Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13855 and A4249_RS13860 are separated by 10 nucleotides A4249_RS13860 and A4249_RS13865 are separated by 116 nucleotides A4249_RS13865 and A4249_RS13870 are separated by 1 nucleotides
A4249_RS13855: A4249_RS13855 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 2,798,017 to 2,798,589
_RS13855
A4249_RS13860: A4249_RS13860 - hypothetical protein, at 2,798,600 to 2,798,944
_RS13860
A4249_RS13865: A4249_RS13865 - electron transfer flavoprotein subunit beta/FixA family protein, at 2,799,061 to 2,799,825
_RS13865
A4249_RS13870: A4249_RS13870 - electron transfer flavoprotein subunit alpha/FixB family protein, at 2,799,827 to 2,800,756
_RS13870
Position (kb)
2799
2800 Strain fitness (log2 ratio)
-1
0
1
2 at 2798.119 kb on + strand, within A4249_RS13855 at 2798.119 kb on + strand, within A4249_RS13855 at 2798.120 kb on - strand, within A4249_RS13855 at 2798.120 kb on - strand, within A4249_RS13855 at 2798.120 kb on - strand, within A4249_RS13855 at 2798.255 kb on + strand, within A4249_RS13855 at 2798.255 kb on + strand, within A4249_RS13855 at 2798.255 kb on + strand, within A4249_RS13855 at 2798.255 kb on + strand, within A4249_RS13855 at 2798.491 kb on + strand, within A4249_RS13855 at 2798.491 kb on + strand, within A4249_RS13855 at 2798.491 kb on + strand, within A4249_RS13855 at 2798.491 kb on + strand, within A4249_RS13855 at 2798.491 kb on + strand, within A4249_RS13855 at 2798.492 kb on - strand, within A4249_RS13855 at 2798.492 kb on - strand, within A4249_RS13855 at 2798.492 kb on - strand, within A4249_RS13855 at 2798.992 kb on + strand at 2798.992 kb on + strand at 2798.992 kb on + strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2798.993 kb on - strand at 2800.755 kb on - strand at 2800.822 kb on + strand at 2800.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 2,798,119 + A4249_RS13855 0.18 +0.5 2,798,119 + A4249_RS13855 0.18 +0.5 2,798,120 - A4249_RS13855 0.18 +1.3 2,798,120 - A4249_RS13855 0.18 -0.4 2,798,120 - A4249_RS13855 0.18 +0.4 2,798,255 + A4249_RS13855 0.42 -0.8 2,798,255 + A4249_RS13855 0.42 -0.2 2,798,255 + A4249_RS13855 0.42 +0.1 2,798,255 + A4249_RS13855 0.42 -1.1 2,798,491 + A4249_RS13855 0.83 +0.3 2,798,491 + A4249_RS13855 0.83 -1.4 2,798,491 + A4249_RS13855 0.83 +0.4 2,798,491 + A4249_RS13855 0.83 -0.8 2,798,491 + A4249_RS13855 0.83 +0.6 2,798,492 - A4249_RS13855 0.83 +0.7 2,798,492 - A4249_RS13855 0.83 -0.2 2,798,492 - A4249_RS13855 0.83 -1.4 2,798,992 + +0.0 2,798,992 + +0.5 2,798,992 + +2.1 2,798,993 - +0.0 2,798,993 - -1.5 2,798,993 - -0.6 2,798,993 - -0.8 2,798,993 - -0.1 2,800,755 - -0.0 2,800,822 + +0.2 2,800,823 - +1.6
Or see this region's nucleotide sequence