Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14915

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
3,017,980	+		A4249_RS14910	0.69	+0.3
3,017,980	+		A4249_RS14910	0.69	+0.6
3,017,980	+		A4249_RS14910	0.69	-0.1
3,017,980	+		A4249_RS14910	0.69	-1.3
3,017,980	+		A4249_RS14910	0.69	+0.1
3,017,981	-		A4249_RS14910	0.69	+0.7
3,017,981	-		A4249_RS14910	0.69	-0.9
3,017,981	-		A4249_RS14910	0.69	-0.7
3,017,983	+		A4249_RS14910	0.70	+0.7
3,017,983	+		A4249_RS14910	0.70	+0.8
3,017,983	+		A4249_RS14910	0.70	+0.4
3,017,983	+		A4249_RS14910	0.70	+0.4
3,017,983	+		A4249_RS14910	0.70	+0.6
3,017,983	+		A4249_RS14910	0.70	+0.3
3,017,983	+		A4249_RS14910	0.70	+0.5
3,017,984	-		A4249_RS14910	0.70	+0.9
3,017,984	-		A4249_RS14910	0.70	-0.5
3,017,984	-		A4249_RS14910	0.70	+1.1
3,017,984	-		A4249_RS14910	0.70	-1.3
3,017,984	-		A4249_RS14910	0.70	-0.4
3,018,019	+		A4249_RS14910	0.73	+0.4
3,018,020	-		A4249_RS14910	0.73	-0.3
3,018,119	+		A4249_RS14910	0.81	-1.4
3,018,119	+		A4249_RS14910	0.81	-1.0
3,018,119	+		A4249_RS14910	0.81	+0.4
3,018,119	+		A4249_RS14910	0.81	+0.3
3,018,119	+		A4249_RS14910	0.81	+0.7
3,018,119	+		A4249_RS14910	0.81	-0.6
3,018,119	+		A4249_RS14910	0.81	+0.1
3,018,119	+		A4249_RS14910	0.81	-1.4
3,018,119	+		A4249_RS14910	0.81	+1.6
3,018,119	+		A4249_RS14910	0.81	-0.3
3,018,119	+		A4249_RS14910	0.81	-0.6
3,018,120	-		A4249_RS14910	0.81	+0.2
3,018,120	-		A4249_RS14910	0.81	+0.2
3,018,120	-		A4249_RS14910	0.81	-0.3
3,018,120	-		A4249_RS14910	0.81	-0.7
3,018,120	-		A4249_RS14910	0.81	+1.2
3,018,120	-		A4249_RS14910	0.81	-0.1
3,018,120	-		A4249_RS14910	0.81	-1.7
3,018,120	-		A4249_RS14910	0.81	-0.0
3,018,121	+		A4249_RS14910	0.81	+0.4
3,018,121	+		A4249_RS14910	0.81	-0.3
3,018,121	+		A4249_RS14910	0.81	-0.7
3,018,293	-				+0.4
3,018,451	+				+0.4
3,018,451	+				+0.4
3,018,451	+				-0.1
3,018,452	-				+1.1
3,018,477	+				+0.3
3,018,477	+				+0.3
3,018,477	+				-0.6
3,018,477	+				-0.9
3,018,524	+				-0.6
3,018,524	+				-1.1
3,018,524	+				-1.8
3,018,567	+				+0.9
3,018,567	+				+0.7
3,018,567	+				-0.0
3,018,578	+				+1.8
3,019,730	-				+1.3
3,019,849	+				-0.4
3,019,850	-				-1.5
3,019,850	-				+0.5
3,019,866	+				+0.7
3,019,867	-				+0.7
3,019,867	-				+2.4
3,019,867	-				+0.5
3,019,893	+				+0.4
3,019,893	+				+0.4
3,019,924	+		A4249_RS14920	0.15	+1.0
3,019,937	-		A4249_RS14920	0.18	+0.3
3,020,245	+		A4249_RS14920	0.87	-0.3
3,020,245	+		A4249_RS14920	0.87	+0.4
3,020,245	+		A4249_RS14920	0.87	-0.8
3,020,245	+		A4249_RS14920	0.87	-0.1
3,020,245	+		A4249_RS14920	0.87	+0.7
3,020,245	+		A4249_RS14920	0.87	+0.4
3,020,245	+		A4249_RS14920	0.87	+0.5
3,020,246	-		A4249_RS14920	0.87	+0.2
3,020,246	-		A4249_RS14920	0.87	-2.6
3,020,246	-		A4249_RS14920	0.87	+0.6
3,020,246	-		A4249_RS14920	0.87	+0.4
3,020,253	+		A4249_RS14920	0.88	+0.6
3,020,253	+		A4249_RS14920	0.88	-0.2
3,020,253	+		A4249_RS14920	0.88	+0.3
3,020,253	+		A4249_RS14920	0.88	+0.6
3,020,254	-		A4249_RS14920	0.89	+1.5
3,020,254	-		A4249_RS14920	0.89	+0.2
3,020,254	-		A4249_RS14920	0.89	-1.3
