Strain Fitness in Erwinia amylovora T8 around OLJFJH_18380

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
3,855,544	-				-0.5
3,855,622	+		OLJFJH_18370	0.18	+1.3
3,855,623	-		OLJFJH_18370	0.18	-2.5
3,855,655	+		OLJFJH_18370	0.23	-0.9
3,855,673	-		OLJFJH_18370	0.26	-1.8
3,855,714	-		OLJFJH_18370	0.33	-0.8
3,855,723	+		OLJFJH_18370	0.35	+1.8
3,855,925	-		OLJFJH_18370	0.69	-2.0
3,856,066	+				+0.6
3,856,066	+				+0.5
3,856,067	-				+0.1
3,856,097	+				+1.7
3,856,097	+				+0.1
3,856,097	+				-0.7
3,856,110	-				-0.7
3,856,110	-				-0.8
3,856,113	-				+0.2
3,856,127	-				-2.9
3,856,134	-				-1.1
3,856,202	-				-0.9
3,856,202	-				-0.8
3,856,317	+				-0.5
3,856,361	-				-2.4
3,856,372	+				+0.9
3,856,375	+				+1.2
3,856,376	-		OLJFJH_18375	0.10	+0.6
3,856,376	-		OLJFJH_18375	0.10	+0.8
3,856,376	-		OLJFJH_18375	0.10	-1.1
3,856,430	+		OLJFJH_18375	0.39	+1.1
3,856,431	-		OLJFJH_18375	0.39	+0.3
3,856,431	-		OLJFJH_18375	0.39	-0.8
3,856,431	-		OLJFJH_18375	0.39	+0.6
3,856,619	+		OLJFJH_18380	0.26	-1.1
3,856,859	+				-3.0
3,856,874	-				+0.3
3,856,911	+				-0.6
3,856,911	+				+1.2
3,856,912	-				-1.1
3,857,035	+				+0.3
3,857,140	+				+0.1
3,857,140	+				-1.6
3,857,141	-				+0.5
3,857,184	+		OLJFJH_18385	0.22	+0.8
3,857,187	+		OLJFJH_18385	0.23	+1.1
3,857,187	+		OLJFJH_18385	0.23	-1.6
3,857,188	-		OLJFJH_18385	0.24	-0.0
3,857,188	-		OLJFJH_18385	0.24	-1.3
3,857,276	-		OLJFJH_18385	0.68	-0.3
3,857,276	-		OLJFJH_18385	0.68	+0.1
3,857,353	+				-0.5
3,857,354	-				+0.3
3,857,354	-				+0.5
3,857,354	-				-0.5
3,857,357	+				-2.0
3,857,357	+				-1.0
3,857,357	+				-0.7
3,857,420	-		OLJFJH_18390	0.10	+0.4
3,857,446	-		OLJFJH_18390	0.14	-3.7
3,857,471	+		OLJFJH_18390	0.17	+0.6
3,857,472	-		OLJFJH_18390	0.17	-0.3
3,857,597	+		OLJFJH_18390	0.33	+2.7
3,857,667	-		OLJFJH_18390	0.42	+0.0
3,857,667	-		OLJFJH_18390	0.42	+0.7
3,857,667	-		OLJFJH_18390	0.42	-2.5
3,857,667	-		OLJFJH_18390	0.42	+0.5
3,857,667	-		OLJFJH_18390	0.42	+0.0
3,857,826	+		OLJFJH_18390	0.62	-1.4
3,857,827	-		OLJFJH_18390	0.62	-0.3
3,857,827	-		OLJFJH_18390	0.62	+1.2
3,857,827	-		OLJFJH_18390	0.62	-0.4