Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12490

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
2,502,758	+				-0.5
2,502,758	+				-0.7
2,502,758	+				-0.6
2,502,759	-				-1.7
2,502,759	-				-0.8
2,502,759	-				-0.6
2,502,759	-				-0.7
2,502,759	-				+0.6
2,502,816	+		A4249_RS12485	0.12	-0.2
2,502,817	-		A4249_RS12485	0.12	+0.2
2,502,944	+		A4249_RS12485	0.26	-0.6
2,502,944	+		A4249_RS12485	0.26	-0.4
2,502,944	+		A4249_RS12485	0.26	-0.2
2,502,944	+		A4249_RS12485	0.26	+0.2
2,502,944	+		A4249_RS12485	0.26	-0.5
2,502,944	+		A4249_RS12485	0.26	-0.2
2,502,944	+		A4249_RS12485	0.26	-1.3
2,502,944	+		A4249_RS12485	0.26	-1.8
2,502,944	+		A4249_RS12485	0.26	-0.9
2,502,945	-		A4249_RS12485	0.26	+0.5
2,502,945	-		A4249_RS12485	0.26	-0.6
2,502,945	-		A4249_RS12485	0.26	-1.0
2,502,945	-		A4249_RS12485	0.26	-0.6
2,502,945	-		A4249_RS12485	0.26	-0.8
2,502,945	-		A4249_RS12485	0.26	-0.3
2,502,945	-		A4249_RS12485	0.26	-0.7
2,502,945	-		A4249_RS12485	0.26	-0.5
2,503,175	+		A4249_RS12485	0.51	+1.1
2,503,175	+		A4249_RS12485	0.51	+0.6
2,503,176	-		A4249_RS12485	0.51	-0.1
2,503,176	-		A4249_RS12485	0.51	-1.5
2,503,176	-		A4249_RS12485	0.51	+0.5
2,503,274	+		A4249_RS12485	0.62	-0.6
2,503,274	+		A4249_RS12485	0.62	-0.1
2,503,274	+		A4249_RS12485	0.62	-0.3
2,503,274	+		A4249_RS12485	0.62	-0.4
2,503,274	+		A4249_RS12485	0.62	-0.6
2,503,274	+		A4249_RS12485	0.62	-0.4
2,503,274	+		A4249_RS12485	0.62	-1.7
2,503,274	+		A4249_RS12485	0.62	-0.5
2,503,274	+		A4249_RS12485	0.62	-0.7
2,503,274	+		A4249_RS12485	0.62	-0.1
2,503,274	+		A4249_RS12485	0.62	-0.1
2,503,274	+		A4249_RS12485	0.62	-0.3
2,503,274	+		A4249_RS12485	0.62	-0.2
2,503,274	+		A4249_RS12485	0.62	-0.2
2,503,274	+		A4249_RS12485	0.62	+0.1
2,503,274	+		A4249_RS12485	0.62	-0.6
2,503,275	-		A4249_RS12485	0.62	-0.2
2,503,275	-		A4249_RS12485	0.62	-0.5
2,503,275	-		A4249_RS12485	0.62	+0.5
2,503,275	-		A4249_RS12485	0.62	-0.1
2,503,275	-		A4249_RS12485	0.62	-0.0
2,503,275	-		A4249_RS12485	0.62	-0.6
2,503,275	-		A4249_RS12485	0.62	-0.8
2,503,275	-		A4249_RS12485	0.62	-0.7
2,503,275	-		A4249_RS12485	0.62	+0.0
2,503,275	-		A4249_RS12485	0.62	-0.9
2,503,275	-		A4249_RS12485	0.62	+0.6
2,503,275	-		A4249_RS12485	0.62	-1.1
2,503,275	-		A4249_RS12485	0.62	-1.1
2,503,275	-		A4249_RS12485	0.62	-0.5
2,503,275	-		A4249_RS12485	0.62	-0.5
2,503,275	-		A4249_RS12485	0.62	-0.7
2,503,298	+		A4249_RS12485	0.65	-0.2
2,503,298	+		A4249_RS12485	0.65	-0.2
2,503,298	+		A4249_RS12485	0.65	-0.9
2,503,298	+		A4249_RS12485	0.65	-0.4
2,503,299	-		A4249_RS12485	0.65	-0.1
2,503,299	-		A4249_RS12485	0.65	+0.8
2,503,319	+		A4249_RS12485	0.67	-0.4
2,503,319	+		A4249_RS12485	0.67	-1.0
2,503,320	-		A4249_RS12485	0.67	-0.0
2,503,320	-		A4249_RS12485	0.67	+0.2
2,503,320	-		A4249_RS12485	0.67	+1.5
2,503,682	-				-0.2
2,503,682	-				-0.8
2,503,720	+				-0.8
2,503,721	-				-0.8
2,503,954	+		A4249_RS12490	0.29	-0.9
2,503,954	+		A4249_RS12490	0.29	-1.1
2,503,954	+		A4249_RS12490	0.29	-0.4
2,503,954	+		A4249_RS12490	0.29	+1.8
2,503,955	-		A4249_RS12490	0.29	-1.5
2,503,955	-		A4249_RS12490	0.29	+0.7
2,503,955	-		A4249_RS12490	0.29	-0.1
2,503,955	-		A4249_RS12490	0.29	+0.8
2,503,955	-		A4249_RS12490	0.29	-0.0
2,503,969	+		A4249_RS12490	0.31	+0.1
2,503,969	+		A4249_RS12490	0.31	+0.1
2,503,969	+		A4249_RS12490	0.31	+0.4
2,503,969	+		A4249_RS12490	0.31	+1.2
