Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15635

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
3,162,392	+		A4249_RS15630	0.75	-0.7
3,162,392	+		A4249_RS15630	0.75	-0.3
3,162,393	-		A4249_RS15630	0.75	-1.7
3,162,393	-		A4249_RS15630	0.75	-0.3
3,162,531	+		A4249_RS15630	0.81	-0.1
3,162,531	+		A4249_RS15630	0.81	-0.1
3,162,531	+		A4249_RS15630	0.81	-2.4
3,162,531	+		A4249_RS15630	0.81	-0.4
3,162,531	+		A4249_RS15630	0.81	-1.0
3,162,531	+		A4249_RS15630	0.81	+1.7
3,162,531	+		A4249_RS15630	0.81	-0.9
3,162,531	+		A4249_RS15630	0.81	-0.9
3,162,531	+		A4249_RS15630	0.81	+0.7
3,162,531	+		A4249_RS15630	0.81	+0.2
3,162,531	+		A4249_RS15630	0.81	-0.4
3,162,531	+		A4249_RS15630	0.81	-0.2
3,162,531	+		A4249_RS15630	0.81	+1.5
3,162,532	-		A4249_RS15630	0.81	-0.8
3,162,532	-		A4249_RS15630	0.81	-1.3
3,162,532	-		A4249_RS15630	0.81	-0.7
3,162,532	-		A4249_RS15630	0.81	+0.1
3,162,532	-		A4249_RS15630	0.81	+1.5
3,162,532	-		A4249_RS15630	0.81	+1.2
3,162,532	-		A4249_RS15630	0.81	-0.9
3,162,532	-		A4249_RS15630	0.81	+0.1
3,162,728	+		A4249_RS15630	0.88	-0.2
3,162,728	+		A4249_RS15630	0.88	+1.7
3,162,729	-		A4249_RS15630	0.88	+0.3
3,162,789	+				-0.2
3,162,789	+				+1.3
3,162,790	-				-0.5
3,162,790	-				+1.5
3,162,790	-				+0.8
3,162,790	-				+0.3
3,163,005	+				-0.6
3,163,005	+				-2.1
3,163,005	+				-0.6
3,163,005	+				+0.6
3,163,005	+				+1.2
3,163,005	+				-0.1
3,163,005	+				-1.8
3,163,005	+				+0.3
3,163,006	-				-0.3
3,163,006	-				-0.8
3,163,006	-				+1.2
3,163,006	-				+0.3
3,163,006	-				+0.2
3,163,006	-				-1.1
3,163,006	-				-1.7
3,163,006	-				+0.7
3,163,060	+				+0.1
3,163,061	-				-0.0
3,163,207	+		A4249_RS15635	0.16	-0.3
3,163,287	+		A4249_RS15635	0.30	-0.5
3,163,287	+		A4249_RS15635	0.30	-1.7
3,163,288	-		A4249_RS15635	0.30	+0.5
3,163,288	-		A4249_RS15635	0.30	+0.8
3,163,458	+		A4249_RS15635	0.60	-1.0
3,163,459	-		A4249_RS15635	0.60	-1.2
3,163,494	+		A4249_RS15635	0.66	-0.5
3,163,494	+		A4249_RS15635	0.66	-0.6
3,163,494	+		A4249_RS15635	0.66	-0.9
3,163,494	+		A4249_RS15635	0.66	+0.4
3,163,494	+		A4249_RS15635	0.66	-1.2
3,163,495	-		A4249_RS15635	0.66	-0.6
3,163,495	-		A4249_RS15635	0.66	-0.5
3,163,495	-		A4249_RS15635	0.66	+0.7
3,163,624	-		A4249_RS15635	0.88	+0.9
3,163,725	+				-1.3
3,163,725	+				-2.0
3,163,741	+				+0.2
3,163,741	+				-0.9
3,163,741	+				+0.3
3,163,741	+				-0.4
3,163,742	-				+0.0
3,163,742	-				-0.1
3,163,742	-				-0.1
3,163,777	+		A4249_RS15640	0.11	-1.0
3,163,813	+		A4249_RS15640	0.16	-0.3
3,163,840	+		A4249_RS15640	0.19	+1.1
3,163,840	+		A4249_RS15640	0.19	+0.4
3,163,840	+		A4249_RS15640	0.19	-0.5
3,163,840	+		A4249_RS15640	0.19	+1.5
3,163,841	-		A4249_RS15640	0.20	-0.1
3,163,841	-		A4249_RS15640	0.20	+0.5
3,163,841	-		A4249_RS15640	0.20	+0.4
3,163,930	+		A4249_RS15640	0.32	-1.7
3,163,930	+		A4249_RS15640	0.32	+0.9
3,163,930	+		A4249_RS15640	0.32	-0.1
3,163,930	+		A4249_RS15640	0.32	-0.2
3,163,930	+		A4249_RS15640	0.32	+0.4
3,163,931	-		A4249_RS15640	0.32	-1.5
3,163,931	-		A4249_RS15640	0.32	+0.4
3,163,931	-		A4249_RS15640	0.32	-0.0
3,163,931	-		A4249_RS15640	0.32	+0.1
3,163,972	+		A4249_RS15640	0.38	-2.0
3,163,972	+		A4249_RS15640	0.38	-1.1
