Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12690 and A4249_RS12695 are separated by 136 nucleotides A4249_RS12695 and A4249_RS12700 are separated by 25 nucleotides
A4249_RS12690: A4249_RS12690 - aspartate-semialdehyde dehydrogenase, at 2,545,000 to 2,546,046
_RS12690
A4249_RS12695: A4249_RS12695 - EamA family transporter RarD, at 2,546,183 to 2,547,109
_RS12695
A4249_RS12700: A4249_RS12700 - MFS transporter, at 2,547,135 to 2,548,649
_RS12700
Position (kb)
2546
2547
2548 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2545.839 kb on + strand, within A4249_RS12690 at 2545.877 kb on - strand, within A4249_RS12690 at 2546.240 kb on + strand at 2546.240 kb on + strand at 2546.240 kb on + strand at 2546.240 kb on + strand at 2546.240 kb on + strand at 2546.240 kb on + strand at 2546.240 kb on + strand at 2546.241 kb on - strand at 2546.241 kb on - strand at 2546.241 kb on - strand at 2546.241 kb on - strand at 2546.241 kb on - strand at 2546.241 kb on - strand at 2546.465 kb on + strand, within A4249_RS12695 at 2546.465 kb on + strand, within A4249_RS12695 at 2546.465 kb on + strand, within A4249_RS12695 at 2546.465 kb on + strand, within A4249_RS12695 at 2546.465 kb on + strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.466 kb on - strand, within A4249_RS12695 at 2546.513 kb on + strand, within A4249_RS12695 at 2546.513 kb on + strand, within A4249_RS12695 at 2546.513 kb on + strand, within A4249_RS12695 at 2546.513 kb on + strand, within A4249_RS12695 at 2546.514 kb on - strand, within A4249_RS12695 at 2546.514 kb on - strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.516 kb on + strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.517 kb on - strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.518 kb on + strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2546.519 kb on - strand, within A4249_RS12695 at 2547.107 kb on + strand at 2547.108 kb on - strand at 2547.108 kb on - strand at 2547.108 kb on - strand at 2547.304 kb on + strand, within A4249_RS12700 at 2547.304 kb on + strand, within A4249_RS12700 at 2547.304 kb on + strand, within A4249_RS12700 at 2547.304 kb on + strand, within A4249_RS12700 at 2547.357 kb on + strand, within A4249_RS12700 at 2547.357 kb on + strand, within A4249_RS12700 at 2547.358 kb on - strand, within A4249_RS12700 at 2547.358 kb on - strand, within A4249_RS12700 at 2547.358 kb on - strand, within A4249_RS12700 at 2547.358 kb on - strand, within A4249_RS12700 at 2548.020 kb on + strand, within A4249_RS12700 at 2548.020 kb on + strand, within A4249_RS12700 at 2548.020 kb on + strand, within A4249_RS12700 at 2548.020 kb on + strand, within A4249_RS12700 at 2548.020 kb on + strand, within A4249_RS12700 at 2548.020 kb on + strand, within A4249_RS12700 at 2548.021 kb on - strand, within A4249_RS12700 at 2548.021 kb on - strand, within A4249_RS12700