2,503,969	+		A4249_RS12490	0.31	+0.7
2,503,969	+		A4249_RS12490	0.31	+1.1
2,503,970	-		A4249_RS12490	0.31	+0.5
2,503,970	-		A4249_RS12490	0.31	+0.1
2,503,970	-		A4249_RS12490	0.31	+0.5
2,504,075	-		A4249_RS12490	0.44	+0.4
2,504,075	-		A4249_RS12490	0.44	-0.2
2,504,188	+		A4249_RS12490	0.58	+0.6
2,504,188	+		A4249_RS12490	0.58	+1.0
2,504,188	+		A4249_RS12490	0.58	+0.7
2,504,188	+		A4249_RS12490	0.58	-0.4
2,504,188	+		A4249_RS12490	0.58	-0.4
2,504,189	-		A4249_RS12490	0.58	-0.9
2,504,189	-		A4249_RS12490	0.58	-0.9
2,504,189	-		A4249_RS12490	0.58	+1.7
2,504,212	+		A4249_RS12490	0.61	-0.5
2,504,213	-		A4249_RS12490	0.61	+0.2
2,504,213	-		A4249_RS12490	0.61	-0.7
2,504,308	+		A4249_RS12490	0.73	-0.6
2,504,309	-		A4249_RS12490	0.73	+0.2
2,504,309	-		A4249_RS12490	0.73	-0.3
2,504,309	-		A4249_RS12490	0.73	-0.7
2,504,309	-		A4249_RS12490	0.73	-0.1
2,504,320	+		A4249_RS12490	0.74	+0.7
2,504,321	-		A4249_RS12490	0.75	-0.7
2,504,321	-		A4249_RS12490	0.75	+0.3
2,504,321	-		A4249_RS12490	0.75	-0.0
2,504,321	-		A4249_RS12490	0.75	+0.2
2,504,509	+				-0.4
2,504,510	-				+1.1
2,504,510	-				+0.1
2,504,559	-				-0.5
2,504,802	+				+0.5
2,504,802	+				-0.0
2,504,802	+				-0.5
2,504,802	+				-0.3
2,504,802	+				-0.0
2,504,802	+				+0.3
2,504,802	+				+0.3
2,504,802	+				+0.3
2,504,802	+				+0.5
2,504,803	-				-0.3
2,504,803	-				-1.8
2,504,803	-				+0.1
2,504,803	-				+0.9
2,504,803	-				-0.8
2,504,803	-				+1.1
2,504,803	-				+1.8
2,504,803	-				-0.3
2,504,806	+				-0.4
2,504,806	+				+1.5
2,504,806	+				-0.1
2,504,806	+				-0.2
2,504,806	+				-0.7
2,504,807	-				+0.7
2,504,807	-				-1.5
2,504,807	-				+0.0
2,504,807	-				+0.5
2,504,807	-				+0.1
2,504,807	-				+0.8
2,504,807	-				+0.9
2,504,807	-				+0.3
2,504,911	+		A4249_RS12495	0.24	+1.0
2,504,911	+		A4249_RS12495	0.24	-0.1
2,504,911	+		A4249_RS12495	0.24	+0.2
2,504,911	+		A4249_RS12495	0.24	+0.9
2,504,911	+		A4249_RS12495	0.24	+0.5
2,504,911	+		A4249_RS12495	0.24	-0.5
2,504,911	+		A4249_RS12495	0.24	-1.4
2,504,911	+		A4249_RS12495	0.24	-0.2
2,504,911	+		A4249_RS12495	0.24	-0.2
2,504,912	-		A4249_RS12495	0.24	+0.1
2,504,912	-		A4249_RS12495	0.24	-0.0
2,504,912	-		A4249_RS12495	0.24	+1.1
2,504,912	-		A4249_RS12495	0.24	-1.2
2,504,912	-		A4249_RS12495	0.24	-0.8
2,504,912	-		A4249_RS12495	0.24	+0.5
2,505,064	+		A4249_RS12495	0.56	-0.0
2,505,064	+		A4249_RS12495	0.56	+0.6
2,505,064	+		A4249_RS12495	0.56	+0.7
2,505,064	+		A4249_RS12495	0.56	+0.3
2,505,064	+		A4249_RS12495	0.56	-0.3
2,505,064	+		A4249_RS12495	0.56	-0.3
2,505,064	+		A4249_RS12495	0.56	+1.2
2,505,064	+		A4249_RS12495	0.56	-0.7
2,505,064	+		A4249_RS12495	0.56	+1.5
2,505,065	-		A4249_RS12495	0.56	-0.5
2,505,065	-		A4249_RS12495	0.56	-1.1
2,505,065	-		A4249_RS12495	0.56	+0.4
2,505,065	-		A4249_RS12495	0.56	-0.2
2,505,065	-		A4249_RS12495	0.56	-1.2
2,505,065	-		A4249_RS12495	0.56	-1.2
2,505,121	+		A4249_RS12495	0.68	-0.6
2,505,121	+		A4249_RS12495	0.68	-1.3
2,505,121	+		A4249_RS12495	0.68	-0.6
2,505,121	+		A4249_RS12495	0.68	-0.4
2,505,122	-		A4249_RS12495	0.68	+0.2
2,505,122	-		A4249_RS12495	0.68	-0.5
2,505,122	-		A4249_RS12495	0.68	-1.0
2,505,122	-		A4249_RS12495	0.68	+0.9
2,505,122	-		A4249_RS12495	0.68	+0.1
2,505,122	-		A4249_RS12495	0.68	+0.5
2,505,274	+				+0.1
2,505,274	+				+0.6
2,505,294	+				-0.6
2,505,294	+				-0.7
2,505,295	-				-1.5
2,505,295	-				-0.9
2,505,295	-				+0.3