3,163,972	+		A4249_RS15640	0.38	-0.5
3,163,973	-		A4249_RS15640	0.38	+1.0
3,163,973	-		A4249_RS15640	0.38	-1.8
3,163,975	+		A4249_RS15640	0.38	-0.2
3,163,975	+		A4249_RS15640	0.38	-0.4
3,163,975	+		A4249_RS15640	0.38	+0.2
3,163,975	+		A4249_RS15640	0.38	-0.4
3,163,976	-		A4249_RS15640	0.38	-0.6
3,163,976	-		A4249_RS15640	0.38	-1.4
3,163,976	-		A4249_RS15640	0.38	-1.0
3,164,038	+		A4249_RS15640	0.47	+0.3
3,164,038	+		A4249_RS15640	0.47	+0.3
3,164,038	+		A4249_RS15640	0.47	+1.0
3,164,038	+		A4249_RS15640	0.47	+1.3
3,164,038	+		A4249_RS15640	0.47	-1.3
3,164,038	+		A4249_RS15640	0.47	-0.4
3,164,038	+		A4249_RS15640	0.47	-0.4
3,164,038	+		A4249_RS15640	0.47	-0.2
3,164,038	+		A4249_RS15640	0.47	-1.1
3,164,038	+		A4249_RS15640	0.47	+0.0
3,164,038	+		A4249_RS15640	0.47	-1.3
3,164,038	+		A4249_RS15640	0.47	+0.2
3,164,038	+		A4249_RS15640	0.47	+0.6
3,164,038	+		A4249_RS15640	0.47	-0.3
3,164,039	-		A4249_RS15640	0.47	+0.7
3,164,039	-		A4249_RS15640	0.47	-1.6
3,164,039	-		A4249_RS15640	0.47	-0.4
3,164,039	-		A4249_RS15640	0.47	+1.3
3,164,039	-		A4249_RS15640	0.47	-0.6
3,164,039	-		A4249_RS15640	0.47	+0.3
3,164,039	-		A4249_RS15640	0.47	+2.6
3,164,039	-		A4249_RS15640	0.47	+0.2
3,164,044	+		A4249_RS15640	0.48	-1.1
3,164,044	+		A4249_RS15640	0.48	+1.1
3,164,044	+		A4249_RS15640	0.48	-1.3
3,164,045	-		A4249_RS15640	0.48	-0.1
3,164,045	-		A4249_RS15640	0.48	+0.2
3,164,045	-		A4249_RS15640	0.48	+0.1
3,164,071	+		A4249_RS15640	0.52	+0.9
3,164,072	-		A4249_RS15640	0.52	-0.2
3,164,077	+		A4249_RS15640	0.52	-1.1
3,164,078	-		A4249_RS15640	0.53	-0.2
3,164,078	-		A4249_RS15640	0.53	+0.7
3,164,078	-		A4249_RS15640	0.53	-0.6
3,164,134	+		A4249_RS15640	0.60	+0.7
3,164,134	+		A4249_RS15640	0.60	+0.5
3,164,134	+		A4249_RS15640	0.60	+0.1
3,164,134	+		A4249_RS15640	0.60	+0.3
3,164,134	+		A4249_RS15640	0.60	-2.5
3,164,135	-		A4249_RS15640	0.61	-0.7
3,164,197	+		A4249_RS15640	0.69	+0.1
3,164,197	+		A4249_RS15640	0.69	-0.8
3,164,198	-		A4249_RS15640	0.69	-0.1
3,164,198	-		A4249_RS15640	0.69	+0.7
3,164,275	+		A4249_RS15640	0.80	+0.8
3,164,275	+		A4249_RS15640	0.80	+1.0
3,164,275	+		A4249_RS15640	0.80	+1.7
3,164,275	+		A4249_RS15640	0.80	-1.5
3,164,275	+		A4249_RS15640	0.80	-0.3
3,164,275	+		A4249_RS15640	0.80	+1.8
3,164,275	+		A4249_RS15640	0.80	-0.8
3,164,276	-		A4249_RS15640	0.80	+0.1
3,164,276	-		A4249_RS15640	0.80	-0.5
3,164,276	-		A4249_RS15640	0.80	+0.5
3,164,276	-		A4249_RS15640	0.80	+1.3
3,164,276	-		A4249_RS15640	0.80	-0.6
3,164,276	-		A4249_RS15640	0.80	-2.0
3,164,276	-		A4249_RS15640	0.80	+0.3
3,164,276	-		A4249_RS15640	0.80	+0.1
3,164,276	-		A4249_RS15640	0.80	+0.4
3,164,276	-		A4249_RS15640	0.80	+0.1
3,164,331	+		A4249_RS15640	0.88	-0.3
3,164,331	+		A4249_RS15640	0.88	-0.1
3,164,331	+		A4249_RS15640	0.88	+0.5
3,164,331	+		A4249_RS15640	0.88	-1.1
3,164,331	+		A4249_RS15640	0.88	-0.7
3,164,332	-		A4249_RS15640	0.88	+1.7
3,164,332	-		A4249_RS15640	0.88	-2.5
3,164,411	+				-1.0
3,164,411	+				+0.0
3,164,411	+				-0.0
3,164,411	+				-0.3
3,164,411	+				-0.7
3,164,411	+				+0.2
3,164,412	-				-0.2
3,164,412	-				+0.4
3,164,412	-				+0.8
3,164,412	-				+0.3
3,164,412	-				+0.3
3,164,644	+				+0.2