Strain Fitness in Erwinia amylovora T8 around OLJFJH_10485

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
2,164,734	-		OLJFJH_10480	0.67	-1.7
2,164,967	+		OLJFJH_10480	0.76	+0.3
2,164,968	-		OLJFJH_10480	0.76	-0.4
2,164,968	-		OLJFJH_10480	0.76	-0.2
2,165,058	+		OLJFJH_10480	0.80	-2.1
2,165,058	+		OLJFJH_10480	0.80	+0.1
2,165,122	+		OLJFJH_10480	0.83	+0.4
2,165,122	+		OLJFJH_10480	0.83	-0.7
2,165,122	+		OLJFJH_10480	0.83	-1.3
2,165,123	-		OLJFJH_10480	0.83	-3.1
2,165,327	-				+0.3
2,165,345	+				+0.6
2,165,345	+				-0.5
2,165,345	+				-0.8
2,165,348	+				-2.9
2,165,348	+				+1.2
2,165,349	-				-1.1
2,165,365	+				+1.2
2,165,433	-				+0.7
2,165,433	-				-0.7
2,165,459	+				-2.4
2,165,459	+				-0.4
2,165,459	+				+0.2
2,165,459	+				+3.6
2,165,459	+				+0.5
2,165,459	+				-0.9
2,165,460	-				-0.5
2,165,460	-				+0.8
2,165,460	-				-0.6
2,165,510	+				-0.1
2,165,510	+				-3.4
2,165,510	+				-0.0
2,165,510	+				+0.1
2,165,510	+				-0.3
2,165,523	-				+3.0
2,165,538	-				+3.8
2,165,686	+		OLJFJH_10485	0.28	-0.3
2,165,686	+		OLJFJH_10485	0.28	-4.0
2,165,687	-		OLJFJH_10485	0.28	-0.4
2,165,687	-		OLJFJH_10485	0.28	-1.3
2,165,691	+		OLJFJH_10485	0.29	-3.2
2,165,691	+		OLJFJH_10485	0.29	+0.1
2,165,692	-		OLJFJH_10485	0.30	-2.0
2,165,692	-		OLJFJH_10485	0.30	-1.5
2,165,861	+		OLJFJH_10485	0.81	-3.8
2,165,925	-				-0.0
2,165,978	-				-3.6
2,166,123	+		OLJFJH_10490	0.20	+1.9
2,166,241	-		OLJFJH_10490	0.32	+1.1
2,166,351	+		OLJFJH_10490	0.43	-1.3
2,166,352	-		OLJFJH_10490	0.43	+0.2
2,166,352	-		OLJFJH_10490	0.43	+1.4
2,166,417	+		OLJFJH_10490	0.49	-0.2
2,166,417	+		OLJFJH_10490	0.49	+0.5
2,166,418	-		OLJFJH_10490	0.49	+0.6
2,166,421	+		OLJFJH_10490	0.49	-0.2
2,166,525	-		OLJFJH_10490	0.60	-3.0
2,166,660	+		OLJFJH_10490	0.73	-0.8
2,166,756	+		OLJFJH_10490	0.82	+0.3
2,166,910	-				+1.0
2,166,910	-				+0.2
2,166,910	-				-0.6
2,166,910	-				+0.1