Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02685 and OLJFJH_02695 are separated by 639 nucleotides OLJFJH_02695 and OLJFJH_02700 are separated by 114 nucleotides OLJFJH_02700 and OLJFJH_02705 are separated by 98 nucleotides
OLJFJH_02685: OLJFJH_02685 - hypothetical protein, at 487,925 to 488,260
_02685
OLJFJH_02695: OLJFJH_02695 - hypothetical protein, at 488,900 to 488,989
_02695
OLJFJH_02700: OLJFJH_02700 - recombinase family protein, at 489,104 to 489,724
_02700
OLJFJH_02705: OLJFJH_02705 - hypothetical protein, at 489,823 to 490,215
_02705
Position (kb) 488
489 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 488.017 kb on + strand, within OLJFJH_02685 at 488.018 kb on - strand, within OLJFJH_02685 at 488.018 kb on - strand, within OLJFJH_02685 at 488.022 kb on - strand, within OLJFJH_02685 at 488.035 kb on + strand, within OLJFJH_02685 at 488.037 kb on + strand, within OLJFJH_02685 at 488.037 kb on + strand, within OLJFJH_02685 at 488.037 kb on + strand, within OLJFJH_02685 at 488.038 kb on - strand, within OLJFJH_02685 at 488.038 kb on - strand, within OLJFJH_02685 at 488.041 kb on + strand, within OLJFJH_02685 at 488.041 kb on + strand, within OLJFJH_02685 at 488.042 kb on - strand, within OLJFJH_02685 at 488.043 kb on + strand, within OLJFJH_02685 at 488.044 kb on - strand, within OLJFJH_02685 at 488.044 kb on - strand, within OLJFJH_02685 at 488.131 kb on + strand, within OLJFJH_02685 at 488.187 kb on - strand, within OLJFJH_02685 at 488.241 kb on - strand at 488.245 kb on + strand at 488.263 kb on + strand at 488.264 kb on - strand at 488.307 kb on - strand at 488.307 kb on - strand at 488.328 kb on - strand at 488.632 kb on - strand at 488.634 kb on + strand at 488.664 kb on - strand at 488.671 kb on - strand at 488.694 kb on + strand at 488.695 kb on - strand at 488.695 kb on - strand at 488.702 kb on + strand at 488.709 kb on + strand at 488.710 kb on - strand at 488.789 kb on - strand at 488.789 kb on - strand at 488.840 kb on - strand at 488.844 kb on - strand at 488.844 kb on - strand at 488.845 kb on + strand at 488.913 kb on + strand, within OLJFJH_02695 at 488.925 kb on + strand, within OLJFJH_02695 at 489.134 kb on - strand at 489.202 kb on + strand, within OLJFJH_02700 at 489.295 kb on + strand, within OLJFJH_02700 at 489.391 kb on - strand, within OLJFJH_02700 at 489.416 kb on - strand, within OLJFJH_02700 at 489.417 kb on + strand, within OLJFJH_02700 at 489.418 kb on - strand, within OLJFJH_02700 at 489.454 kb on + strand, within OLJFJH_02700 at 489.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5 remove 488,017 + OLJFJH_02685 0.27 -0.5 488,018 - OLJFJH_02685 0.28 -0.2 488,018 - OLJFJH_02685 0.28 -0.9 488,022 - OLJFJH_02685 0.29 +0.4 488,035 + OLJFJH_02685 0.33 -0.1 488,037 + OLJFJH_02685 0.33 +2.0 488,037 + OLJFJH_02685 0.33 -0.1 488,037 + OLJFJH_02685 0.33 +0.3 488,038 - OLJFJH_02685 0.34 -1.6 488,038 - OLJFJH_02685 0.34 +0.8 488,041 + OLJFJH_02685 0.35 +2.4 488,041 + OLJFJH_02685 0.35 -1.0 488,042 - OLJFJH_02685 0.35 -0.1 488,043 + OLJFJH_02685 0.35 -1.1 488,044 - OLJFJH_02685 0.35 -1.4 488,044 - OLJFJH_02685 0.35 +0.5 488,131 + OLJFJH_02685 0.61 -1.1 488,187 - OLJFJH_02685 0.78 -1.1 488,241 - +0.4 488,245 + -0.8 488,263 + -1.6 488,264 - +0.5 488,307 - +0.2 488,307 - -0.3 488,328 - +0.4 488,632 - +0.0 488,634 + -2.5 488,664 - +4.1 488,671 - -0.2 488,694 + -2.3 488,695 - +1.4 488,695 - +2.2 488,702 + +1.3 488,709 + +0.2 488,710 - -0.1 488,789 - +0.7 488,789 - +0.1 488,840 - -2.1 488,844 - +0.8 488,844 - +0.6 488,845 + -0.9 488,913 + OLJFJH_02695 0.14 -1.4 488,925 + OLJFJH_02695 0.28 +0.8 489,134 - -1.0 489,202 + OLJFJH_02700 0.16 -1.2 489,295 + OLJFJH_02700 0.31 -0.4 489,391 - OLJFJH_02700 0.46 +0.2 489,416 - OLJFJH_02700 0.50 -1.4 489,417 + OLJFJH_02700 0.50 +0.4 489,418 - OLJFJH_02700 0.51 -1.5 489,454 + OLJFJH_02700 0.56 +0.7 489,859 - -1.7
Or see this region's nucleotide sequence