Strain Fitness in Erwinia amylovora T8 around OLJFJH_08845

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
1,810,818	+		OLJFJH_08835	0.77	-2.1
1,810,930	+		OLJFJH_08835	0.89	-0.6
1,810,930	+		OLJFJH_08835	0.89	-1.8
1,810,931	-		OLJFJH_08835	0.89	+0.0
1,810,931	-		OLJFJH_08835	0.89	+0.6
1,810,934	-		OLJFJH_08835	0.89	+0.4
1,810,965	+				+0.9
1,810,965	+				-0.3
1,810,965	+				-1.1
1,810,966	-				+4.8
1,810,967	+				-0.3
1,810,967	+				-2.0
1,811,047	+				+1.2
1,811,047	+				-0.4
1,811,047	+				-1.1
1,811,047	+				+0.5
1,811,047	+				+1.6
1,811,047	+				+0.1
1,811,048	-				+0.8
1,811,048	-				-1.5
1,811,048	-				+0.5
1,811,049	+				+0.7
1,811,049	+				+0.4
1,811,067	+				-2.7
1,811,067	+				+0.9
1,811,067	+				+0.9
1,811,067	+				+0.3
1,811,068	-				+0.5
1,811,068	-				-1.1
1,811,068	-				+0.2
1,811,068	-				-0.9
1,811,068	-				-0.5
1,811,068	-				-1.5
1,811,084	+				+0.8
1,811,092	-				-1.8
1,811,101	-				+0.4
1,811,101	-				+0.4
1,811,104	-				-0.8
1,811,104	-				+2.2
1,811,146	+		OLJFJH_08840	0.10	-0.1
1,811,147	-		OLJFJH_08840	0.11	-0.5
1,811,175	+		OLJFJH_08840	0.15	+3.0
1,811,175	+		OLJFJH_08840	0.15	+0.6
1,811,176	-		OLJFJH_08840	0.15	-0.3
1,811,242	-		OLJFJH_08840	0.24	-0.6
1,811,242	-		OLJFJH_08840	0.24	+0.8
1,811,246	+		OLJFJH_08840	0.25	-0.8
1,811,246	+		OLJFJH_08840	0.25	+0.7
1,811,246	+		OLJFJH_08840	0.25	-1.7
1,811,247	-		OLJFJH_08840	0.25	+0.4
1,811,247	-		OLJFJH_08840	0.25	+0.2
1,811,289	-		OLJFJH_08840	0.31	+0.6
1,811,289	-		OLJFJH_08840	0.31	+0.6
1,811,375	+		OLJFJH_08840	0.43	-2.5
1,811,396	+		OLJFJH_08840	0.46	+1.8
1,811,397	-		OLJFJH_08840	0.46	+0.8
1,811,397	-		OLJFJH_08840	0.46	-1.3
1,811,420	-		OLJFJH_08840	0.49	+0.8
1,811,465	+		OLJFJH_08840	0.56	-1.9
1,811,645	+		OLJFJH_08840	0.81	+0.9
1,811,646	-		OLJFJH_08840	0.81	-2.7
1,811,647	+		OLJFJH_08840	0.82	+0.3
1,811,647	+		OLJFJH_08840	0.82	-0.9
1,811,647	+		OLJFJH_08840	0.82	+0.8
1,811,647	+		OLJFJH_08840	0.82	-1.5
1,811,647	+		OLJFJH_08840	0.82	+2.7
1,811,647	+		OLJFJH_08840	0.82	+0.9
1,811,648	-		OLJFJH_08840	0.82	-0.0
1,811,648	-		OLJFJH_08840	0.82	-0.1
1,811,648	-		OLJFJH_08840	0.82	+0.6
1,811,648	-		OLJFJH_08840	0.82	+2.0
1,811,648	-		OLJFJH_08840	0.82	+1.2
1,811,648	-		OLJFJH_08840	0.82	+1.6
1,811,648	-		OLJFJH_08840	0.82	+0.4
1,811,686	+		OLJFJH_08840	0.87	+1.6
1,811,790	+				-0.1
1,812,003	+		OLJFJH_08845	0.13	-0.1
1,812,003	+		OLJFJH_08845	0.13	+0.3
1,812,003	+		OLJFJH_08845	0.13	-1.2
1,812,004	-		OLJFJH_08845	0.13	-1.5
1,812,094	+		OLJFJH_08845	0.18	-1.4
1,812,124	+		OLJFJH_08845	0.20	-0.1
1,812,199	-		OLJFJH_08845	0.24	-1.2
1,812,240	+		OLJFJH_08845	0.27	-0.5
1,812,371	-		OLJFJH_08845	0.34	+0.7
1,812,414	-		OLJFJH_08845	0.37	-1.9
1,812,663	+		OLJFJH_08845	0.51	-0.5
1,812,663	+		OLJFJH_08845	0.51	-0.4
1,812,664	-		OLJFJH_08845	0.51	+0.0
1,812,664	-		OLJFJH_08845	0.51	+1.0
1,812,761	+		OLJFJH_08845	0.57	-0.1
1,812,762	-		OLJFJH_08845	0.57	-1.1
1,812,762	-		OLJFJH_08845	0.57	-0.2
1,812,847	+		OLJFJH_08845	0.62	+0.1
1,812,847	+		OLJFJH_08845	0.62	-1.5
1,812,848	-		OLJFJH_08845	0.62	-1.0
1,812,848	-		OLJFJH_08845	0.62	-0.5
1,812,848	-		OLJFJH_08845	0.62	+1.1
1,812,848	-		OLJFJH_08845	0.62	+1.4
1,812,848	-		OLJFJH_08845	0.62	-0.1
1,812,848	-		OLJFJH_08845	0.62	-1.2
1,812,848	-		OLJFJH_08845	0.62	-1.7
1,812,879	+		OLJFJH_08845	0.64	+0.4
1,812,987	+		OLJFJH_08845	0.70	-1.7
1,812,988	-		OLJFJH_08845	0.70	+0.7
1,813,278	+		OLJFJH_08845	0.87	+1.4
1,813,287	-		OLJFJH_08845	0.88	+0.4
1,813,622	+				+0.5
1,813,652	+				-0.5
1,813,652	+				-0.5
1,813,653	-				+0.7
1,813,653	-				+0.4
1,813,653	-				-1.1
1,813,715	+				-0.3
1,813,715	+				-0.0
1,813,737	+				-1.8
1,813,737	+				-0.5
1,813,739	+				+2.5
1,813,743	+				+0.3
1,813,743	+				+1.2
1,813,743	+				-1.6