Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10785 and A4249_RS10790 overlap by 4 nucleotides A4249_RS10790 and A4249_RS16965 are separated by 65 nucleotides A4249_RS16965 and A4249_RS10800 are separated by 284 nucleotides
A4249_RS10785: A4249_RS10785 - hypothetical protein, at 2,165,528 to 2,165,929
_RS10785
A4249_RS10790: A4249_RS10790 - RNA polymerase sigma factor, at 2,165,926 to 2,166,498
_RS10790
A4249_RS16965: A4249_RS16965 - hypothetical protein, at 2,166,564 to 2,166,968
_RS16965
A4249_RS10800: A4249_RS10800 - bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase, at 2,167,253 to 2,170,179
_RS10800
Position (kb)
2166
2167 Strain fitness (log2 ratio)
-1
0
1 at 2165.676 kb on + strand, within A4249_RS10785 at 2165.676 kb on + strand, within A4249_RS10785 at 2165.677 kb on - strand, within A4249_RS10785 at 2165.943 kb on + strand at 2165.943 kb on + strand at 2165.943 kb on + strand at 2165.944 kb on - strand at 2165.944 kb on - strand at 2165.944 kb on - strand at 2165.944 kb on - strand at 2166.022 kb on + strand, within A4249_RS10790 at 2166.022 kb on + strand, within A4249_RS10790 at 2166.023 kb on - strand, within A4249_RS10790 at 2166.023 kb on - strand, within A4249_RS10790 at 2166.023 kb on - strand, within A4249_RS10790 at 2166.055 kb on - strand, within A4249_RS10790 at 2166.072 kb on - strand, within A4249_RS10790 at 2166.242 kb on + strand, within A4249_RS10790 at 2166.242 kb on + strand, within A4249_RS10790 at 2166.242 kb on + strand, within A4249_RS10790 at 2166.243 kb on - strand, within A4249_RS10790 at 2166.565 kb on + strand at 2166.565 kb on + strand at 2166.565 kb on + strand at 2166.565 kb on + strand at 2166.565 kb on + strand at 2166.566 kb on - strand at 2166.566 kb on - strand at 2166.600 kb on + strand at 2166.601 kb on - strand at 2167.837 kb on + strand, within A4249_RS10800 at 2167.931 kb on + strand, within A4249_RS10800
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 2,165,676 + A4249_RS10785 0.37 -0.6 2,165,676 + A4249_RS10785 0.37 +0.7 2,165,677 - A4249_RS10785 0.37 +1.2 2,165,943 + -1.3 2,165,943 + +0.9 2,165,943 + +1.1 2,165,944 - -0.1 2,165,944 - -1.6 2,165,944 - -0.6 2,165,944 - -0.0 2,166,022 + A4249_RS10790 0.17 +1.5 2,166,022 + A4249_RS10790 0.17 +0.4 2,166,023 - A4249_RS10790 0.17 +0.1 2,166,023 - A4249_RS10790 0.17 -0.2 2,166,023 - A4249_RS10790 0.17 -0.4 2,166,055 - A4249_RS10790 0.23 +0.4 2,166,072 - A4249_RS10790 0.25 -1.1 2,166,242 + A4249_RS10790 0.55 +1.3 2,166,242 + A4249_RS10790 0.55 -0.6 2,166,242 + A4249_RS10790 0.55 +0.6 2,166,243 - A4249_RS10790 0.55 +0.1 2,166,565 + -1.2 2,166,565 + -0.4 2,166,565 + -0.6 2,166,565 + -0.3 2,166,565 + -0.1 2,166,566 - -0.2 2,166,566 - -0.1 2,166,600 + -0.6 2,166,601 - -0.4 2,167,837 + A4249_RS10800 0.20 +0.5 2,167,931 + A4249_RS10800 0.23 +0.8
Or see this region's nucleotide sequence