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 2,545,839 + A4249_RS12690 0.80 +1.8 2,545,877 - A4249_RS12690 0.84 +0.8 2,546,240 + +1.5 2,546,240 + +1.5 2,546,240 + -0.4 2,546,240 + -0.8 2,546,240 + -1.6 2,546,240 + -0.5 2,546,240 + +0.3 2,546,241 - -0.1 2,546,241 - -0.2 2,546,241 - -0.4 2,546,241 - -1.8 2,546,241 - +1.0 2,546,241 - -0.2 2,546,465 + A4249_RS12695 0.30 -0.3 2,546,465 + A4249_RS12695 0.30 -0.3 2,546,465 + A4249_RS12695 0.30 -1.1 2,546,465 + A4249_RS12695 0.30 -0.0 2,546,465 + A4249_RS12695 0.30 -0.4 2,546,466 - A4249_RS12695 0.31 +2.1 2,546,466 - A4249_RS12695 0.31 -0.5 2,546,466 - A4249_RS12695 0.31 -0.5 2,546,466 - A4249_RS12695 0.31 -0.0 2,546,466 - A4249_RS12695 0.31 -0.2 2,546,466 - A4249_RS12695 0.31 -0.3 2,546,466 - A4249_RS12695 0.31 -1.8 2,546,513 + A4249_RS12695 0.36 +0.1 2,546,513 + A4249_RS12695 0.36 -0.2 2,546,513 + A4249_RS12695 0.36 -0.6 2,546,513 + A4249_RS12695 0.36 -0.6 2,546,514 - A4249_RS12695 0.36 +0.1 2,546,514 - A4249_RS12695 0.36 -0.5 2,546,516 + A4249_RS12695 0.36 +2.0 2,546,516 + A4249_RS12695 0.36 -1.4 2,546,516 + A4249_RS12695 0.36 -0.5 2,546,516 + A4249_RS12695 0.36 -0.6 2,546,516 + A4249_RS12695 0.36 +0.3 2,546,516 + A4249_RS12695 0.36 +0.4 2,546,516 + A4249_RS12695 0.36 +1.1 2,546,516 + A4249_RS12695 0.36 +0.8 2,546,516 + A4249_RS12695 0.36 +0.6 2,546,517 - A4249_RS12695 0.36 +0.3 2,546,517 - A4249_RS12695 0.36 +0.2 2,546,517 - A4249_RS12695 0.36 +0.8 2,546,517 - A4249_RS12695 0.36 -0.4 2,546,517 - A4249_RS12695 0.36 +0.2 2,546,517 - A4249_RS12695 0.36 -0.5 2,546,517 - A4249_RS12695 0.36 -1.9 2,546,517 - A4249_RS12695 0.36 +0.5 2,546,518 + A4249_RS12695 0.36 -0.6 2,546,518 + A4249_RS12695 0.36 -0.9 2,546,518 + A4249_RS12695 0.36 -1.0 2,546,518 + A4249_RS12695 0.36 -0.9 2,546,518 + A4249_RS12695 0.36 -0.7 2,546,518 + A4249_RS12695 0.36 -0.4 2,546,518 + A4249_RS12695 0.36 -0.4 2,546,518 + A4249_RS12695 0.36 -2.1 2,546,519 - A4249_RS12695 0.36 +0.2 2,546,519 - A4249_RS12695 0.36 +0.1 2,546,519 - A4249_RS12695 0.36 +0.4 2,546,519 - A4249_RS12695 0.36 +0.6 2,546,519 - A4249_RS12695 0.36 +0.3 2,546,519 - A4249_RS12695 0.36 +1.4 2,546,519 - A4249_RS12695 0.36 -0.1 2,546,519 - A4249_RS12695 0.36 -0.4 2,546,519 - A4249_RS12695 0.36 -0.2 2,546,519 - A4249_RS12695 0.36 +0.2 2,546,519 - A4249_RS12695 0.36 -0.3 2,546,519 - A4249_RS12695 0.36 +1.3 2,546,519 - A4249_RS12695 0.36 +0.2 2,546,519 - A4249_RS12695 0.36 -0.2 2,546,519 - A4249_RS12695 0.36 -1.3 2,546,519 - A4249_RS12695 0.36 +0.1 2,546,519 - A4249_RS12695 0.36 +2.0 2,547,107 + -0.1 2,547,108 - +0.1 2,547,108 - +0.4 2,547,108 - -0.4 2,547,304 + A4249_RS12700 0.11 -0.5 2,547,304 + A4249_RS12700 0.11 +0.2 2,547,304 + A4249_RS12700 0.11 -0.4 2,547,304 + A4249_RS12700 0.11 -0.4 2,547,357 + A4249_RS12700 0.15 -0.7 2,547,357 + A4249_RS12700 0.15 -0.8 2,547,358 - A4249_RS12700 0.15 +0.1 2,547,358 - A4249_RS12700 0.15 -0.5 2,547,358 - A4249_RS12700 0.15 -0.1 2,547,358 - A4249_RS12700 0.15 -0.3 2,548,020 + A4249_RS12700 0.58 -1.0 2,548,020 + A4249_RS12700 0.58 +0.5 2,548,020 + A4249_RS12700 0.58 -0.7 2,548,020 + A4249_RS12700 0.58 +1.5 2,548,020 + A4249_RS12700 0.58 -0.3 2,548,020 + A4249_RS12700 0.58 -0.3 2,548,021 - A4249_RS12700 0.58 -0.3 2,548,021 - A4249_RS12700 0.58 -0.4
Or see this region's nucleotide sequence