Strain Fitness in Erwinia amylovora T8 around OLJFJH_13625

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
2,867,784	-				-1.0
2,868,644	+				+2.5
2,868,728	+				-0.5
2,868,728	+				+0.1
2,868,729	-				+1.0
2,868,729	-				+0.4
2,868,730	+				-1.0
2,868,810	+		OLJFJH_13625	0.12	+0.3
2,869,053	-		OLJFJH_13625	0.25	-0.2
2,869,095	+		OLJFJH_13625	0.27	-1.0
2,869,316	+		OLJFJH_13625	0.39	-0.8
2,869,402	-		OLJFJH_13625	0.44	-0.3
2,869,513	-		OLJFJH_13625	0.50	+0.0
2,869,639	-		OLJFJH_13625	0.56	+0.1
2,869,783	+		OLJFJH_13625	0.64	+1.2
2,869,783	+		OLJFJH_13625	0.64	-2.2
2,869,783	+		OLJFJH_13625	0.64	-2.0
2,869,784	-		OLJFJH_13625	0.64	-0.8
2,869,831	+		OLJFJH_13625	0.66	+0.4
2,869,839	-		OLJFJH_13625	0.67	+0.6
2,869,850	-		OLJFJH_13625	0.67	-1.0
2,869,854	-		OLJFJH_13625	0.68	-1.8
2,869,854	-		OLJFJH_13625	0.68	-0.1
2,869,854	-		OLJFJH_13625	0.68	-1.6
2,869,861	+		OLJFJH_13625	0.68	-0.1
2,869,862	-		OLJFJH_13625	0.68	-1.2
2,869,865	-		OLJFJH_13625	0.68	+2.5
2,869,871	+		OLJFJH_13625	0.69	-1.9
2,869,871	+		OLJFJH_13625	0.69	-0.8
2,869,897	-		OLJFJH_13625	0.70	-0.2
2,869,960	+		OLJFJH_13625	0.73	+0.3
2,869,961	-		OLJFJH_13625	0.73	-0.3
2,870,105	+		OLJFJH_13625	0.81	+0.2
2,870,188	+		OLJFJH_13625	0.85	-1.4
2,870,320	+				+0.2
2,870,321	-				+0.1
2,870,334	+				+2.1
2,870,334	+				+0.6
2,870,351	+				-0.8
2,870,482	+				+0.0
2,870,508	+				-0.4
2,870,512	+				+1.1
2,870,547	+				-1.1
2,870,547	+				+2.1
2,870,547	+				+0.6
2,870,574	-				-2.3
2,870,611	+				-1.5
2,870,613	+				+0.3
2,870,613	+				+0.3
2,870,614	-				+0.2
2,870,730	+				+1.4
2,871,045	+		OLJFJH_13630	0.34	-0.2
2,871,154	-		OLJFJH_13630	0.46	+1.2
2,871,195	-		OLJFJH_13630	0.50	-1.9
2,871,210	-		OLJFJH_13630	0.52	+0.2
2,871,285	+		OLJFJH_13630	0.60	-0.1
2,871,346	+		OLJFJH_13630	0.67	+1.5
2,871,358	+		OLJFJH_13630	0.68	-3.1
2,871,359	-		OLJFJH_13630	0.68	-0.8
2,871,423	-		OLJFJH_13630	0.75	+0.1
2,871,423	-		OLJFJH_13630	0.75	+1.2
2,871,449	+		OLJFJH_13630	0.78	+0.0
2,871,465	+		OLJFJH_13630	0.80	-0.6