Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15620

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
3,157,972	-				+1.1
3,157,979	-				+0.9
3,158,190	+				+0.3
3,158,190	+				-0.7
3,158,190	+				-0.7
3,158,191	-				-1.7
3,158,191	-				+0.7
3,158,191	-				-1.4
3,158,191	-				+0.1
3,158,257	-		A4249_RS15615	0.13	-0.1
3,158,311	+		A4249_RS15615	0.23	+0.1
3,158,311	+		A4249_RS15615	0.23	+0.1
3,158,311	+		A4249_RS15615	0.23	-1.4
3,158,311	+		A4249_RS15615	0.23	-0.0
3,158,311	+		A4249_RS15615	0.23	-1.3
3,158,312	-		A4249_RS15615	0.23	-0.1
3,158,312	-		A4249_RS15615	0.23	+0.5
3,158,312	-		A4249_RS15615	0.23	+2.1
3,158,312	-		A4249_RS15615	0.23	-1.4
3,158,312	-		A4249_RS15615	0.23	-0.9
3,158,312	-		A4249_RS15615	0.23	-0.6
3,158,312	-		A4249_RS15615	0.23	-0.8
3,158,316	+		A4249_RS15615	0.24	+0.4
3,158,469	+		A4249_RS15615	0.53	-0.9
3,158,504	+		A4249_RS15615	0.59	-0.4
3,158,504	+		A4249_RS15615	0.59	-0.5
3,158,505	-		A4249_RS15615	0.60	+0.7
3,158,600	+		A4249_RS15615	0.77	+0.5
3,158,600	+		A4249_RS15615	0.77	-0.0
3,158,600	+		A4249_RS15615	0.77	-0.1
3,158,601	-		A4249_RS15615	0.78	-0.0
3,158,601	-		A4249_RS15615	0.78	-0.6
3,158,601	-		A4249_RS15615	0.78	-1.5
3,158,601	-		A4249_RS15615	0.78	-0.3
3,158,601	-		A4249_RS15615	0.78	-0.6
3,158,601	-		A4249_RS15615	0.78	-1.2
3,158,601	-		A4249_RS15615	0.78	+0.0
3,158,601	-		A4249_RS15615	0.78	-0.8
3,158,601	-		A4249_RS15615	0.78	+0.7
3,158,601	-		A4249_RS15615	0.78	-0.3
3,158,601	-		A4249_RS15615	0.78	+0.1
3,158,601	-		A4249_RS15615	0.78	-0.3
3,158,601	-		A4249_RS15615	0.78	+1.1
3,158,601	-		A4249_RS15615	0.78	-0.7
3,158,819	+		A4249_RS15620	0.10	+0.7
3,158,819	+		A4249_RS15620	0.10	-0.6
3,158,819	+		A4249_RS15620	0.10	+0.2
3,158,820	-		A4249_RS15620	0.10	+0.6
3,158,820	-		A4249_RS15620	0.10	+0.6
3,158,820	-		A4249_RS15620	0.10	-0.1
3,158,876	+		A4249_RS15620	0.16	+1.7
3,158,876	+		A4249_RS15620	0.16	+0.4
3,158,876	+		A4249_RS15620	0.16	-0.7
3,158,876	+		A4249_RS15620	0.16	+0.2
3,158,876	+		A4249_RS15620	0.16	-0.5
3,158,876	+		A4249_RS15620	0.16	-1.5
3,158,876	+		A4249_RS15620	0.16	-0.6
3,158,876	+		A4249_RS15620	0.16	+0.3
3,158,876	+		A4249_RS15620	0.16	+0.4
3,158,877	-		A4249_RS15620	0.16	-0.7
3,158,877	-		A4249_RS15620	0.16	+1.8
3,158,877	-		A4249_RS15620	0.16	-0.6
3,158,877	-		A4249_RS15620	0.16	+2.1
3,158,877	-		A4249_RS15620	0.16	-1.0
3,158,877	-		A4249_RS15620	0.16	+0.0
3,158,877	-		A4249_RS15620	0.16	-0.4
3,158,877	-		A4249_RS15620	0.16	+0.1
3,158,960	+		A4249_RS15620	0.25	-0.5
3,158,960	+		A4249_RS15620	0.25	-1.6
3,158,960	+		A4249_RS15620	0.25	+0.7
3,158,961	-		A4249_RS15620	0.25	-0.2
3,158,961	-		A4249_RS15620	0.25	-2.0
3,159,026	+		A4249_RS15620	0.32	+0.7
3,159,026	+		A4249_RS15620	0.32	-0.7
3,159,026	+		A4249_RS15620	0.32	-0.7
3,159,026	+		A4249_RS15620	0.32	+0.7
3,159,026	+		A4249_RS15620	0.32	+0.6
3,159,026	+		A4249_RS15620	0.32	+1.4
3,159,027	-		A4249_RS15620	0.32	-1.7
