Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14490

Experiment: Cytidine 0.41115 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14485 and A4249_RS14490 are separated by 44 nucleotidesA4249_RS14490 and A4249_RS14495 are separated by 56 nucleotides A4249_RS14485: A4249_RS14485 - phosphoenolpyruvate--protein phosphotransferase, at 2,930,113 to 2,932,389 _RS14485 A4249_RS14490: A4249_RS14490 - aspartate kinase, at 2,932,434 to 2,933,708 _RS14490 A4249_RS14495: A4249_RS14495 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 2,933,765 to 2,934,580 _RS14495 Position (kb) 2932 2933 2934Strain fitness (log2 ratio) -2 -1 0 1at 2931.471 kb on + strand, within A4249_RS14485at 2931.474 kb on - strand, within A4249_RS14485at 2931.736 kb on + strand, within A4249_RS14485at 2931.948 kb on - strand, within A4249_RS14485at 2931.948 kb on - strand, within A4249_RS14485at 2932.031 kb on + strand, within A4249_RS14485at 2932.032 kb on - strand, within A4249_RS14485at 2932.032 kb on - strand, within A4249_RS14485at 2932.032 kb on - strand, within A4249_RS14485at 2932.226 kb on + strandat 2932.226 kb on + strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.414 kb on - strandat 2932.414 kb on - strandat 2932.435 kb on + strandat 2932.435 kb on + strandat 2932.435 kb on + strandat 2932.435 kb on + strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.666 kb on + strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strandat 2934.667 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C)
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2,931,471 + A4249_RS14485 0.60 +0.0
2,931,474 - A4249_RS14485 0.60 +1.6
2,931,736 + A4249_RS14485 0.71 +0.6
2,931,948 - A4249_RS14485 0.81 -1.3
2,931,948 - A4249_RS14485 0.81 -0.0
2,932,031 + A4249_RS14485 0.84 +0.2
2,932,032 - A4249_RS14485 0.84 -1.1
2,932,032 - A4249_RS14485 0.84 -0.9
2,932,032 - A4249_RS14485 0.84 +1.5
2,932,226 + +0.9
2,932,226 + +0.8
2,932,227 - +1.7
2,932,227 - +1.0
2,932,227 - +0.4
2,932,227 - +1.5
2,932,227 - +0.1
2,932,414 - +0.1
2,932,414 - -0.6
2,932,435 + +0.3
2,932,435 + +0.0
2,932,435 + +1.3
2,932,435 + -0.1
2,932,436 - +1.2
2,932,436 - -0.2
2,932,436 - +0.1
2,932,436 - -0.4
2,932,436 - +0.4
2,932,436 - -2.3
2,934,666 + -0.1
2,934,666 + -1.3
2,934,666 + -0.6
2,934,666 + -1.2
2,934,666 + -1.8
2,934,666 + +0.2
2,934,666 + +0.5
2,934,666 + +0.1
2,934,667 - +0.0
2,934,667 - -0.1
2,934,667 - -0.1
2,934,667 - +1.1
2,934,667 - -0.1
2,934,667 - -1.1
2,934,667 - +0.4
2,934,667 - +0.3
2,934,667 - +0.1

Or see this region's nucleotide sequence