Strain Fitness in Erwinia amylovora T8 around OLJFJH_17355

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-2
3,660,228	+				+0.2
3,660,229	-				+0.5
3,660,241	-				+0.2
3,660,241	-				-0.8
3,660,254	+				-1.6
3,660,255	-				-0.8
3,660,273	+				-0.9
3,660,273	+				+0.2
3,660,274	-				-0.2
3,660,274	-				+0.2
3,660,345	+				+1.8
3,660,387	+		OLJFJH_17350	0.11	-0.6
3,660,388	-		OLJFJH_17350	0.11	+0.6
3,660,459	-		OLJFJH_17350	0.19	-1.3
3,660,493	+		OLJFJH_17350	0.23	-0.4
3,660,493	+		OLJFJH_17350	0.23	+3.1
3,660,493	+		OLJFJH_17350	0.23	+0.2
3,660,493	+		OLJFJH_17350	0.23	-0.7
3,660,493	+		OLJFJH_17350	0.23	+1.2
3,660,494	-		OLJFJH_17350	0.23	+0.3
3,660,494	-		OLJFJH_17350	0.23	-0.8
3,660,494	-		OLJFJH_17350	0.23	-0.1
3,660,494	-		OLJFJH_17350	0.23	-0.7
3,660,533	+		OLJFJH_17350	0.27	+0.0
3,660,544	+		OLJFJH_17350	0.28	-1.0
3,660,544	+		OLJFJH_17350	0.28	+0.2
3,660,677	-		OLJFJH_17350	0.43	+0.1
3,660,795	+		OLJFJH_17350	0.57	-0.6
3,660,958	-		OLJFJH_17350	0.75	-0.2
3,661,023	+		OLJFJH_17350	0.82	-0.2
3,661,023	+		OLJFJH_17350	0.82	+0.2
3,661,026	+		OLJFJH_17350	0.82	-0.9
3,661,027	-		OLJFJH_17350	0.83	-0.1
3,661,049	+		OLJFJH_17350	0.85	-0.2
3,661,336	-				+0.2
3,661,474	+		OLJFJH_17355	0.15	+0.9
3,661,474	+		OLJFJH_17355	0.15	-0.8
3,661,475	-		OLJFJH_17355	0.15	-1.2
3,661,475	-		OLJFJH_17355	0.15	-0.3
3,661,790	-		OLJFJH_17355	0.31	-0.1
3,661,813	+		OLJFJH_17355	0.32	-0.4
3,661,843	+		OLJFJH_17355	0.34	-0.5
3,661,968	+		OLJFJH_17355	0.40	+0.6
3,661,969	-		OLJFJH_17355	0.40	-0.0
3,661,974	-		OLJFJH_17355	0.40	-1.1
3,662,028	+		OLJFJH_17355	0.43	-1.1
3,662,029	-		OLJFJH_17355	0.43	-0.0
3,662,029	-		OLJFJH_17355	0.43	+0.3
3,662,207	+		OLJFJH_17355	0.52	-0.2
3,662,207	+		OLJFJH_17355	0.52	-0.6
3,662,226	-		OLJFJH_17355	0.53	-0.3
3,662,302	+		OLJFJH_17355	0.57	-1.0
3,662,302	+		OLJFJH_17355	0.57	+0.3
3,662,304	+		OLJFJH_17355	0.57	-0.7
3,662,304	+		OLJFJH_17355	0.57	-1.0
3,662,304	+		OLJFJH_17355	0.57	-0.3
3,662,304	+		OLJFJH_17355	0.57	-0.7
3,662,304	+		OLJFJH_17355	0.57	-2.0
3,662,305	-		OLJFJH_17355	0.57	-0.5
3,662,305	-		OLJFJH_17355	0.57	+0.0
3,662,506	+		OLJFJH_17355	0.67	+0.6
3,662,571	+		OLJFJH_17355	0.70	-0.2
3,662,571	+		OLJFJH_17355	0.70	-0.4
3,662,571	+		OLJFJH_17355	0.70	+0.1
3,662,572	-		OLJFJH_17355	0.70	-0.3
3,662,636	-		OLJFJH_17355	0.74	+0.1
3,662,671	+		OLJFJH_17355	0.75	-0.6
3,662,672	-		OLJFJH_17355	0.75	+1.0
3,662,672	-		OLJFJH_17355	0.75	+0.8
3,662,672	-		OLJFJH_17355	0.75	-0.5
3,662,829	+		OLJFJH_17355	0.83	+0.1
3,662,902	+		OLJFJH_17355	0.87	+0.7
3,662,942	-		OLJFJH_17355	0.89	-0.5
3,662,942	-		OLJFJH_17355	0.89	-0.5
3,662,974	+				+0.7
3,662,991	+				+0.8
3,662,991	+				+0.7
3,662,992	-				-0.1
3,663,146	+				+1.1
3,663,147	-				+0.1
3,663,147	-				-0.0
3,663,177	+				-0.3
3,663,177	+				-1.1
3,663,177	+				+0.1
3,663,177	+				+0.6
3,663,177	+				-0.2
3,663,178	-				+1.2
3,663,178	-				-0.2
3,663,242	+				+0.4
3,663,242	+				-0.2
3,663,242	+				+0.0
3,663,243	-				+5.2
3,663,243	-				-0.4
3,663,302	-		OLJFJH_17360	0.15	-0.6
3,663,304	-		OLJFJH_17360	0.15	+0.7
3,663,304	-		OLJFJH_17360	0.15	-0.6
3,663,474	-		OLJFJH_17360	0.32	-0.3
3,663,474	-		OLJFJH_17360	0.32	-0.4
3,663,504	-		OLJFJH_17360	0.35	+0.2
3,663,570	+		OLJFJH_17360	0.42	-0.1
3,663,570	+		OLJFJH_17360	0.42	+0.3
3,663,628	-		OLJFJH_17360	0.48	+0.3
3,663,630	+		OLJFJH_17360	0.48	-0.1
3,663,662	+		OLJFJH_17360	0.52	+0.2
3,664,074	+				+0.9
3,664,086	+				-0.4
3,664,089	-				+0.1
3,664,158	-				+2.4