Strain Fitness in Erwinia amylovora T8 around OLJFJH_14225

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
3,003,177	+		OLJFJH_14215	0.34	-0.6
3,003,177	+		OLJFJH_14215	0.34	-1.9
3,003,177	+		OLJFJH_14215	0.34	+0.7
3,003,178	-		OLJFJH_14215	0.34	-0.2
3,003,178	-		OLJFJH_14215	0.34	-1.2
3,003,178	-		OLJFJH_14215	0.34	-0.6
3,003,348	+		OLJFJH_14215	0.74	-0.5
3,003,348	+		OLJFJH_14215	0.74	+2.2
3,003,349	-		OLJFJH_14215	0.74	-0.7
3,003,397	+		OLJFJH_14215	0.86	+1.4
3,003,471	+				-2.8
3,003,480	-				-0.0
3,003,496	-				-1.0
3,003,500	+				-1.8
3,003,500	+				+1.4
3,003,500	+				+0.2
3,003,501	-				-2.4
3,003,558	+		OLJFJH_14220	0.11	+0.6
3,003,597	-		OLJFJH_14220	0.20	-1.0
3,003,727	-		OLJFJH_14220	0.49	+0.3
3,003,904	+		OLJFJH_14220	0.89	+1.3
3,003,905	-		OLJFJH_14220	0.89	+0.7
3,003,909	+				-0.9
3,003,910	-				+0.5
3,004,025	+				+0.0
3,004,025	+				-3.2
3,004,191	-		OLJFJH_14225	0.23	-3.3
3,004,193	-		OLJFJH_14225	0.24	-0.1
3,004,193	-		OLJFJH_14225	0.24	-1.1
3,004,223	+		OLJFJH_14225	0.28	-1.2
3,004,344	+		OLJFJH_14225	0.47	-1.8
3,004,345	-		OLJFJH_14225	0.48	-0.9
3,004,391	+		OLJFJH_14225	0.55	+0.4
3,004,452	-		OLJFJH_14225	0.64	-1.6
3,004,676	+				-2.3
3,004,677	-				+1.9
3,004,703	+				+0.5
3,004,726	+				-1.1
3,004,799	+				+1.3
3,004,800	-				+1.6
3,004,997	+				-0.8
3,005,009	+				-1.1
3,005,010	-				-1.9
3,005,082	+		OLJFJH_14230	0.13	+0.6
3,005,086	+		OLJFJH_14230	0.14	-1.8
3,005,086	+		OLJFJH_14230	0.14	-1.1
3,005,086	+		OLJFJH_14230	0.14	+1.7
3,005,086	+		OLJFJH_14230	0.14	+0.5
3,005,087	-		OLJFJH_14230	0.14	+1.3
3,005,134	+		OLJFJH_14230	0.18	-1.7
3,005,134	+		OLJFJH_14230	0.18	-0.1
3,005,135	-		OLJFJH_14230	0.18	-0.4
3,005,135	-		OLJFJH_14230	0.18	+2.0
3,005,135	-		OLJFJH_14230	0.18	+1.5
3,005,144	-		OLJFJH_14230	0.19	+1.2
3,005,196	-		OLJFJH_14230	0.23	-1.7
3,005,572	+		OLJFJH_14230	0.56	+1.0
3,005,639	+		OLJFJH_14230	0.61	+0.4