Strain Fitness in Erwinia amylovora T8 around OLJFJH_09330

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
1,932,301	+				-0.8
1,932,301	+				-1.8
1,932,301	+				-4.2
1,932,302	-				-1.1
1,932,302	-				-0.5
1,932,302	-				-0.9
1,932,347	+		OLJFJH_09325	0.11	-0.8
1,932,347	+		OLJFJH_09325	0.11	-0.8
1,932,347	+		OLJFJH_09325	0.11	-1.0
1,932,348	-		OLJFJH_09325	0.11	-0.8
1,932,348	-		OLJFJH_09325	0.11	-2.8
1,932,348	-		OLJFJH_09325	0.11	-1.2
1,932,465	-		OLJFJH_09325	0.24	-2.8
1,932,623	+		OLJFJH_09325	0.41	-0.6
1,932,623	+		OLJFJH_09325	0.41	-1.4
1,932,623	+		OLJFJH_09325	0.41	-1.9
1,932,623	+		OLJFJH_09325	0.41	-2.0
1,932,623	+		OLJFJH_09325	0.41	+1.2
1,932,624	-		OLJFJH_09325	0.41	-0.6
1,932,624	-		OLJFJH_09325	0.41	-0.9
1,932,624	-		OLJFJH_09325	0.41	-0.9
1,932,688	+		OLJFJH_09325	0.48	-0.8
1,932,688	+		OLJFJH_09325	0.48	-2.6
1,932,688	+		OLJFJH_09325	0.48	-0.7
1,932,688	+		OLJFJH_09325	0.48	+0.4
1,932,688	+		OLJFJH_09325	0.48	-1.0
1,932,689	-		OLJFJH_09325	0.49	+3.3
1,932,689	-		OLJFJH_09325	0.49	-3.1
1,932,758	+		OLJFJH_09325	0.56	-3.0
1,932,808	+		OLJFJH_09325	0.62	-1.6
1,932,809	-		OLJFJH_09325	0.62	-0.3
1,932,872	+		OLJFJH_09325	0.69	-1.6
1,932,873	-		OLJFJH_09325	0.69	-1.5
1,933,149	-				+0.2
1,933,155	-				+1.4
1,933,178	-				-1.4
1,933,328	+		OLJFJH_09330	0.11	-0.0
1,933,329	-		OLJFJH_09330	0.11	-0.8
1,933,467	-		OLJFJH_09330	0.21	-2.8
1,933,467	-		OLJFJH_09330	0.21	-0.0
1,933,523	+		OLJFJH_09330	0.25	-1.4
1,933,524	-		OLJFJH_09330	0.25	+0.4
1,933,624	+		OLJFJH_09330	0.32	-0.6
1,933,624	+		OLJFJH_09330	0.32	-1.4
1,933,625	-		OLJFJH_09330	0.32	-0.2
1,933,645	+		OLJFJH_09330	0.33	-0.6
1,933,689	-		OLJFJH_09330	0.37	-2.9
1,933,689	-		OLJFJH_09330	0.37	-1.1
1,933,689	-		OLJFJH_09330	0.37	-3.3
1,933,689	-		OLJFJH_09330	0.37	-1.4
1,933,713	+		OLJFJH_09330	0.38	-3.1
1,933,724	+		OLJFJH_09330	0.39	-1.7
1,933,833	-		OLJFJH_09330	0.47	+1.2
1,933,919	+		OLJFJH_09330	0.53	-0.6
1,933,919	+		OLJFJH_09330	0.53	-0.9
1,933,920	-		OLJFJH_09330	0.53	-0.2
1,933,920	-		OLJFJH_09330	0.53	-2.2
1,933,920	-		OLJFJH_09330	0.53	-2.0
1,934,300	-		OLJFJH_09330	0.79	+1.2
1,934,544	+				-0.5
1,934,594	+				-2.2
1,934,595	-				-4.0
1,934,595	-				-2.8
1,934,595	-				-3.6
1,934,595	-				-1.6
1,934,595	-				-1.4
1,934,595	-				-3.0
1,934,595	-				-2.0
1,934,598	-				-1.7
1,934,620	+		OLJFJH_09335	0.13	-1.9
1,934,620	+		OLJFJH_09335	0.13	-1.1
1,934,620	+		OLJFJH_09335	0.13	-1.3
1,934,620	+		OLJFJH_09335	0.13	-3.4
1,934,621	-		OLJFJH_09335	0.13	-1.9
1,934,621	-		OLJFJH_09335	0.13	-1.9
1,934,717	+		OLJFJH_09335	0.27	-0.5
1,934,776	-		OLJFJH_09335	0.36	-0.9
1,934,918	+		OLJFJH_09335	0.57	+1.2
1,934,918	+		OLJFJH_09335	0.57	-1.1
1,934,918	+		OLJFJH_09335	0.57	-4.1
1,934,919	-		OLJFJH_09335	0.57	-0.4
1,935,042	-		OLJFJH_09335	0.76	-3.3
1,935,042	-		OLJFJH_09335	0.76	+0.2
1,935,094	-		OLJFJH_09335	0.84	-0.7
1,935,116	+		OLJFJH_09335	0.87	+2.0
1,935,166	+				-1.6
1,935,167	-				-3.5
1,935,189	-				-1.7
1,935,189	-				-1.5
1,935,290	+				-0.7
1,935,290	+				+1.4
1,935,290	+				-1.4
1,935,290	+				+1.1
1,935,290	+				+2.6
1,935,290	+				-0.1
1,935,290	+				-3.0
1,935,291	-				+2.9
1,935,291	-				-1.5
1,935,291	-				-1.7
1,935,291	-				-0.3
1,935,291	-				+0.4
1,935,291	-				+0.1
1,935,291	-				-0.5
1,935,420	+		OLJFJH_09340	0.40	-1.0
1,935,420	+		OLJFJH_09340	0.40	+0.3
1,935,420	+		OLJFJH_09340	0.40	-3.0
1,935,421	-		OLJFJH_09340	0.40	-1.2
1,935,455	+		OLJFJH_09340	0.51	-1.1
1,935,455	+		OLJFJH_09340	0.51	+0.6
1,935,456	-		OLJFJH_09340	0.51	+1.0
1,935,479	-		OLJFJH_09340	0.58	+0.2
1,935,479	-		OLJFJH_09340	0.58	-0.3