Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15060

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
3,045,758	+		A4249_RS15050	0.62	+0.5
3,045,758	+		A4249_RS15050	0.62	-0.3
3,045,759	-		A4249_RS15050	0.62	-0.5
3,046,053	+		A4249_RS15055	0.13	-0.1
3,046,053	+		A4249_RS15055	0.13	+0.1
3,046,054	-		A4249_RS15055	0.13	-0.7
3,046,054	-		A4249_RS15055	0.13	-0.1
3,046,107	+		A4249_RS15055	0.20	+1.4
3,046,314	+		A4249_RS15055	0.49	-0.1
3,046,394	+		A4249_RS15055	0.60	+0.9
3,046,394	+		A4249_RS15055	0.60	+1.1
3,046,723	+				-0.5
3,046,724	-				-2.1
3,046,724	-				-1.2
3,046,724	-				-0.0
3,046,762	+				+0.1
3,046,763	-				-0.5
3,046,786	+		A4249_RS15060	0.11	+1.0
3,046,786	+		A4249_RS15060	0.11	-0.6
3,046,787	-		A4249_RS15060	0.11	-1.3
3,046,787	-		A4249_RS15060	0.11	+0.2
3,046,787	-		A4249_RS15060	0.11	+0.1
3,046,787	-		A4249_RS15060	0.11	+0.4
3,046,993	+		A4249_RS15060	0.27	-0.8
3,046,993	+		A4249_RS15060	0.27	+1.0
3,046,993	+		A4249_RS15060	0.27	-0.5
3,046,993	+		A4249_RS15060	0.27	-1.5
3,046,993	+		A4249_RS15060	0.27	-0.2
3,046,994	-		A4249_RS15060	0.27	-1.0
3,046,994	-		A4249_RS15060	0.27	+0.5
3,046,994	-		A4249_RS15060	0.27	+0.2
3,046,994	-		A4249_RS15060	0.27	-0.8
3,047,026	+		A4249_RS15060	0.30	-1.3
3,047,026	+		A4249_RS15060	0.30	-0.5
3,047,027	-		A4249_RS15060	0.30	+1.6
3,047,027	-		A4249_RS15060	0.30	+0.0
3,047,027	-		A4249_RS15060	0.30	-0.7
3,047,093	-		A4249_RS15060	0.35	+1.5
3,047,093	-		A4249_RS15060	0.35	-1.5
3,047,093	-		A4249_RS15060	0.35	-1.1
3,047,093	-		A4249_RS15060	0.35	+0.7
3,047,093	-		A4249_RS15060	0.35	+0.7
3,047,143	+		A4249_RS15060	0.39	-0.7
3,047,144	-		A4249_RS15060	0.39	+0.7
3,047,144	-		A4249_RS15060	0.39	+0.4
3,047,188	+		A4249_RS15060	0.42	-0.4
3,047,446	+		A4249_RS15060	0.62	-0.6
3,047,446	+		A4249_RS15060	0.62	-0.7
3,047,446	+		A4249_RS15060	0.62	+0.6
3,047,446	+		A4249_RS15060	0.62	-0.4
3,047,447	-		A4249_RS15060	0.62	+0.3
3,047,512	+		A4249_RS15060	0.68	-2.3
3,047,512	+		A4249_RS15060	0.68	-0.2
3,047,512	+		A4249_RS15060	0.68	+0.6
3,047,512	+		A4249_RS15060	0.68	+0.5
3,047,512	+		A4249_RS15060	0.68	-0.2
3,047,512	+		A4249_RS15060	0.68	+1.0
3,047,512	+		A4249_RS15060	0.68	-0.9
3,047,513	-		A4249_RS15060	0.68	+0.0
3,047,513	-		A4249_RS15060	0.68	+0.8
3,047,513	-		A4249_RS15060	0.68	+0.0
3,047,513	-		A4249_RS15060	0.68	-0.3
3,047,513	-		A4249_RS15060	0.68	-1.5
3,047,513	-		A4249_RS15060	0.68	+0.5
3,047,513	-		A4249_RS15060	0.68	-0.2
3,047,513	-		A4249_RS15060	0.68	-1.0
3,047,566	+		A4249_RS15060	0.72	+1.2
3,047,566	+		A4249_RS15060	0.72	+0.3
3,047,566	+		A4249_RS15060	0.72	-0.1
3,047,567	-		A4249_RS15060	0.72	-0.3
3,047,567	-		A4249_RS15060	0.72	-0.4
3,047,567	-		A4249_RS15060	0.72	-1.2
3,047,797	+		A4249_RS15060	0.90	-0.9
3,047,798	-		A4249_RS15060	0.90	+1.2
3,047,798	-		A4249_RS15060	0.90	-0.7
3,047,900	-				-1.2
3,047,920	+				-1.8
3,047,920	+				-0.3
3,047,920	+				+0.7
3,047,920	+				-0.4
3,047,921	-				-0.4
3,047,921	-				-0.2
3,047,969	+				+1.3
3,047,969	+				-0.7
3,047,969	+				+1.0
3,047,969	+				-0.8
3,047,969	+				-0.7
3,047,969	+				-0.1
3,047,969	+				-1.2
3,047,969	+				-0.6
3,047,969	+				+0.4
3,047,969	+				-0.1
3,047,969	+				+1.2
3,047,969	+				+0.3
3,047,969	+				-0.4
