Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00710 and OLJFJH_00715 are separated by 338 nucleotides OLJFJH_00715 and OLJFJH_00720 are separated by 75 nucleotides OLJFJH_00720 and OLJFJH_00725 are separated by 34 nucleotides
OLJFJH_00710: OLJFJH_00710 - type II toxin-antitoxin system RelB/DinJ family antitoxin, at 58,457 to 58,684
_00710
OLJFJH_00715: OLJFJH_00715 - growth inhibitor PemK, at 59,023 to 59,292
_00715
OLJFJH_00720: OLJFJH_00720 - SMI1/KNR4 family protein, at 59,368 to 59,730
_00720
OLJFJH_00725: OLJFJH_00725 - RHS domain-containing protein, at 59,765 to 61,138
_00725
Position (kb) 59
60 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 58.170 kb on - strand at 58.241 kb on - strand at 58.242 kb on + strand at 58.279 kb on + strand at 58.460 kb on + strand at 58.460 kb on + strand at 58.461 kb on - strand at 58.482 kb on - strand, within OLJFJH_00710 at 58.482 kb on - strand, within OLJFJH_00710 at 58.547 kb on + strand, within OLJFJH_00710 at 58.547 kb on + strand, within OLJFJH_00710 at 58.547 kb on + strand, within OLJFJH_00710 at 58.547 kb on + strand, within OLJFJH_00710 at 58.548 kb on - strand, within OLJFJH_00710 at 58.586 kb on + strand, within OLJFJH_00710 at 58.587 kb on - strand, within OLJFJH_00710 at 58.588 kb on + strand, within OLJFJH_00710 at 58.588 kb on + strand, within OLJFJH_00710 at 58.589 kb on - strand, within OLJFJH_00710 at 58.589 kb on - strand, within OLJFJH_00710 at 58.590 kb on + strand, within OLJFJH_00710 at 58.590 kb on + strand, within OLJFJH_00710 at 58.590 kb on + strand, within OLJFJH_00710 at 58.590 kb on + strand, within OLJFJH_00710 at 58.590 kb on + strand, within OLJFJH_00710 at 58.590 kb on + strand, within OLJFJH_00710 at 58.591 kb on - strand, within OLJFJH_00710 at 58.591 kb on - strand, within OLJFJH_00710 at 58.625 kb on + strand, within OLJFJH_00710 at 58.626 kb on - strand, within OLJFJH_00710 at 58.743 kb on + strand at 59.232 kb on + strand, within OLJFJH_00715 at 59.309 kb on - strand at 59.309 kb on - strand at 59.347 kb on - strand at 59.355 kb on + strand at 59.356 kb on - strand at 59.360 kb on - strand at 59.388 kb on + strand at 59.394 kb on + strand at 59.438 kb on - strand, within OLJFJH_00720 at 59.442 kb on + strand, within OLJFJH_00720 at 59.481 kb on - strand, within OLJFJH_00720 at 59.534 kb on - strand, within OLJFJH_00720 at 59.540 kb on + strand, within OLJFJH_00720 at 59.541 kb on - strand, within OLJFJH_00720 at 59.576 kb on + strand, within OLJFJH_00720 at 59.589 kb on + strand, within OLJFJH_00720 at 59.857 kb on + strand at 59.963 kb on - strand, within OLJFJH_00725 at 59.965 kb on + strand, within OLJFJH_00725 at 60.113 kb on + strand, within OLJFJH_00725 at 60.155 kb on + strand, within OLJFJH_00725 at 60.155 kb on + strand, within OLJFJH_00725 at 60.156 kb on - strand, within OLJFJH_00725 at 60.156 kb on - strand, within OLJFJH_00725 at 60.156 kb on - strand, within OLJFJH_00725
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-5 remove 58,170 - +2.3 58,241 - -2.0 58,242 + +0.2 58,279 + -0.7 58,460 + +0.1 58,460 + -1.7 58,461 - -1.5 58,482 - OLJFJH_00710 0.11 +2.0 58,482 - OLJFJH_00710 0.11 +1.4 58,547 + OLJFJH_00710 0.39 +0.5 58,547 + OLJFJH_00710 0.39 +2.0 58,547 + OLJFJH_00710 0.39 +0.6 58,547 + OLJFJH_00710 0.39 -0.5 58,548 - OLJFJH_00710 0.40 +1.5 58,586 + OLJFJH_00710 0.57 +1.2 58,587 - OLJFJH_00710 0.57 +0.3 58,588 + OLJFJH_00710 0.57 +0.8 58,588 + OLJFJH_00710 0.57 -0.1 58,589 - OLJFJH_00710 0.58 -2.8 58,589 - OLJFJH_00710 0.58 -0.5 58,590 + OLJFJH_00710 0.58 -0.8 58,590 + OLJFJH_00710 0.58 -0.6 58,590 + OLJFJH_00710 0.58 -0.3 58,590 + OLJFJH_00710 0.58 +0.6 58,590 + OLJFJH_00710 0.58 -0.8 58,590 + OLJFJH_00710 0.58 +1.7 58,591 - OLJFJH_00710 0.59 +3.0 58,591 - OLJFJH_00710 0.59 -0.4 58,625 + OLJFJH_00710 0.74 +0.2 58,626 - OLJFJH_00710 0.74 +0.1 58,743 + -0.8 59,232 + OLJFJH_00715 0.77 -2.9 59,309 - +0.4 59,309 - -2.5 59,347 - -1.0 59,355 + +0.2 59,356 - -0.7 59,360 - -0.2 59,388 + +0.7 59,394 + +0.5 59,438 - OLJFJH_00720 0.19 -0.6 59,442 + OLJFJH_00720 0.20 +1.7 59,481 - OLJFJH_00720 0.31 -1.3 59,534 - OLJFJH_00720 0.46 +1.4 59,540 + OLJFJH_00720 0.47 -0.5 59,541 - OLJFJH_00720 0.48 +0.8 59,576 + OLJFJH_00720 0.57 +0.1 59,589 + OLJFJH_00720 0.61 -0.2 59,857 + -2.5 59,963 - OLJFJH_00725 0.14 +1.5 59,965 + OLJFJH_00725 0.15 +0.0 60,113 + OLJFJH_00725 0.25 +0.2 60,155 + OLJFJH_00725 0.28 -1.8 60,155 + OLJFJH_00725 0.28 -0.6 60,156 - OLJFJH_00725 0.28 -0.4 60,156 - OLJFJH_00725 0.28 -1.7 60,156 - OLJFJH_00725 0.28 -1.2
Or see this region's nucleotide sequence