 0.38 | +1.3 |
829,662 | - | ibeC | MCAODC_04100 | 0.38 | -0.7 |
829,720 | + | ibeC | MCAODC_04100 | 0.41 | +0.2 |
829,768 | - | ibeC | MCAODC_04100 | 0.44 | +0.0 |
829,811 | + | ibeC | MCAODC_04100 | 0.46 | +0.6 |
829,811 | + | ibeC | MCAODC_04100 | 0.46 | +2.3 |
829,812 | - | ibeC | MCAODC_04100 | 0.47 | -1.0 |
Or see this region's nucleotide sequence