Strain Fitness in Erwinia amylovora T8 around OLJFJH_09975

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
2,056,471	+				-3.3
2,056,472	-				+1.3
2,056,472	-				-1.2
2,056,666	+		OLJFJH_09970	0.24	+0.5
2,056,666	+		OLJFJH_09970	0.24	+1.2
2,056,666	+		OLJFJH_09970	0.24	+0.5
2,056,667	-		OLJFJH_09970	0.24	+1.0
2,056,667	-		OLJFJH_09970	0.24	+0.6
2,056,670	-		OLJFJH_09970	0.24	+0.9
2,056,784	+		OLJFJH_09970	0.39	-2.0
2,056,784	+		OLJFJH_09970	0.39	+0.0
2,056,821	+		OLJFJH_09970	0.44	+1.1
2,056,821	+		OLJFJH_09970	0.44	+0.9
2,056,822	-		OLJFJH_09970	0.44	-1.7
2,056,822	-		OLJFJH_09970	0.44	-2.0
2,056,908	-		OLJFJH_09970	0.56	-0.1
2,056,973	+		OLJFJH_09970	0.65	-0.8
2,057,060	+		OLJFJH_09970	0.76	+0.5
2,057,061	-		OLJFJH_09970	0.77	+1.6
2,057,226	+				+0.5
2,057,227	-				+0.7
2,057,227	-				-0.9
2,057,227	-				-0.5
2,057,232	+				-0.7
2,057,232	+				-0.3
2,057,232	+				-1.0
2,057,233	-				+0.1
2,057,470	-		OLJFJH_09975	0.84	-2.0
2,057,470	-		OLJFJH_09975	0.84	-1.2
2,057,471	+		OLJFJH_09975	0.84	-2.1
2,057,543	+				-1.5
2,057,543	+				+1.2
2,057,544	-				+1.8
2,057,544	-				+0.3
2,057,561	+				+0.2
2,057,562	-				-1.1
2,057,665	-		OLJFJH_09980	0.19	-2.0
2,057,671	-		OLJFJH_09980	0.20	+0.1
2,057,671	-		OLJFJH_09980	0.20	+0.5
2,057,712	-		OLJFJH_09980	0.26	-1.0
2,057,741	-		OLJFJH_09980	0.29	+2.8
2,058,104	-		OLJFJH_09980	0.76	-0.8
2,058,150	+		OLJFJH_09980	0.82	+0.3
2,058,205	+		OLJFJH_09980	0.89	+1.1
2,058,206	-		OLJFJH_09980	0.89	-0.3
2,058,253	-				+0.0
2,058,297	+				-0.5
2,058,298	-				-1.0
2,058,317	+				-1.4
2,058,331	+				+0.4
2,058,331	+				+0.0
2,058,332	-				-0.1
2,058,332	-				-0.5
2,058,335	-				+4.1
2,058,337	+				+0.8
2,058,437	-				+1.1
2,058,437	-				-0.4
2,058,464	+				-0.8
2,058,464	+				+1.1
2,058,464	+				-0.2
2,058,465	-				-1.5
2,058,466	+				-3.0
2,058,466	+				+0.4
2,058,466	+				+0.5