3,020,254	-		A4249_RS14920	0.89	-0.8
3,020,287	+				+0.4
3,020,287	+				-0.3
3,020,287	+				-0.5
3,020,287	+				-0.1
3,020,288	-				+0.4
3,020,288	-				-0.9
3,020,302	+				+0.2
3,020,302	+				-0.5
3,020,302	+				-2.2
3,020,302	+				-0.2
3,020,302	+				+1.6
3,020,302	+				-1.7
3,020,303	-				+0.5
3,020,303	-				-0.5
3,020,303	-				-1.7
3,020,303	-				-0.7
3,020,303	-				-1.2
3,020,334	+				+0.2
3,020,430	+				+0.5
3,020,430	+				+0.8
3,020,430	+				+0.5
3,020,431	-				-0.8
3,020,431	-				+0.3
3,020,431	-				-1.3
3,020,603	-		A4249_RS14925	0.22	-0.5
3,020,603	-		A4249_RS14925	0.22	-0.3
3,020,611	-		A4249_RS14925	0.23	+1.2
3,020,701	+		A4249_RS14925	0.31	+0.3
3,020,702	-		A4249_RS14925	0.32	-1.3
3,020,702	-		A4249_RS14925	0.32	+0.1
3,020,702	-		A4249_RS14925	0.32	-1.3
3,020,702	-		A4249_RS14925	0.32	+0.8
3,020,746	+		A4249_RS14925	0.36	-0.4
3,020,746	+		A4249_RS14925	0.36	-0.5
3,020,746	+		A4249_RS14925	0.36	+0.1
3,020,746	+		A4249_RS14925	0.36	-0.2
3,020,746	+		A4249_RS14925	0.36	+0.5
3,020,747	-		A4249_RS14925	0.36	-0.7
3,020,747	-		A4249_RS14925	0.36	+0.4
3,020,747	-		A4249_RS14925	0.36	-0.8
3,020,747	-		A4249_RS14925	0.36	-0.3
3,020,747	-		A4249_RS14925	0.36	-1.5
3,020,747	-		A4249_RS14925	0.36	+1.3
3,020,747	-		A4249_RS14925	0.36	-0.1
3,020,747	-		A4249_RS14925	0.36	-0.0
3,020,761	+		A4249_RS14925	0.37	-0.5
3,020,761	+		A4249_RS14925	0.37	+0.5
3,020,762	-		A4249_RS14925	0.37	-0.6
3,020,762	-		A4249_RS14925	0.37	+0.7
3,020,762	-		A4249_RS14925	0.37	-1.7
3,020,770	+		A4249_RS14925	0.38	+0.0
3,020,770	+		A4249_RS14925	0.38	-0.1
3,020,770	+		A4249_RS14925	0.38	+0.2
3,020,770	+		A4249_RS14925	0.38	+0.1
3,020,770	+		A4249_RS14925	0.38	-0.3
3,020,770	+		A4249_RS14925	0.38	+0.7
3,020,770	+		A4249_RS14925	0.38	+1.5
3,020,770	+		A4249_RS14925	0.38	+1.3
3,020,770	+		A4249_RS14925	0.38	-0.8
3,020,770	+		A4249_RS14925	0.38	-1.5
3,020,770	+		A4249_RS14925	0.38	+0.7
3,020,770	+		A4249_RS14925	0.38	+0.0
3,020,770	+		A4249_RS14925	0.38	+0.9
3,020,770	+		A4249_RS14925	0.38	+0.7
3,020,770	+		A4249_RS14925	0.38	-0.1
3,020,770	+		A4249_RS14925	0.38	-0.4
3,020,770	+		A4249_RS14925	0.38	+0.1
3,020,770	+		A4249_RS14925	0.38	-0.1
3,020,770	+		A4249_RS14925	0.38	+0.2
3,020,770	+		A4249_RS14925	0.38	+0.6
3,020,770	+		A4249_RS14925	0.38	+0.2
3,020,771	-		A4249_RS14925	0.38	+0.5
3,020,771	-		A4249_RS14925	0.38	+0.6
3,020,771	-		A4249_RS14925	0.38	+0.3
3,020,771	-		A4249_RS14925	0.38	-1.3
3,020,771	-		A4249_RS14925	0.38	+1.6
3,020,771	-		A4249_RS14925	0.38	+1.0
3,020,771	-		A4249_RS14925	0.38	-0.3
3,020,771	-		A4249_RS14925	0.38	+1.7
3,020,771	-		A4249_RS14925	0.38	+0.6
3,020,771	-		A4249_RS14925	0.38	-1.5
3,020,771	-		A4249_RS14925	0.38	+0.5
3,020,771	-		A4249_RS14925	0.38	+0.1
3,020,771	-		A4249_RS14925	0.38	+0.0
3,020,771	-		A4249_RS14925	0.38	+0.7
3,020,771	-		A4249_RS14925	0.38	-0.3
3,020,771	-		A4249_RS14925	0.38	-0.9
3,020,771	-		A4249_RS14925	0.38	-0.5
3,020,771	-		A4249_RS14925	0.38	+0.5
3,020,773	-		A4249_RS14925	0.38	-2.3
3,020,773	-		A4249_RS14925	0.38	-1.9