Strain Fitness in Erwinia amylovora T8 around OLJFJH_16000

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-9
3,368,149	+		OLJFJH_15990	0.85	-2.8
3,368,228	-				-0.4
3,368,228	-				-2.2
3,368,228	-				-2.2
3,368,300	+				-0.1
3,368,300	+				-0.0
3,368,300	+				-1.3
3,368,300	+				-3.6
3,368,301	+				-3.3
3,368,301	-				-3.6
3,368,301	-				-0.5
3,368,301	-				+0.2
3,368,301	-				-2.8
3,368,301	-				-2.0
3,368,402	-				+0.4
3,368,402	-				-0.1
3,368,436	+				+0.4
3,368,436	+				-1.1
3,368,436	+				+2.2
3,368,436	+				+0.4
3,368,436	+				-0.7
3,368,570	+				-1.0
3,368,571	-				+0.3
3,368,571	-				-0.1
3,368,614	+				-1.3
3,368,679	-		OLJFJH_15995	0.22	-0.3
3,368,702	-		OLJFJH_15995	0.26	+1.3
3,368,702	-		OLJFJH_15995	0.26	-0.3
3,368,702	-		OLJFJH_15995	0.26	-0.2
3,368,702	-		OLJFJH_15995	0.26	-0.4
3,368,702	-		OLJFJH_15995	0.26	-1.1
3,368,702	-		OLJFJH_15995	0.26	-0.9
3,368,702	-		OLJFJH_15995	0.26	-0.3
3,368,704	-		OLJFJH_15995	0.26	+4.8
3,368,704	-		OLJFJH_15995	0.26	+3.6
3,368,704	-		OLJFJH_15995	0.26	-0.4
3,368,704	-		OLJFJH_15995	0.26	-2.8
3,368,704	-		OLJFJH_15995	0.26	+1.1
3,368,704	-		OLJFJH_15995	0.26	-0.6
3,368,787	+		OLJFJH_15995	0.41	-0.2
3,368,787	+		OLJFJH_15995	0.41	-1.6
3,368,787	+		OLJFJH_15995	0.41	+0.5
3,368,788	-		OLJFJH_15995	0.41	+0.4
3,368,897	+		OLJFJH_15995	0.61	-0.1
3,368,897	+		OLJFJH_15995	0.61	-0.5
3,368,997	+		OLJFJH_15995	0.79	+2.0
3,369,106	+				-1.0
3,369,107	-				-0.1
3,369,107	-				-0.5
3,369,107	-				+0.3
3,369,108	+				-0.6
3,369,108	+				-0.4
3,369,109	-				+0.9
3,369,109	-				-1.0
3,369,129	+				-0.9
3,369,130	-				+0.3
3,369,311	-		OLJFJH_16000	0.19	+0.3
3,369,435	-		OLJFJH_16000	0.32	-0.2
3,369,526	+		OLJFJH_16000	0.42	-0.6
3,369,526	+		OLJFJH_16000	0.42	-1.0
3,369,527	-		OLJFJH_16000	0.42	+0.4
3,369,559	+		OLJFJH_16000	0.45	+2.5
3,369,570	+		OLJFJH_16000	0.46	-1.3
3,369,570	+		OLJFJH_16000	0.46	-0.2
3,369,571	-		OLJFJH_16000	0.46	-0.7
3,369,693	-		OLJFJH_16000	0.59	-1.2
3,369,693	-		OLJFJH_16000	0.59	-2.1
3,369,750	+		OLJFJH_16000	0.65	-0.1
3,369,770	+		OLJFJH_16000	0.67	-0.3
3,369,771	-		OLJFJH_16000	0.67	-0.1
3,369,771	-		OLJFJH_16000	0.67	-0.3
3,369,790	+		OLJFJH_16000	0.69	-0.8
3,369,830	-		OLJFJH_16000	0.73	+1.5
3,370,013	+				-0.5
3,370,013	+				+0.7
3,370,026	+				+0.4
3,370,027	-				+0.5
3,370,046	-				+0.2
3,370,189	+		OLJFJH_16005	0.14	+0.5
3,370,547	-		OLJFJH_16005	0.71	-1.5
3,370,558	+		OLJFJH_16005	0.73	-0.0
3,370,558	+		OLJFJH_16005	0.73	+1.0
3,370,559	-		OLJFJH_16005	0.73	+2.4
3,370,678	+				+0.7
3,370,678	+				+1.4
3,370,678	+				+0.3
3,370,679	-				-0.4
3,370,679	-				-0.4
3,370,990	-		OLJFJH_16010	0.52	+0.4
3,371,044	+		OLJFJH_16010	0.62	-1.9
3,371,045	-		OLJFJH_16010	0.63	+0.9
3,371,054	+		OLJFJH_16010	0.64	-0.5
3,371,055	-		OLJFJH_16010	0.64	-0.7