Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03275 and OLJFJH_03280 are separated by 132 nucleotides OLJFJH_03280 and OLJFJH_03285 are separated by 620 nucleotides
OLJFJH_03275: OLJFJH_03275 - hypothetical protein, at 615,882 to 616,334
_03275
OLJFJH_03280: OLJFJH_03280 - acyltransferase, at 616,467 to 617,582
_03280
OLJFJH_03285: OLJFJH_03285 - alcohol dehydrogenase, at 618,203 to 619,519
_03285
Position (kb) 616
617
618 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 615.487 kb on + strand at 615.488 kb on - strand at 615.488 kb on - strand at 615.501 kb on - strand at 615.501 kb on - strand at 615.585 kb on - strand at 615.585 kb on - strand at 615.636 kb on + strand at 615.640 kb on + strand at 615.660 kb on + strand at 615.660 kb on + strand at 615.660 kb on + strand at 615.661 kb on - strand at 615.663 kb on - strand at 615.680 kb on - strand at 615.824 kb on + strand at 615.842 kb on + strand at 615.882 kb on - strand at 615.906 kb on - strand at 615.930 kb on + strand, within OLJFJH_03275 at 615.930 kb on + strand, within OLJFJH_03275 at 615.932 kb on + strand, within OLJFJH_03275 at 615.978 kb on - strand, within OLJFJH_03275 at 616.029 kb on - strand, within OLJFJH_03275 at 616.066 kb on + strand, within OLJFJH_03275 at 616.067 kb on - strand, within OLJFJH_03275 at 616.067 kb on - strand, within OLJFJH_03275 at 616.175 kb on - strand, within OLJFJH_03275 at 616.197 kb on + strand, within OLJFJH_03275 at 616.198 kb on - strand, within OLJFJH_03275 at 616.198 kb on - strand, within OLJFJH_03275 at 616.255 kb on + strand, within OLJFJH_03275 at 616.255 kb on + strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.273 kb on + strand, within OLJFJH_03275 at 616.305 kb on + strand at 616.305 kb on + strand at 616.305 kb on + strand at 616.305 kb on + strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.308 kb on - strand at 616.309 kb on + strand at 616.309 kb on + strand at 616.309 kb on + strand at 616.310 kb on - strand at 616.310 kb on - strand at 616.310 kb on - strand at 616.310 kb on - strand at 616.421 kb on - strand at 616.421 kb on - strand at 616.572 kb on + strand at 616.990 kb on - strand, within OLJFJH_03280 at 617.078 kb on + strand, within OLJFJH_03280 at 617.102 kb on + strand, within OLJFJH_03280 at 617.147 kb on - strand, within OLJFJH_03280 at 617.161 kb on - strand, within OLJFJH_03280 at 617.274 kb on + strand, within OLJFJH_03280 at 617.274 kb on + strand, within OLJFJH_03280 at 617.274 kb on + strand, within OLJFJH_03280 at 617.275 kb on - strand, within OLJFJH_03280 at 617.296 kb on - strand, within OLJFJH_03280 at 617.340 kb on + strand, within OLJFJH_03280 at 617.392 kb on + strand, within OLJFJH_03280 at 617.514 kb on + strand at 617.629 kb on + strand at 617.910 kb on - strand at 617.986 kb on + strand at 618.038 kb on + strand at 618.040 kb on + strand at 618.040 kb on + strand at 618.042 kb on + strand at 618.204 kb on + strand at 618.310 kb on + strand at 618.437 kb on + strand, within OLJFJH_03285 at 618.437 kb on + strand, within OLJFJH_03285 at 618.437 kb on + strand, within OLJFJH_03285 at 618.438 kb on - strand, within OLJFJH_03285 at 618.442 kb on + strand, within OLJFJH_03285 at 618.558 kb on + strand, within OLJFJH_03285 at 618.559 kb on - strand, within OLJFJH_03285
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5 remove 615,487 + -1.5 615,488 - +0.9 615,488 - -0.2 615,501 - -2.0 615,501 - +2.8 615,585 - +0.9 615,585 - +0.6 615,636 + +0.9 615,640 + +0.4 615,660 + +0.5 615,660 + +0.7 615,660 + +0.4 615,661 - -2.4 615,663 - -0.4 615,680 - -0.5 615,824 + -1.4 615,842 + -0.3 615,882 - +0.4 615,906 - -0.9 615,930 + OLJFJH_03275 0.11 -0.1 615,930 + OLJFJH_03275 0.11 -0.4 615,932 + OLJFJH_03275 0.11 +0.8 615,978 - OLJFJH_03275 0.21 -1.1 616,029 - OLJFJH_03275 0.32 -1.9 616,066 + OLJFJH_03275 0.41 -0.7 616,067 - OLJFJH_03275 0.41 +3.5 616,067 - OLJFJH_03275 0.41 +0.1 616,175 - OLJFJH_03275 0.65 -1.6 616,197 + OLJFJH_03275 0.70 -2.7 616,198 - OLJFJH_03275 0.70 -1.1 616,198 - OLJFJH_03275 0.70 -1.1 616,255 + OLJFJH_03275 0.82 -1.2 616,255 + OLJFJH_03275 0.82 -0.5 616,256 - OLJFJH_03275 0.83 -0.1 616,256 - OLJFJH_03275 0.83 -1.2 616,256 - OLJFJH_03275 0.83 -1.6 616,256 - OLJFJH_03275 0.83 +3.4 616,273 + OLJFJH_03275 0.86 +1.2 616,305 + -0.9 616,305 + -1.1 616,305 + +0.4 616,305 + -0.1 616,306 - +0.1 616,306 - -1.1 616,306 - -0.8 616,306 - +0.2 616,306 - -1.7 616,308 - -1.1 616,309 + +1.0 616,309 + -1.8 616,309 + +2.2 616,310 - -1.2 616,310 - -1.1 616,310 - -0.2 616,310 - +0.8 616,421 - -0.7 616,421 - -2.4 616,572 + +1.8 616,990 - OLJFJH_03280 0.47 +1.3 617,078 + OLJFJH_03280 0.55 -1.4 617,102 + OLJFJH_03280 0.57 +0.1 617,147 - OLJFJH_03280 0.61 -0.7 617,161 - OLJFJH_03280 0.62 +2.5 617,274 + OLJFJH_03280 0.72 +0.4 617,274 + OLJFJH_03280 0.72 +2.4 617,274 + OLJFJH_03280 0.72 +0.6 617,275 - OLJFJH_03280 0.72 -1.7 617,296 - OLJFJH_03280 0.74 +0.4 617,340 + OLJFJH_03280 0.78 +0.6 617,392 + OLJFJH_03280 0.83 +0.5 617,514 + -0.7 617,629 + -1.0 617,910 - -0.2 617,986 + -0.0 618,038 + +3.3 618,040 + +0.6 618,040 + -0.6 618,042 + -0.1 618,204 + -2.0 618,310 + +0.5 618,437 + OLJFJH_03285 0.18 -1.3 618,437 + OLJFJH_03285 0.18 -0.5 618,437 + OLJFJH_03285 0.18 +0.8 618,438 - OLJFJH_03285 0.18 -1.9 618,442 + OLJFJH_03285 0.18 -2.6 618,558 + OLJFJH_03285 0.27 -3.5 618,559 - OLJFJH_03285 0.27 +0.7
Or see this region's nucleotide sequence