Strain Fitness in Erwinia amylovora T8 around OLJFJH_06420

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-2
1,296,684	+				-0.2
1,296,684	+				+0.2
1,296,875	+		OLJFJH_06415	0.15	+0.4
1,296,876	-		OLJFJH_06415	0.15	-0.9
1,296,987	-		OLJFJH_06415	0.27	+1.8
1,297,174	+		OLJFJH_06415	0.48	+0.3
1,297,174	+		OLJFJH_06415	0.48	-1.7
1,297,174	+		OLJFJH_06415	0.48	-0.1
1,297,175	-		OLJFJH_06415	0.48	+1.3
1,297,175	-		OLJFJH_06415	0.48	-2.0
1,297,247	+		OLJFJH_06415	0.56	+0.8
1,297,248	-		OLJFJH_06415	0.56	+0.3
1,297,269	+		OLJFJH_06415	0.58	-1.9
1,297,269	+		OLJFJH_06415	0.58	-0.9
1,297,269	+		OLJFJH_06415	0.58	-1.1
1,297,456	-		OLJFJH_06415	0.79	+0.1
1,297,494	+		OLJFJH_06415	0.83	-1.3
1,297,494	+		OLJFJH_06415	0.83	-0.5
1,297,494	+		OLJFJH_06415	0.83	-0.9
1,297,494	+		OLJFJH_06415	0.83	-1.9
1,297,494	+		OLJFJH_06415	0.83	+0.3
1,297,494	+		OLJFJH_06415	0.83	+0.3
1,297,494	+		OLJFJH_06415	0.83	-1.3
1,297,495	-		OLJFJH_06415	0.83	-1.8
1,297,495	-		OLJFJH_06415	0.83	-0.1
1,297,495	-		OLJFJH_06415	0.83	+0.1
1,297,495	-		OLJFJH_06415	0.83	-1.1
1,297,570	+				-0.9
1,297,570	+				-0.9
1,297,570	+				-0.6
1,297,571	-				-0.0
1,297,571	-				-1.2
1,297,607	-				-0.1
1,297,607	-				-0.0
1,297,657	-				-0.5
1,297,710	+				+0.6
1,297,710	+				+2.2
1,297,710	+				-0.5
1,297,711	-				-0.2
1,297,784	-		OLJFJH_06420	0.19	+0.0
1,297,793	+		OLJFJH_06420	0.20	+0.8
1,297,895	+		OLJFJH_06420	0.35	-0.0
1,297,896	-		OLJFJH_06420	0.35	+0.8
1,298,030	+		OLJFJH_06420	0.53	-0.6
1,298,030	+		OLJFJH_06420	0.53	-0.8
1,298,031	-		OLJFJH_06420	0.54	+0.3
1,298,031	-		OLJFJH_06420	0.54	-1.4
1,298,092	-		OLJFJH_06420	0.62	-1.4
1,298,103	-		OLJFJH_06420	0.64	+0.9
1,298,103	-		OLJFJH_06420	0.64	-0.4
1,298,104	+		OLJFJH_06420	0.64	-0.6
1,298,107	+		OLJFJH_06420	0.64	-0.6
1,298,108	-		OLJFJH_06420	0.64	+0.8
1,298,108	-		OLJFJH_06420	0.64	+0.4
1,298,140	-		OLJFJH_06420	0.69	-0.7
1,298,151	+		OLJFJH_06420	0.70	+0.7
1,298,151	+		OLJFJH_06420	0.70	-0.5
1,298,151	+		OLJFJH_06420	0.70	-0.7
1,298,151	+		OLJFJH_06420	0.70	-0.4
1,298,151	+		OLJFJH_06420	0.70	-0.3
1,298,151	+		OLJFJH_06420	0.70	-0.4
1,298,151	+		OLJFJH_06420	0.70	+0.3
1,298,152	-		OLJFJH_06420	0.70	-0.1
1,298,239	+		OLJFJH_06420	0.83	-0.2
1,298,239	+		OLJFJH_06420	0.83	-0.1
1,298,239	+		OLJFJH_06420	0.83	-0.4
1,298,239	+		OLJFJH_06420	0.83	-0.9
1,298,359	+				-1.1
1,298,360	-				-0.3
1,298,361	+				+0.8
1,298,362	-				+1.8
1,298,362	-				-0.4
1,298,421	-				-1.0
1,298,522	+				-0.7
1,298,523	-				-0.7
1,298,567	-				+0.6
1,298,639	+		OLJFJH_06425	0.10	+0.1
1,298,640	-		OLJFJH_06425	0.10	-0.5
1,298,853	+		OLJFJH_06425	0.20	+0.1
1,298,853	+		OLJFJH_06425	0.20	+0.3
1,298,853	+		OLJFJH_06425	0.20	-0.3
1,298,853	+		OLJFJH_06425	0.20	-0.4
1,298,854	-		OLJFJH_06425	0.20	-0.2
1,298,854	-		OLJFJH_06425	0.20	-0.7
1,298,854	-		OLJFJH_06425	0.20	-0.1
1,298,936	+		OLJFJH_06425	0.24	+0.6
1,298,937	-		OLJFJH_06425	0.24	-0.6
1,298,941	-		OLJFJH_06425	0.24	+0.1
1,299,036	-		OLJFJH_06425	0.29	-0.2
1,299,210	-		OLJFJH_06425	0.37	+1.1
1,299,210	-		OLJFJH_06425	0.37	-0.6
1,299,250	+		OLJFJH_06425	0.39	+0.3
1,299,268	-		OLJFJH_06425	0.39	-2.0
1,299,284	+		OLJFJH_06425	0.40	-0.3
1,299,320	+		OLJFJH_06425	0.42	+2.0
1,299,320	+		OLJFJH_06425	0.42	+0.7
1,299,320	+		OLJFJH_06425	0.42	+0.5