Strain Fitness in Erwinia amylovora T8 around OLJFJH_05235

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
1,041,666	+		OLJFJH_05230	0.86	-0.5
1,041,685	+		OLJFJH_05230	0.88	-1.2
1,041,688	-		OLJFJH_05230	0.88	-0.3
1,041,688	-		OLJFJH_05230	0.88	-0.2
1,041,688	-		OLJFJH_05230	0.88	+5.1
1,041,809	-				-0.4
1,041,809	-				+0.1
1,041,809	-				+0.7
1,041,828	-				-0.9
1,041,859	+				+0.6
1,041,863	+				-3.1
1,041,864	-				-0.2
1,041,864	-				-0.9
1,041,903	-				+0.1
1,041,913	+				-1.8
1,041,917	-				-2.3
1,042,061	+				+1.1
1,042,195	+				-0.4
1,042,218	+				-2.5
1,042,368	+				-0.4
1,042,561	+				-1.7
1,042,561	+				-1.2
1,042,611	+				-2.8
1,042,612	-				-0.8
1,042,723	+		OLJFJH_05235	0.83	-2.3
1,042,761	+				+0.1
1,043,116	+		OLJFJH_05240	0.14	-0.6
1,043,261	+		OLJFJH_05240	0.25	-0.7
1,043,387	+		OLJFJH_05240	0.35	-0.7
1,043,388	-		OLJFJH_05240	0.35	+2.8
1,043,388	-		OLJFJH_05240	0.35	+0.5
1,043,388	-		OLJFJH_05240	0.35	+0.4
1,043,388	-		OLJFJH_05240	0.35	-1.1
1,043,389	+		OLJFJH_05240	0.35	-0.1
1,043,483	-		OLJFJH_05240	0.43	-1.2
1,043,509	+		OLJFJH_05240	0.45	-0.8
1,043,509	+		OLJFJH_05240	0.45	+0.3
1,043,514	-		OLJFJH_05240	0.46	+0.1
1,043,589	+		OLJFJH_05240	0.52	-0.8
1,043,589	+		OLJFJH_05240	0.52	-0.1
1,043,589	+		OLJFJH_05240	0.52	+0.7
1,043,589	+		OLJFJH_05240	0.52	+0.3
1,043,590	-		OLJFJH_05240	0.52	+2.8
1,043,590	-		OLJFJH_05240	0.52	-1.9
1,043,591	+		OLJFJH_05240	0.52	-1.8
1,043,591	+		OLJFJH_05240	0.52	-0.5
1,043,594	-		OLJFJH_05240	0.52	-0.4
1,043,642	-		OLJFJH_05240	0.56	-0.3