3,159,027	-		A4249_RS15620	0.32	+0.7
3,159,027	-		A4249_RS15620	0.32	+0.1
3,159,027	-		A4249_RS15620	0.32	-1.6
3,159,027	-		A4249_RS15620	0.32	-2.0
3,159,060	+		A4249_RS15620	0.36	+0.3
3,159,060	+		A4249_RS15620	0.36	+1.3
3,159,061	-		A4249_RS15620	0.36	+0.2
3,159,064	+		A4249_RS15620	0.36	+0.2
3,159,064	+		A4249_RS15620	0.36	-0.9
3,159,064	+		A4249_RS15620	0.36	+0.1
3,159,064	+		A4249_RS15620	0.36	-1.0
3,159,065	-		A4249_RS15620	0.36	+0.3
3,159,065	-		A4249_RS15620	0.36	-0.4
3,159,065	-		A4249_RS15620	0.36	+0.2
3,159,065	-		A4249_RS15620	0.36	+0.1
3,159,065	-		A4249_RS15620	0.36	+0.6
3,159,082	-		A4249_RS15620	0.38	-0.4
3,159,082	-		A4249_RS15620	0.38	+0.3
3,159,082	-		A4249_RS15620	0.38	+0.9
3,159,213	+		A4249_RS15620	0.52	-0.5
3,159,461	+		A4249_RS15620	0.78	+0.2
3,159,461	+		A4249_RS15620	0.78	-0.2
3,159,461	+		A4249_RS15620	0.78	+0.5
3,159,461	+		A4249_RS15620	0.78	-1.3
3,159,462	-		A4249_RS15620	0.79	-1.5
3,159,462	-		A4249_RS15620	0.79	-1.2
3,159,475	+		A4249_RS15620	0.80	-1.6
3,159,475	+		A4249_RS15620	0.80	-0.6
3,159,476	-		A4249_RS15620	0.80	-1.6
3,159,476	-		A4249_RS15620	0.80	-0.7
3,159,476	-		A4249_RS15620	0.80	+0.8
3,159,476	-		A4249_RS15620	0.80	-0.4
3,159,476	-		A4249_RS15620	0.80	-0.7
3,159,476	-		A4249_RS15620	0.80	+0.5
3,159,494	+		A4249_RS15620	0.82	-0.6
3,159,494	+		A4249_RS15620	0.82	-0.8
3,159,494	+		A4249_RS15620	0.82	-0.4
3,159,495	-		A4249_RS15620	0.82	-0.7
3,159,495	-		A4249_RS15620	0.82	+0.0
3,159,495	-		A4249_RS15620	0.82	-0.5
3,159,572	+				-0.1
3,159,572	+				-0.3
3,159,572	+				+0.7
3,159,572	+				+1.0
3,159,573	-				+0.2
3,159,573	-				+0.3
3,159,573	-				-0.6
3,159,573	-				+0.2
3,159,573	-				-1.4
3,159,573	-				-2.4
3,159,617	+				-0.7
3,159,617	+				+1.3
3,159,618	-				-1.1
3,159,630	-				-0.3
3,159,630	-				-1.8
3,159,691	+				-0.1
3,159,691	+				+0.4
3,159,692	-				-1.9
3,159,692	-				+0.3
3,159,692	-				-0.2
3,159,844	+		A4249_RS15625	0.15	-0.3
3,159,845	-		A4249_RS15625	0.16	-0.8
3,159,946	+		A4249_RS15625	0.30	-0.2
3,159,946	+		A4249_RS15625	0.30	+1.4
3,159,946	+		A4249_RS15625	0.30	+0.4
3,159,946	+		A4249_RS15625	0.30	+0.3
3,160,123	+		A4249_RS15625	0.56	-0.1
3,160,123	+		A4249_RS15625	0.56	+0.6
3,160,123	+		A4249_RS15625	0.56	+0.5
3,160,124	-		A4249_RS15625	0.56	-0.9
3,160,124	-		A4249_RS15625	0.56	+0.5
3,160,124	-		A4249_RS15625	0.56	-0.2
3,160,204	+		A4249_RS15625	0.68	-0.4
3,160,204	+		A4249_RS15625	0.68	+0.6
3,160,204	+		A4249_RS15625	0.68	+1.1
3,160,204	+		A4249_RS15625	0.68	+0.1
3,160,204	+		A4249_RS15625	0.68	-1.6
3,160,204	+		A4249_RS15625	0.68	+0.9
3,160,205	-		A4249_RS15625	0.68	+0.1
3,160,339	+		A4249_RS15625	0.87	-2.8
3,160,459	+				+0.7
3,160,459	+				+1.2
3,160,459	+				-1.2
3,160,459	+				-0.9
3,160,459	+				-0.3
3,160,459	+				+0.5
3,160,459	+				-0.5
3,160,459	+				-0.5
3,160,460	-				-3.0
3,160,460	-				-0.6
3,160,460	-				+0.1
3,160,603	+				-1.1