Strain Fitness in Erwinia amylovora T8 around OLJFJH_14060

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
2,964,192	+		OLJFJH_14050	0.62	+0.9
2,964,210	+		OLJFJH_14050	0.64	+0.8
2,964,342	+		OLJFJH_14050	0.77	-1.7
2,964,343	-		OLJFJH_14050	0.77	+1.8
2,964,346	+		OLJFJH_14050	0.78	-0.2
2,964,346	+		OLJFJH_14050	0.78	+1.5
2,964,346	+		OLJFJH_14050	0.78	+0.6
2,964,346	+		OLJFJH_14050	0.78	+0.2
2,964,347	-		OLJFJH_14050	0.78	-2.7
2,964,397	+		OLJFJH_14050	0.83	-0.4
2,964,407	+		OLJFJH_14050	0.84	+2.5
2,964,528	-				-1.9
2,964,530	+				+0.6
2,964,530	+				+0.8
2,964,536	+				-2.6
2,964,537	-				+0.9
2,964,541	+				+0.5
2,964,541	+				-1.7
2,964,552	+				-0.3
2,964,552	+				-1.4
2,964,572	+				-0.4
2,964,634	+				-0.2
2,964,660	-				-1.7
2,964,714	-				+0.3
2,964,757	-				+2.7
2,964,757	-				-1.2
2,964,757	-				+0.7
2,964,842	+		OLJFJH_14055	0.24	+0.2
2,964,853	+		OLJFJH_14055	0.27	+1.7
2,964,883	-		OLJFJH_14055	0.33	-1.3
2,964,913	-		OLJFJH_14055	0.40	-0.7
2,964,915	+		OLJFJH_14055	0.41	-0.4
2,964,916	-		OLJFJH_14055	0.41	-0.1
2,965,114	-		OLJFJH_14055	0.85	-0.4
2,965,114	-		OLJFJH_14055	0.85	-2.1
2,965,131	-		OLJFJH_14055	0.89	+0.6
2,965,131	-		OLJFJH_14055	0.89	+0.3
2,965,176	+				-0.6
2,965,176	+				-0.4
2,965,176	+				-1.5
2,965,177	-				-0.3
2,965,177	-				-0.2
2,965,298	+		OLJFJH_14060	0.44	-2.2
2,965,298	+		OLJFJH_14060	0.44	-1.7
2,965,298	+		OLJFJH_14060	0.44	-0.7
2,965,299	-		OLJFJH_14060	0.45	-1.1
2,965,299	-		OLJFJH_14060	0.45	-1.3
2,965,299	-		OLJFJH_14060	0.45	-0.3
2,965,299	-		OLJFJH_14060	0.45	-1.6
2,965,338	-		OLJFJH_14060	0.59	+1.0
2,965,444	+				-1.7
2,965,634	-				-0.1
2,965,637	+				-0.5
2,965,638	-				-1.5
2,965,641	+				-0.5
2,965,909	-		OLJFJH_14065	0.18	-2.5
2,965,910	+		OLJFJH_14065	0.18	-0.8
2,965,961	-		OLJFJH_14065	0.23	-2.8
2,966,088	+		OLJFJH_14065	0.36	+0.6
2,966,142	+		OLJFJH_14065	0.41	-0.6
2,966,318	-		OLJFJH_14065	0.59	+0.7
2,966,422	-		OLJFJH_14065	0.69	+1.0
2,966,430	+		OLJFJH_14065	0.70	+4.2