Strain Fitness in Erwinia amylovora T8 around OLJFJH_16675

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
3,521,246	+		OLJFJH_16665	0.58	+0.2
3,521,246	+		OLJFJH_16665	0.58	-2.5
3,521,251	-		OLJFJH_16665	0.58	-0.6
3,521,274	+		OLJFJH_16665	0.59	+0.1
3,521,275	-		OLJFJH_16665	0.59	+0.5
3,521,275	-		OLJFJH_16665	0.59	-0.6
3,521,285	+		OLJFJH_16665	0.60	+1.5
3,521,285	+		OLJFJH_16665	0.60	-0.6
3,521,285	+		OLJFJH_16665	0.60	-0.1
3,521,286	-		OLJFJH_16665	0.60	+1.4
3,521,286	-		OLJFJH_16665	0.60	+2.9
3,521,286	-		OLJFJH_16665	0.60	-1.4
3,521,286	-		OLJFJH_16665	0.60	+0.9
3,521,286	-		OLJFJH_16665	0.60	-0.8
3,521,290	-		OLJFJH_16665	0.60	-3.3
3,521,331	-		OLJFJH_16665	0.62	-0.8
3,521,331	-		OLJFJH_16665	0.62	+0.6
3,521,343	+		OLJFJH_16665	0.63	+1.6
3,521,343	+		OLJFJH_16665	0.63	+0.0
3,521,409	+		OLJFJH_16665	0.67	-1.2
3,521,715	+		OLJFJH_16665	0.84	-1.7
3,521,716	-		OLJFJH_16665	0.84	-1.4
3,521,787	+		OLJFJH_16665	0.88	-0.8
3,521,788	-		OLJFJH_16665	0.88	-3.2
3,521,948	+				+0.5
3,522,073	-		OLJFJH_16670	0.38	-0.9
3,522,079	-		OLJFJH_16670	0.41	-3.3
3,522,102	-		OLJFJH_16670	0.53	+0.4
3,522,104	+		OLJFJH_16670	0.54	-2.5
3,522,112	+		OLJFJH_16670	0.58	+0.2
3,522,113	-		OLJFJH_16670	0.58	-2.0
3,522,113	-		OLJFJH_16670	0.58	-0.9
3,522,113	-		OLJFJH_16670	0.58	-1.3
3,522,115	-		OLJFJH_16670	0.59	-1.2
3,522,115	-		OLJFJH_16670	0.59	-0.2
3,522,132	-		OLJFJH_16670	0.68	-0.0
3,522,133	+		OLJFJH_16670	0.69	+0.9
3,522,133	+		OLJFJH_16670	0.69	-2.2
3,522,133	+		OLJFJH_16670	0.69	+0.5
3,522,133	+		OLJFJH_16670	0.69	-2.4
3,522,133	+		OLJFJH_16670	0.69	+3.1
3,522,133	+		OLJFJH_16670	0.69	-0.7
3,522,134	-		OLJFJH_16670	0.69	+0.4
3,522,134	-		OLJFJH_16670	0.69	-1.7
3,522,134	-		OLJFJH_16670	0.69	+1.1
3,522,134	-		OLJFJH_16670	0.69	-0.6
3,522,134	-		OLJFJH_16670	0.69	+2.9
3,522,221	+				-1.8
3,522,221	+				+0.6
3,522,221	+				+0.8
3,522,221	+				+0.9
3,522,222	-				+2.6
3,522,222	-				-1.2
3,522,474	+		OLJFJH_16675	0.21	-2.1
3,522,475	-		OLJFJH_16675	0.21	-4.1
3,522,576	+		OLJFJH_16675	0.30	+0.1
3,522,577	-		OLJFJH_16675	0.30	-2.0
3,522,579	+		OLJFJH_16675	0.30	+0.7
3,522,580	-		OLJFJH_16675	0.30	-2.4
3,522,580	-		OLJFJH_16675	0.30	-1.7
3,522,580	-		OLJFJH_16675	0.30	-1.7
3,522,607	+		OLJFJH_16675	0.33	+0.5
3,522,727	-		OLJFJH_16675	0.44	-0.5
3,522,801	+		OLJFJH_16675	0.50	+0.0
3,522,801	+		OLJFJH_16675	0.50	-0.7
3,522,801	+		OLJFJH_16675	0.50	-0.0
3,522,801	+		OLJFJH_16675	0.50	-3.2
3,522,896	+		OLJFJH_16675	0.59	+0.4
3,522,897	-		OLJFJH_16675	0.59	-0.6
3,523,145	+		OLJFJH_16675	0.82	-0.0
3,523,145	+		OLJFJH_16675	0.82	-1.9
3,523,146	-		OLJFJH_16675	0.82	+0.3
3,523,231	+		OLJFJH_16675	0.89	-1.9
3,523,344	+				+0.5
3,523,363	-				-0.3
3,523,393	+				+0.3
3,523,393	+				+0.0
3,523,393	+				+2.7
3,523,394	-				+0.5
3,523,407	+				-1.6
3,523,451	+				+0.0
3,523,475	-				-1.2
3,523,506	-		OLJFJH_16680	0.12	-0.7
3,523,525	-		OLJFJH_16680	0.14	+0.1
3,523,525	-		OLJFJH_16680	0.14	-0.6
3,523,558	+		OLJFJH_16680	0.18	+0.3
3,523,559	-		OLJFJH_16680	0.18	+0.2
3,523,610	-		OLJFJH_16680	0.23	-2.1
3,523,610	-		OLJFJH_16680	0.23	+1.0
3,523,614	-		OLJFJH_16680	0.24	+1.1
3,523,636	-		OLJFJH_16680	0.26	-1.4
3,523,636	-		OLJFJH_16680	0.26	-2.2
3,523,688	+		OLJFJH_16680	0.32	-0.4
3,523,781	+		OLJFJH_16680	0.42	-1.7
3,523,812	-		OLJFJH_16680	0.45	+0.4
3,523,815	-		OLJFJH_16680	0.45	-2.5
3,523,966	+		OLJFJH_16680	0.62	+0.2
3,523,985	+		OLJFJH_16680	0.64	-1.5
3,523,986	-		OLJFJH_16680	0.64	+0.8
3,524,162	+		OLJFJH_16680	0.83	+1.2
3,524,163	-		OLJFJH_16680	0.83	-1.7
3,524,237	+				-0.9
3,524,248	+				+0.1
3,524,248	+				+1.1
3,524,280	+				+1.9
3,524,313	+				-1.9
3,524,314	-				-0.4
3,524,314	-				+1.2
3,524,314	-				-0.6
3,524,314	-				-0.3
3,524,317	-				-0.3