3,047,969	+				+0.7
3,047,969	+				-1.9
3,047,969	+				-1.8
3,047,969	+				+1.7
3,047,969	+				-0.3
3,047,969	+				+0.0
3,047,969	+				-0.4
3,047,969	+				+0.9
3,047,969	+				+0.8
3,047,969	+				-0.2
3,047,969	+				+0.7
3,047,969	+				-0.3
3,047,969	+				-0.5
3,047,970	-				-0.3
3,047,970	-				-0.9
3,047,970	-				-0.7
3,047,970	-				+0.3
3,047,970	-				-1.2
3,047,970	-				+1.1
3,047,970	-				-1.6
3,047,970	-				-0.1
3,047,970	-				+0.1
3,047,970	-				-0.2
3,047,970	-				+1.0
3,047,970	-				-0.1
3,047,970	-				-1.7
3,047,970	-				+1.2
3,047,970	-				+0.2
3,047,970	-				-0.7
3,047,971	+				-1.8
3,047,971	+				-0.1
3,047,971	+				+0.8
3,047,971	+				+0.6
3,047,971	+				-0.5
3,047,971	+				+0.6
3,047,971	+				+0.9
3,047,971	+				-0.7
3,047,971	+				+1.2
3,047,971	+				-0.1
3,047,971	+				+0.8
3,047,971	+				+0.0
3,047,971	-				+0.1
3,047,972	-				+0.0
3,047,972	-				-0.2
3,047,972	-				+1.2
3,047,972	-				+0.4
3,047,972	-				-0.5
3,047,972	-				+1.1
3,047,972	-				+0.2
3,047,972	-				-0.1
3,047,972	-				-0.6
3,047,972	-				+0.3
3,047,972	-				-0.8
3,047,972	-				+0.4
3,047,972	-				-0.5
3,047,972	-				+0.3
3,047,972	-				+0.1
3,047,972	-				-1.4
3,047,995	+				+1.5
3,047,996	-				-0.0
3,047,996	-				-0.2
3,048,066	+				+0.2
3,048,108	+		A4249_RS15065	0.16	-0.2
3,048,108	+		A4249_RS15065	0.16	-0.4
3,048,109	-		A4249_RS15065	0.16	-1.7
3,048,109	-		A4249_RS15065	0.16	+0.3
3,048,109	-		A4249_RS15065	0.16	-0.1
3,048,133	+		A4249_RS15065	0.20	+0.0
3,048,133	+		A4249_RS15065	0.20	-1.3
3,048,133	+		A4249_RS15065	0.20	+0.3
3,048,133	+		A4249_RS15065	0.20	+0.0
3,048,133	+		A4249_RS15065	0.20	-0.1
3,048,135	+		A4249_RS15065	0.20	+0.2
3,048,135	+		A4249_RS15065	0.20	-0.4
3,048,135	+		A4249_RS15065	0.20	-1.3
3,048,135	+		A4249_RS15065	0.20	-0.1
3,048,136	-		A4249_RS15065	0.21	+0.7
3,048,136	-		A4249_RS15065	0.21	-1.4
3,048,162	+		A4249_RS15065	0.25	-0.1
3,048,162	+		A4249_RS15065	0.25	-0.7
3,048,162	+		A4249_RS15065	0.25	+0.3
3,048,163	-		A4249_RS15065	0.25	-0.5
3,048,255	+		A4249_RS15065	0.40	+1.5
3,048,255	+		A4249_RS15065	0.40	-0.5
3,048,255	+		A4249_RS15065	0.40	+1.1
3,048,255	+		A4249_RS15065	0.40	+1.7
3,048,255	+		A4249_RS15065	0.40	-1.3
3,048,256	-		A4249_RS15065	0.40	-0.5
3,048,256	-		A4249_RS15065	0.40	-0.7
3,048,393	+		A4249_RS15065	0.62	+0.5
3,048,393	+		A4249_RS15065	0.62	-1.7
3,048,393	+		A4249_RS15065	0.62	+0.5
3,048,393	+		A4249_RS15065	0.62	-1.0
3,048,393	+		A4249_RS15065	0.62	-0.9
3,048,393	+		A4249_RS15065	0.62	-0.4
3,048,393	+		A4249_RS15065	0.62	-0.8
3,048,664	+				-1.0
3,048,664	+				-0.2
3,048,664	+				-0.3
3,048,664	+				-0.2
3,048,664	+				-0.7
3,048,665	-				-1.3
3,048,665	-				-0.4
3,048,665	-				+0.3
3,048,666	+				-0.9
3,048,666	+				-0.5
3,048,666	+				+0.8
3,048,666	+				-0.5
3,048,666	+				-0.4
3,048,666	+				+0.3
3,048,666	+				-0.5
3,048,666	+				+1.0
3,048,666	+				+0.0
3,048,666	+				+0.3
3,048,667	-				-1.1
3,048,667	-				+0.5
3,048,667	-				+0.7
3,048,667	-				-2.5
3,048,667	-				-0.9
3,048,667	-				-1.5
3,048,667	-				-0.9
3,048,667	-				+0.5
3,048,667	-				-0.6
3,048,667	-				-0.9
3,048,667	-				-0.5
3,048,667	-				+0.9
3,048,667	-				+0.1
3,048,667	-				-0.3
3,048,667	-				-0.6
3,048,667	-				+0.7
3,048,667	-				+0.4