Strain Fitness in Escherichia coli ECRC101 around MCAODC_01130

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsZ and ftsA are separated by 60 nucleotidesftsA and ftsQ overlap by 4 nucleotidesftsQ and ddlB are separated by 1 nucleotides MCAODC_01120: ftsZ - cell division protein FtsZ, at 206,149 to 207,300 ftsZ MCAODC_01130: ftsA - cell division protein FtsA, at 207,361 to 208,623 ftsA MCAODC_01135: ftsQ - cell division protein FtsQ, at 208,620 to 209,450 ftsQ MCAODC_01140: ddlB - D-alanine--D-alanine ligase, at 209,452 to 210,372 ddlB Position (kb) 207 208 209Strain fitness (log2 ratio) -1 0 1at 208.659 kb on - strandat 209.500 kb on - strandat 209.557 kb on - strand, within ddlBat 209.574 kb on - strand, within ddlBat 209.608 kb on - strand, within ddlBat 209.608 kb on - strand, within ddlBat 209.608 kb on - strand, within ddlBat 209.608 kb on - strand, within ddlB

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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208,659 - -0.6
209,500 - +1.5
209,557 - ddlB MCAODC_01140 0.11 +1.1
209,574 - ddlB MCAODC_01140 0.13 +0.8
209,608 - ddlB MCAODC_01140 0.17 -0.5
209,608 - ddlB MCAODC_01140 0.17 +0.7
209,608 - ddlB MCAODC_01140 0.17 -0.6
209,608 - ddlB MCAODC_01140 0.17 +0.4

Or see this region's nucleotide sequence