Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04905 and OLJFJH_04910 are separated by 336 nucleotides OLJFJH_04910 and OLJFJH_04915 are separated by 452 nucleotides
OLJFJH_04905: OLJFJH_04905 - GTP pyrophosphokinase, at 971,547 to 972,167
_04905
OLJFJH_04910: OLJFJH_04910 - hypothetical protein, at 972,504 to 972,752
_04910
OLJFJH_04915: OLJFJH_04915 - carbon-nitrogen hydrolase family protein, at 973,205 to 974,065
_04915
Position (kb) 972
973 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 971.504 kb on + strand at 971.552 kb on + strand at 971.552 kb on + strand at 971.552 kb on + strand at 971.552 kb on + strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.619 kb on + strand, within OLJFJH_04905 at 971.621 kb on + strand, within OLJFJH_04905 at 971.621 kb on + strand, within OLJFJH_04905 at 971.634 kb on + strand, within OLJFJH_04905 at 971.635 kb on - strand, within OLJFJH_04905 at 971.635 kb on - strand, within OLJFJH_04905 at 971.635 kb on - strand, within OLJFJH_04905 at 971.636 kb on + strand, within OLJFJH_04905 at 971.636 kb on + strand, within OLJFJH_04905 at 971.637 kb on - strand, within OLJFJH_04905 at 971.668 kb on + strand, within OLJFJH_04905 at 971.864 kb on + strand, within OLJFJH_04905 at 971.865 kb on - strand, within OLJFJH_04905 at 971.934 kb on - strand, within OLJFJH_04905 at 971.941 kb on - strand, within OLJFJH_04905 at 971.941 kb on - strand, within OLJFJH_04905 at 971.989 kb on + strand, within OLJFJH_04905 at 971.989 kb on + strand, within OLJFJH_04905 at 972.053 kb on + strand, within OLJFJH_04905 at 972.055 kb on + strand, within OLJFJH_04905 at 972.055 kb on + strand, within OLJFJH_04905 at 972.056 kb on - strand, within OLJFJH_04905 at 972.159 kb on + strand at 972.160 kb on - strand at 972.359 kb on + strand at 972.364 kb on + strand at 972.399 kb on + strand at 972.454 kb on + strand at 972.454 kb on + strand at 972.461 kb on + strand at 972.528 kb on + strand at 972.685 kb on + strand, within OLJFJH_04910 at 973.102 kb on + strand at 973.103 kb on - strand at 973.103 kb on - strand at 973.104 kb on + strand at 973.116 kb on - strand at 973.145 kb on + strand at 973.156 kb on - strand at 973.204 kb on + strand at 973.204 kb on + strand at 973.205 kb on - strand at 973.205 kb on - strand at 973.353 kb on + strand, within OLJFJH_04915 at 973.502 kb on - strand, within OLJFJH_04915 at 973.502 kb on - strand, within OLJFJH_04915 at 973.528 kb on + strand, within OLJFJH_04915 at 973.733 kb on + strand, within OLJFJH_04915 at 973.733 kb on + strand, within OLJFJH_04915
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5 remove 971,504 + +0.6 971,552 + -2.4 971,552 + +3.2 971,552 + -0.0 971,552 + -0.7 971,553 - -2.0 971,553 - +3.6 971,553 - -2.2 971,553 - -0.5 971,553 - +0.0 971,553 - -1.3 971,619 + OLJFJH_04905 0.12 +0.2 971,621 + OLJFJH_04905 0.12 +0.9 971,621 + OLJFJH_04905 0.12 +3.1 971,634 + OLJFJH_04905 0.14 +0.6 971,635 - OLJFJH_04905 0.14 +0.3 971,635 - OLJFJH_04905 0.14 -0.2 971,635 - OLJFJH_04905 0.14 -1.5 971,636 + OLJFJH_04905 0.14 -2.0 971,636 + OLJFJH_04905 0.14 -2.5 971,637 - OLJFJH_04905 0.14 +1.4 971,668 + OLJFJH_04905 0.19 +0.6 971,864 + OLJFJH_04905 0.51 -1.7 971,865 - OLJFJH_04905 0.51 -1.0 971,934 - OLJFJH_04905 0.62 -3.3 971,941 - OLJFJH_04905 0.63 +0.8 971,941 - OLJFJH_04905 0.63 -0.3 971,989 + OLJFJH_04905 0.71 +0.8 971,989 + OLJFJH_04905 0.71 -0.7 972,053 + OLJFJH_04905 0.81 +1.4 972,055 + OLJFJH_04905 0.82 -1.4 972,055 + OLJFJH_04905 0.82 -0.1 972,056 - OLJFJH_04905 0.82 +0.6 972,159 + +0.2 972,160 - +0.1 972,359 + -1.7 972,364 + -1.2 972,399 + +0.8 972,454 + +0.1 972,454 + +0.1 972,461 + -0.7 972,528 + -0.4 972,685 + OLJFJH_04910 0.73 -3.4 973,102 + +5.1 973,103 - -0.1 973,103 - +0.5 973,104 + +1.1 973,116 - -0.5 973,145 + -1.8 973,156 - -0.3 973,204 + +0.4 973,204 + -1.6 973,205 - +0.3 973,205 - -1.3 973,353 + OLJFJH_04915 0.17 -0.6 973,502 - OLJFJH_04915 0.34 +0.2 973,502 - OLJFJH_04915 0.34 +2.6 973,528 + OLJFJH_04915 0.38 -1.0 973,733 + OLJFJH_04915 0.61 -0.5 973,733 + OLJFJH_04915 0.61 +0.2
Or see this region's nucleotide sequence